RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 SLC27A1Q6PCB7 646 aa17.88■□□□□ 0.45
SHKBP1-205ENST00000594973 TAOK1Q7L7X3 1001 aa17.88■□□□□ 0.45
SHKBP1-205ENST00000594973 SPATA21Q7Z572 469 aa17.88■□□□□ 0.45
SHKBP1-205ENST00000594973 KIF2BQ8N4N8 673 aa17.88■□□□□ 0.45
SHKBP1-205ENST00000594973 FAM81AQ8TBF8 368 aa17.88■□□□□ 0.45
SHKBP1-205ENST00000594973 RUNDC3BQ96NL0 473 aa17.88■□□□□ 0.45
SHKBP1-205ENST00000594973 APOL6Q9BWW8 343 aa17.88■□□□□ 0.45
SHKBP1-205ENST00000594973 VCXQ9H320 206 aa17.88■□□□□ 0.45
SHKBP1-205ENST00000594973 M0QYV0 167 aa17.88■□□□□ 0.45
SHKBP1-205ENST00000594973 KRT10P13645 584 aa17.88■□□□□ 0.45
SHKBP1-205ENST00000594973 RFC1P35251 1148 aaPredicted RBP17.88■□□□□ 0.45
SHKBP1-205ENST00000594973 NDST1P52848 882 aa17.88■□□□□ 0.45
SHKBP1-205ENST00000594973 PSMC1P62191 440 aaKnown RBP17.88■□□□□ 0.45
SHKBP1-205ENST00000594973 CCDC15Q0P6D6 951 aa17.88■□□□□ 0.45
SHKBP1-205ENST00000594973 DCAF4L1Q3SXM0 396 aa17.88■□□□□ 0.45
SHKBP1-205ENST00000594973 TNFAIP8L3Q5GJ75 292 aa17.88■□□□□ 0.45
SHKBP1-205ENST00000594973 TXNRD3NBQ6F5E7 133 aa17.88■□□□□ 0.45
SHKBP1-205ENST00000594973 EXD1Q8NHP7 514 aa17.88■□□□□ 0.45
SHKBP1-205ENST00000594973 CFAP61Q8NHU2 1237 aa17.88■□□□□ 0.45
SHKBP1-205ENST00000594973 ZMAT2Q96NC0 199 aaKnown RBP17.88■□□□□ 0.45
SHKBP1-205ENST00000594973 TRAPPC9Q96Q05 1148 aa17.88■□□□□ 0.45
SHKBP1-205ENST00000594973 TRIM4Q9C037 500 aa17.88■□□□□ 0.45
SHKBP1-205ENST00000594973 LHX5Q9H2C1 402 aa17.88■□□□□ 0.45
SHKBP1-205ENST00000594973 STRIP2Q9ULQ0 834 aa17.88■□□□□ 0.45
SHKBP1-205ENST00000594973 TREHO43280 583 aa17.87■□□□□ 0.45
SHKBP1-205ENST00000594973 MICAL2O94851 1124 aa17.87■□□□□ 0.45
SHKBP1-205ENST00000594973 SHBGP04278 402 aa17.87■□□□□ 0.45
SHKBP1-205ENST00000594973 KRT3P12035 628 aa17.87■□□□□ 0.45
SHKBP1-205ENST00000594973 ATF7P17544 494 aaPredicted RBP17.87■□□□□ 0.45
SHKBP1-205ENST00000594973 KLF1Q13351 362 aaPredicted RBP17.87■□□□□ 0.45
SHKBP1-205ENST00000594973 TRIM68Q6AZZ1 485 aa17.87■□□□□ 0.45
SHKBP1-205ENST00000594973 CHADLQ6NUI6 762 aa17.87■□□□□ 0.45
SHKBP1-205ENST00000594973 UBA3Q8TBC4 463 aa17.87■□□□□ 0.45
SHKBP1-205ENST00000594973 SH3TC2Q8TF17 1288 aa17.87■□□□□ 0.45
SHKBP1-205ENST00000594973 MAIP1Q8WWC4 291 aa17.87■□□□□ 0.45
SHKBP1-205ENST00000594973 DCLK3Q9C098 648 aa17.87■□□□□ 0.45
SHKBP1-205ENST00000594973 NXF3Q9H4D5 531 aaKnown RBP17.87■□□□□ 0.45
SHKBP1-205ENST00000594973 VRTNQ9H8Y1 702 aa17.87■□□□□ 0.45
SHKBP1-205ENST00000594973 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.87■□□□□ 0.45
SHKBP1-205ENST00000594973 SMIM35A0A1B0GVV1 85 aa17.87■□□□□ 0.45
SHKBP1-205ENST00000594973 MANSC4A6NHS7 340 aaPredicted RBP17.87■□□□□ 0.45
SHKBP1-205ENST00000594973 PPEF2O14830 753 aa17.87■□□□□ 0.45
SHKBP1-205ENST00000594973 KRT1P04264 644 aa17.87■□□□□ 0.45
SHKBP1-205ENST00000594973 AKAP5P24588 427 aa17.87■□□□□ 0.45
SHKBP1-205ENST00000594973 NFX1Q12986 1120 aaKnown RBP17.87■□□□□ 0.45
SHKBP1-205ENST00000594973 TSNAXIP1Q2TAA8 658 aa17.87■□□□□ 0.45
SHKBP1-205ENST00000594973 NOTUMQ6P988 496 aa17.87■□□□□ 0.45
SHKBP1-205ENST00000594973 EMC1Q8N766 993 aa17.87■□□□□ 0.45
SHKBP1-205ENST00000594973 JOSD2Q8TAC2 188 aa17.87■□□□□ 0.45
SHKBP1-205ENST00000594973 TMEM40Q8WWA1 233 aa17.87■□□□□ 0.45
SHKBP1-205ENST00000594973 SYT15Q9BQS2 421 aa17.87■□□□□ 0.45
SHKBP1-205ENST00000594973 CYP3A43Q9HB55 503 aa17.87■□□□□ 0.45
SHKBP1-205ENST00000594973 TUBGCP4Q9UGJ1 667 aa17.87■□□□□ 0.45
SHKBP1-205ENST00000594973 ASIC3Q9UHC3 531 aa17.87■□□□□ 0.45
SHKBP1-205ENST00000594973 MBLAC1A4D2B0 266 aaPredicted RBP17.86■□□□□ 0.45
SHKBP1-205ENST00000594973 PIK3R2O00459 728 aa17.86■□□□□ 0.45
SHKBP1-205ENST00000594973 ATP5HO75947 161 aa17.86■□□□□ 0.45
SHKBP1-205ENST00000594973 ERBB2P04626 1255 aa17.86■□□□□ 0.45
SHKBP1-205ENST00000594973 DARSP14868 501 aaKnown RBP17.86■□□□□ 0.45
SHKBP1-205ENST00000594973 PSMA2P25787 234 aa17.86■□□□□ 0.45
SHKBP1-205ENST00000594973 VPS41P49754 854 aa17.86■□□□□ 0.45
SHKBP1-205ENST00000594973 PSEN2P49810 448 aa17.86■□□□□ 0.45
SHKBP1-205ENST00000594973 ENDOVQ8N8Q3 282 aaKnown RBP17.86■□□□□ 0.45
SHKBP1-205ENST00000594973 KCNV2Q8TDN2 545 aa17.86■□□□□ 0.45
SHKBP1-205ENST00000594973 STK32AQ8WU08 396 aa17.86■□□□□ 0.45
SHKBP1-205ENST00000594973 C18orf25Q96B23 403 aaPredicted RBP17.86■□□□□ 0.45
SHKBP1-205ENST00000594973 RBM41Q96IZ5 413 aaKnown RBP17.86■□□□□ 0.45
SHKBP1-205ENST00000594973 AP5M1Q9H0R1 490 aa17.86■□□□□ 0.45
SHKBP1-205ENST00000594973 PRKAG3Q9UGI9 489 aa17.86■□□□□ 0.45
SHKBP1-205ENST00000594973 BARX2Q9UMQ3 279 aaPredicted RBP17.86■□□□□ 0.45
SHKBP1-205ENST00000594973 GSTA2P09210 222 aa17.86■□□□□ 0.45
SHKBP1-205ENST00000594973 CPT1AP50416 773 aa17.86■□□□□ 0.45
SHKBP1-205ENST00000594973 YARSP54577 528 aaKnown RBP17.86■□□□□ 0.45
SHKBP1-205ENST00000594973 TAP1Q03518 808 aa17.86■□□□□ 0.45
SHKBP1-205ENST00000594973 PIGHQ14442 188 aaPredicted RBP17.86■□□□□ 0.45
SHKBP1-205ENST00000594973 C17orf99Q6UX52 265 aa17.86■□□□□ 0.45
SHKBP1-205ENST00000594973 MFSD7Q6UXD7 560 aa17.86■□□□□ 0.45
SHKBP1-205ENST00000594973 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.86■□□□□ 0.45
SHKBP1-205ENST00000594973 C12orf29Q8N999 325 aa17.86■□□□□ 0.45
SHKBP1-205ENST00000594973 METTL5Q9NRN9 209 aaKnown RBP17.86■□□□□ 0.45
SHKBP1-205ENST00000594973 MTRF1LQ9UGC7 380 aaKnown RBP17.86■□□□□ 0.45
SHKBP1-205ENST00000594973 PARP2Q9UGN5 583 aa17.86■□□□□ 0.45
SHKBP1-205ENST00000594973 PIN4Q9Y237 131 aaKnown RBP17.86■□□□□ 0.45
SHKBP1-205ENST00000594973 SNX9Q9Y5X1 595 aa17.86■□□□□ 0.45
SHKBP1-205ENST00000594973 RPS6KL1Q9Y6S9 549 aa17.86■□□□□ 0.45
SHKBP1-205ENST00000594973 TNPO2O14787 897 aaKnown RBP17.85■□□□□ 0.45
SHKBP1-205ENST00000594973 COQ9O75208 318 aa17.85■□□□□ 0.45
SHKBP1-205ENST00000594973 UNC5CO95185 931 aa17.85■□□□□ 0.45
SHKBP1-205ENST00000594973 SP100P23497 879 aaPredicted RBP17.85■□□□□ 0.45
SHKBP1-205ENST00000594973 IFI35P80217 286 aaPredicted RBP17.85■□□□□ 0.45
SHKBP1-205ENST00000594973 CALCOCO2Q13137 446 aa17.85■□□□□ 0.45
SHKBP1-205ENST00000594973 RNF43Q68DV7 783 aa17.85■□□□□ 0.45
SHKBP1-205ENST00000594973 IRGCQ6NXR0 463 aa17.85■□□□□ 0.45
SHKBP1-205ENST00000594973 CCDC25Q86WR0 208 aa17.85■□□□□ 0.45
SHKBP1-205ENST00000594973 IFNL1Q8IU54 200 aa17.85■□□□□ 0.45
SHKBP1-205ENST00000594973 SNX27Q96L92 541 aa17.85■□□□□ 0.45
SHKBP1-205ENST00000594973 SLITRK1Q96PX8 696 aa17.85■□□□□ 0.45
SHKBP1-205ENST00000594973 TXLNGQ9NUQ3 528 aa17.85■□□□□ 0.45
SHKBP1-205ENST00000594973 RGS2P41220 211 aa17.84■□□□□ 0.45
SHKBP1-205ENST00000594973 CDC42EP1Q00587 391 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms