RNA–Protein interactions for RNA: ENST00000597828.5

SOX2-OT-228, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 864 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-228ENST00000597828 TRPM5Q9NZQ8 1165 aa12.9□□□□□ -0.34
SOX2-OT-228ENST00000597828 NXF1Q9UBU9 619 aaKnown RBP12.9□□□□□ -0.34
SOX2-OT-228ENST00000597828 CPQQ9Y646 472 aa12.9□□□□□ -0.34
SOX2-OT-228ENST00000597828 PCDH15Q96QU1 1955 aa12.9□□□□□ -0.34
SOX2-OT-228ENST00000597828 CKAP5Q14008 2032 aa12.89□□□□□ -0.35
SOX2-OT-228ENST00000597828 ZNF840PA6NDX5 716 aa12.89□□□□□ -0.35
SOX2-OT-228ENST00000597828 K7EQS6 105 aa12.89□□□□□ -0.35
SOX2-OT-228ENST00000597828 TRIM66O15016 1216 aa12.89□□□□□ -0.35
SOX2-OT-228ENST00000597828 TACC1O75410 805 aa12.89□□□□□ -0.35
SOX2-OT-228ENST00000597828 YEATS4O95619 227 aa12.89□□□□□ -0.35
SOX2-OT-228ENST00000597828 NFATC1O95644 943 aa12.89□□□□□ -0.35
SOX2-OT-228ENST00000597828 OLFM2O95897 454 aa12.89□□□□□ -0.35
SOX2-OT-228ENST00000597828 OAS1P00973 400 aaKnown RBP12.89□□□□□ -0.35
SOX2-OT-228ENST00000597828 ZNF806P0C7X5 589 aa12.89□□□□□ -0.35
SOX2-OT-228ENST00000597828 HNRNPLP14866 589 aaKnown RBP eCLIP12.89□□□□□ -0.35
SOX2-OT-228ENST00000597828 PTPN1P18031 435 aaKnown RBP12.89□□□□□ -0.35
SOX2-OT-228ENST00000597828 GNL1P36915 607 aaPredicted RBP12.89□□□□□ -0.35
SOX2-OT-228ENST00000597828 AFMP43652 599 aa12.89□□□□□ -0.35
SOX2-OT-228ENST00000597828 CDH8P55286 799 aa12.89□□□□□ -0.35
SOX2-OT-228ENST00000597828 TNNC1P63316 161 aa12.89□□□□□ -0.35
SOX2-OT-228ENST00000597828 TAF10Q12962 218 aa12.89□□□□□ -0.35
SOX2-OT-228ENST00000597828 MAPRE1Q15691 268 aaKnown RBP12.89□□□□□ -0.35
SOX2-OT-228ENST00000597828 FBXO43Q4G163 708 aa12.89□□□□□ -0.35
SOX2-OT-228ENST00000597828 C2orf27AQ580R0 203 aa12.89□□□□□ -0.35
SOX2-OT-228ENST00000597828 PLA2G2CQ5R387 149 aa12.89□□□□□ -0.35
SOX2-OT-228ENST00000597828 CNNM4Q6P4Q7 775 aa12.89□□□□□ -0.35
SOX2-OT-228ENST00000597828 CCDC33Q8N5R6 958 aa12.89□□□□□ -0.35
SOX2-OT-228ENST00000597828 CAMKK1Q8N5S9 505 aa12.89□□□□□ -0.35
SOX2-OT-228ENST00000597828 IQUBQ8NA54 791 aa12.89□□□□□ -0.35
SOX2-OT-228ENST00000597828 LOXL4Q96JB6 756 aa12.89□□□□□ -0.35
SOX2-OT-228ENST00000597828 ZNF396Q96N95 335 aaPredicted RBP12.89□□□□□ -0.35
SOX2-OT-228ENST00000597828 B3GNT5Q9BYG0 378 aa12.89□□□□□ -0.35
SOX2-OT-228ENST00000597828 LRRC27Q9C0I9 530 aa12.89□□□□□ -0.35
SOX2-OT-228ENST00000597828 SDCBP2Q9H190 292 aa12.89□□□□□ -0.35
SOX2-OT-228ENST00000597828 XYLT2Q9H1B5 865 aa12.89□□□□□ -0.35
SOX2-OT-228ENST00000597828 KIAA1586Q9HCI6 787 aa12.89□□□□□ -0.35
SOX2-OT-228ENST00000597828 A8MXQ7 604 aa12.88□□□□□ -0.35
SOX2-OT-228ENST00000597828 AKAP3O75969 853 aa12.88□□□□□ -0.35
SOX2-OT-228ENST00000597828 CLSTN1O94985 981 aa12.88□□□□□ -0.35
SOX2-OT-228ENST00000597828 APBB3O95704 486 aa12.88□□□□□ -0.35
SOX2-OT-228ENST00000597828 BCKDHBP21953 392 aa12.88□□□□□ -0.35
SOX2-OT-228ENST00000597828 SLC6A11P48066 632 aa12.88□□□□□ -0.35
SOX2-OT-228ENST00000597828 DGKEP52429 567 aa12.88□□□□□ -0.35
SOX2-OT-228ENST00000597828 NOP14P78316 857 aaKnown RBP12.88□□□□□ -0.35
SOX2-OT-228ENST00000597828 SLC7A9P82251 487 aa12.88□□□□□ -0.35
SOX2-OT-228ENST00000597828 AMPD3Q01432 767 aa12.88□□□□□ -0.35
SOX2-OT-228ENST00000597828 ORC1Q13415 861 aa12.88□□□□□ -0.35
SOX2-OT-228ENST00000597828 PKP1Q13835 747 aa12.88□□□□□ -0.35
SOX2-OT-228ENST00000597828 TDRD10Q5VZ19 366 aaKnown RBP12.88□□□□□ -0.35
SOX2-OT-228ENST00000597828 IL31Q6EBC2 164 aa12.88□□□□□ -0.35
SOX2-OT-228ENST00000597828 ANO7Q6IWH7 933 aa12.88□□□□□ -0.35
SOX2-OT-228ENST00000597828 B3GALNT2Q8NCR0 500 aa12.88□□□□□ -0.35
SOX2-OT-228ENST00000597828 USP33Q8TEY7 942 aa12.88□□□□□ -0.35
SOX2-OT-228ENST00000597828 ACDQ96AP0 544 aa12.88□□□□□ -0.35
SOX2-OT-228ENST00000597828 ZC3H10Q96K80 434 aaKnown RBP12.88□□□□□ -0.35
SOX2-OT-228ENST00000597828 C8orf48Q96LL4 319 aa12.88□□□□□ -0.35
SOX2-OT-228ENST00000597828 KCNK16Q96T55 309 aa12.88□□□□□ -0.35
SOX2-OT-228ENST00000597828 CFAP97Q9P2B7 532 aa12.88□□□□□ -0.35
SOX2-OT-228ENST00000597828 PCDHA7Q9UN72 937 aa12.88□□□□□ -0.35
SOX2-OT-228ENST00000597828 CHD8Q9HCK8 2581 aa12.88□□□□□ -0.35
SOX2-OT-228ENST00000597828 PCNX2A6NKB5 2137 aa12.88□□□□□ -0.35
SOX2-OT-228ENST00000597828 LRRIQ3A6PVS8 624 aaPredicted RBP12.87□□□□□ -0.35
SOX2-OT-228ENST00000597828 TM4SF5O14894 197 aa12.87□□□□□ -0.35
SOX2-OT-228ENST00000597828 F13A1P00488 732 aa12.87□□□□□ -0.35
SOX2-OT-228ENST00000597828 MBL2P11226 248 aaPredicted RBP12.87□□□□□ -0.35
SOX2-OT-228ENST00000597828 CHRM1P11229 460 aaPredicted RBP12.87□□□□□ -0.35
SOX2-OT-228ENST00000597828 GBP1P32455 592 aa12.87□□□□□ -0.35
SOX2-OT-228ENST00000597828 LIMK1P53667 647 aa12.87□□□□□ -0.35
SOX2-OT-228ENST00000597828 CREB5Q02930 508 aa12.87□□□□□ -0.35
SOX2-OT-228ENST00000597828 KDSRQ06136 332 aa12.87□□□□□ -0.35
SOX2-OT-228ENST00000597828 NR1H3Q13133 447 aa12.87□□□□□ -0.35
SOX2-OT-228ENST00000597828 TRPC3Q13507 836 aa12.87□□□□□ -0.35
SOX2-OT-228ENST00000597828 DHCR24Q15392 516 aa12.87□□□□□ -0.35
SOX2-OT-228ENST00000597828 BMT2Q1RMZ1 405 aa12.87□□□□□ -0.35
SOX2-OT-228ENST00000597828 STPG1Q5TH74 334 aa12.87□□□□□ -0.35
SOX2-OT-228ENST00000597828 TMEM92Q6UXU6 159 aa12.87□□□□□ -0.35
SOX2-OT-228ENST00000597828 PAQR9Q6ZVX9 377 aa12.87□□□□□ -0.35
SOX2-OT-228ENST00000597828 FAM35AQ86V20 835 aa12.87□□□□□ -0.35
SOX2-OT-228ENST00000597828 TTC30AQ86WT1 665 aa12.87□□□□□ -0.35
SOX2-OT-228ENST00000597828 KIAA0895Q8NCT3 520 aa12.87□□□□□ -0.35
SOX2-OT-228ENST00000597828 MDGA1Q8NFP4 955 aa12.87□□□□□ -0.35
SOX2-OT-228ENST00000597828 TSTD1Q8NFU3 115 aa12.87□□□□□ -0.35
SOX2-OT-228ENST00000597828 WBP2Q969T9 261 aa12.87□□□□□ -0.35
SOX2-OT-228ENST00000597828 ZFRQ96KR1 1074 aaKnown RBP12.87□□□□□ -0.35
SOX2-OT-228ENST00000597828 ELOVL4Q9GZR5 314 aa12.87□□□□□ -0.35
SOX2-OT-228ENST00000597828 HMGXB4Q9UGU5 601 aa12.87□□□□□ -0.35
SOX2-OT-228ENST00000597828 SERTAD1Q9UHV2 236 aa12.87□□□□□ -0.35
SOX2-OT-228ENST00000597828 EPG5Q9HCE0 2579 aa12.87□□□□□ -0.35
SOX2-OT-228ENST00000597828 USP24Q9UPU5 2620 aa12.86□□□□□ -0.35
SOX2-OT-228ENST00000597828 KLRC4O43908 158 aa12.86□□□□□ -0.35
SOX2-OT-228ENST00000597828 EXOC3O60645 756 aa12.86□□□□□ -0.35
SOX2-OT-228ENST00000597828 PHACTR2O75167 634 aa12.86□□□□□ -0.35
SOX2-OT-228ENST00000597828 VNN1O95497 513 aa12.86□□□□□ -0.35
SOX2-OT-228ENST00000597828 STAU1O95793 577 aaKnown RBP12.86□□□□□ -0.35
SOX2-OT-228ENST00000597828 CCDC130P13994 396 aa12.86□□□□□ -0.35
SOX2-OT-228ENST00000597828 TIE1P35590 1138 aa12.86□□□□□ -0.35
SOX2-OT-228ENST00000597828 PDE6CP51160 858 aa12.86□□□□□ -0.35
SOX2-OT-228ENST00000597828 DLG4P78352 724 aa12.86□□□□□ -0.35
SOX2-OT-228ENST00000597828 BIRC3Q13489 604 aa12.86□□□□□ -0.35
SOX2-OT-228ENST00000597828 KNOP1Q1ED39 458 aaKnown RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms