RNA–Protein interactions for RNA: ENST00000595101.5

USE1-206, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2 BASIC

Gene USE1, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-206ENST00000595101 APEX2Q9UBZ4 518 aa16.26■□□□□ 0.19
USE1-206ENST00000595101 TSPAN16Q9UKR8 245 aa16.26■□□□□ 0.19
USE1-206ENST00000595101 TMEM221A6NGB7 291 aa16.26■□□□□ 0.19
USE1-206ENST00000595101 BECN2A8MW95 431 aa16.26■□□□□ 0.19
USE1-206ENST00000595101 M0R296 226 aa16.26■□□□□ 0.19
USE1-206ENST00000595101 SRFP11831 508 aa16.26■□□□□ 0.19
USE1-206ENST00000595101 NPR3P17342 541 aa16.26■□□□□ 0.19
USE1-206ENST00000595101 YWHAQP27348 245 aa16.26■□□□□ 0.19
USE1-206ENST00000595101 ZNF132P52740 706 aa16.26■□□□□ 0.19
USE1-206ENST00000595101 YWHAEP62258 255 aaKnown RBP16.26■□□□□ 0.19
USE1-206ENST00000595101 SGO2Q562F6 1265 aa16.26■□□□□ 0.19
USE1-206ENST00000595101 APTXQ7Z2E3 356 aaKnown RBP16.26■□□□□ 0.19
USE1-206ENST00000595101 MON1AQ86VX9 555 aa16.26■□□□□ 0.19
USE1-206ENST00000595101 FBXO32Q969P5 355 aa16.26■□□□□ 0.19
USE1-206ENST00000595101 ZFYVE19Q96K21 471 aa16.26■□□□□ 0.19
USE1-206ENST00000595101 CEP295NLQ96MC4 621 aa16.26■□□□□ 0.19
USE1-206ENST00000595101 LRFN3Q9BTN0 628 aa16.26■□□□□ 0.19
USE1-206ENST00000595101 RNF38Q9H0F5 515 aa16.26■□□□□ 0.19
USE1-206ENST00000595101 GMIPQ9P107 970 aa16.26■□□□□ 0.19
USE1-206ENST00000595101 CA14Q9ULX7 337 aa16.26■□□□□ 0.19
USE1-206ENST00000595101 COL4A3Q01955 1670 aa16.25■□□□□ 0.19
USE1-206ENST00000595101 KRBA1A5PL33 1030 aa16.25■□□□□ 0.19
USE1-206ENST00000595101 O00370 1275 aa16.25■□□□□ 0.19
USE1-206ENST00000595101 GPR37L1O60883 481 aa16.25■□□□□ 0.19
USE1-206ENST00000595101 KRT5P13647 590 aa16.25■□□□□ 0.19
USE1-206ENST00000595101 NFKBIBQ15653 356 aa16.25■□□□□ 0.19
USE1-206ENST00000595101 ZSCAN23Q3MJ62 389 aa16.25■□□□□ 0.19
USE1-206ENST00000595101 ANKRD52Q8NB46 1076 aa16.25■□□□□ 0.19
USE1-206ENST00000595101 TTC16Q8NEE8 873 aa16.25■□□□□ 0.19
USE1-206ENST00000595101 FAM124BQ9H5Z6 455 aaPredicted RBP16.25■□□□□ 0.19
USE1-206ENST00000595101 DNAJC12Q9UKB3 198 aa16.25■□□□□ 0.19
USE1-206ENST00000595101 CNTN6Q9UQ52 1028 aa16.25■□□□□ 0.19
USE1-206ENST00000595101 FAM92AA1XBS5 289 aa16.24■□□□□ 0.19
USE1-206ENST00000595101 CYP26A1O43174 497 aa16.24■□□□□ 0.19
USE1-206ENST00000595101 VDRP11473 427 aa16.24■□□□□ 0.19
USE1-206ENST00000595101 AVPR1AP37288 418 aa16.24■□□□□ 0.19
USE1-206ENST00000595101 ZNF165P49910 485 aa16.24■□□□□ 0.19
USE1-206ENST00000595101 COPB1P53618 953 aaKnown RBP16.24■□□□□ 0.19
USE1-206ENST00000595101 PDE4CQ08493 712 aa16.24■□□□□ 0.19
USE1-206ENST00000595101 TMEM31Q5JXX7 168 aa16.24■□□□□ 0.19
USE1-206ENST00000595101 SIX5Q8N196 739 aa16.24■□□□□ 0.19
USE1-206ENST00000595101 NDRG1Q92597 394 aaKnown RBP16.24■□□□□ 0.19
USE1-206ENST00000595101 C1QTNF1Q9BXJ1 281 aa16.24■□□□□ 0.19
USE1-206ENST00000595101 OSER1Q9NX31 292 aa16.24■□□□□ 0.19
USE1-206ENST00000595101 TRPM5Q9NZQ8 1165 aa16.24■□□□□ 0.19
USE1-206ENST00000595101 GABBR2O75899 941 aa16.23■□□□□ 0.19
USE1-206ENST00000595101 RTN3O95197 1032 aaPredicted RBP16.23■□□□□ 0.19
USE1-206ENST00000595101 PAEPP09466 180 aa16.23■□□□□ 0.19
USE1-206ENST00000595101 PSMC3P17980 439 aa16.23■□□□□ 0.19
USE1-206ENST00000595101 TRIM21P19474 475 aaKnown RBP16.23■□□□□ 0.19
USE1-206ENST00000595101 MFAP3P55082 362 aa16.23■□□□□ 0.19
USE1-206ENST00000595101 IQCB1Q15051 598 aa16.23■□□□□ 0.19
USE1-206ENST00000595101 PKDCCQ504Y2 493 aa16.23■□□□□ 0.19
USE1-206ENST00000595101 PIGZQ86VD9 579 aa16.23■□□□□ 0.19
USE1-206ENST00000595101 MFSD6LQ8IWD5 586 aa16.23■□□□□ 0.19
USE1-206ENST00000595101 BPIFA3Q9BQP9 254 aa16.23■□□□□ 0.19
USE1-206ENST00000595101 TRMT61BQ9BVS5 477 aaKnown RBP16.23■□□□□ 0.19
USE1-206ENST00000595101 LSM14BQ9BX40 385 aaKnown RBP16.23■□□□□ 0.19
USE1-206ENST00000595101 LIMA1Q9UHB6 759 aaKnown RBP16.23■□□□□ 0.19
USE1-206ENST00000595101 FBXL21Q9UKT6 434 aa16.23■□□□□ 0.19
USE1-206ENST00000595101 FHOD1Q9Y613 1164 aa16.23■□□□□ 0.19
USE1-206ENST00000595101 GREB1Q4ZG55 1949 aa16.23■□□□□ 0.19
USE1-206ENST00000595101 FOXN3O00409 490 aaPredicted RBP16.23■□□□□ 0.19
USE1-206ENST00000595101 EPHB6O15197 1021 aa16.23■□□□□ 0.19
USE1-206ENST00000595101 HDCP19113 662 aa16.23■□□□□ 0.19
USE1-206ENST00000595101 CDK11BP21127 795 aaKnown RBP16.23■□□□□ 0.19
USE1-206ENST00000595101 GDI1P31150 447 aa16.23■□□□□ 0.19
USE1-206ENST00000595101 USP8P40818 1118 aa16.23■□□□□ 0.19
USE1-206ENST00000595101 KIF11P52732 1056 aa16.23■□□□□ 0.19
USE1-206ENST00000595101 KLHDC7AQ5VTJ3 777 aa16.23■□□□□ 0.19
USE1-206ENST00000595101 PBXIP1Q96AQ6 731 aa16.23■□□□□ 0.19
USE1-206ENST00000595101 SLITRK1Q96PX8 696 aa16.23■□□□□ 0.19
USE1-206ENST00000595101 CCSER2Q9H7U1 834 aa16.23■□□□□ 0.19
USE1-206ENST00000595101 NMUR1Q9HB89 426 aa16.23■□□□□ 0.19
USE1-206ENST00000595101 SLC2A4RGQ9NR83 387 aa16.23■□□□□ 0.19
USE1-206ENST00000595101 TDP1Q9NUW8 608 aa16.23■□□□□ 0.19
USE1-206ENST00000595101 LRRC10BA6NIK2 292 aa16.22■□□□□ 0.19
USE1-206ENST00000595101 PIK3R2O00459 728 aa16.22■□□□□ 0.19
USE1-206ENST00000595101 DPYSL4O14531 572 aa16.22■□□□□ 0.19
USE1-206ENST00000595101 SCAMP3O14828 347 aaKnown RBP16.22■□□□□ 0.19
USE1-206ENST00000595101 LETM1O95202 739 aaPredicted RBP16.22■□□□□ 0.19
USE1-206ENST00000595101 TBX18O95935 607 aa16.22■□□□□ 0.19
USE1-206ENST00000595101 OAS1P00973 400 aaKnown RBP16.22■□□□□ 0.19
USE1-206ENST00000595101 CKMP06732 381 aa16.22■□□□□ 0.19
USE1-206ENST00000595101 ZDHHC11BP0C7U3 371 aa16.22■□□□□ 0.19
USE1-206ENST00000595101 PTMSP20962 102 aa16.22■□□□□ 0.19
USE1-206ENST00000595101 CD72P21854 359 aa16.22■□□□□ 0.19
USE1-206ENST00000595101 DDX6P26196 483 aaKnown RBP eCLIP16.22■□□□□ 0.19
USE1-206ENST00000595101 LCLAT1Q6UWP7 414 aa16.22■□□□□ 0.19
USE1-206ENST00000595101 LUZP1Q86V48 1076 aa16.22■□□□□ 0.19
USE1-206ENST00000595101 TTC8Q8TAM2 541 aa16.22■□□□□ 0.19
USE1-206ENST00000595101 SHC3Q92529 594 aa16.22■□□□□ 0.19
USE1-206ENST00000595101 NAT10Q9H0A0 1025 aaKnown RBP16.22■□□□□ 0.19
USE1-206ENST00000595101 CBX8Q9HC52 389 aa16.22■□□□□ 0.19
USE1-206ENST00000595101 HEBP1Q9NRV9 189 aa16.22■□□□□ 0.19
USE1-206ENST00000595101 SMPD4Q9NXE4 827 aa16.22■□□□□ 0.19
USE1-206ENST00000595101 NUDT5Q9UKK9 219 aa16.22■□□□□ 0.19
USE1-206ENST00000595101 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.22■□□□□ 0.19
USE1-206ENST00000595101 USP3Q9Y6I4 520 aa16.22■□□□□ 0.19
USE1-206ENST00000595101 TRAV19A0A0A6YYK7 116 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms