RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 FSTL4Q6MZW2 842 aa24.93■■□□□ 1.58
LSM4-204ENST00000594828 UNC93AQ86WB7 457 aa24.93■■□□□ 1.58
LSM4-204ENST00000594828 SMYD4Q8IYR2 804 aaPredicted RBP24.93■■□□□ 1.58
LSM4-204ENST00000594828 CRYBG2Q8N1P7 616 aa24.93■■□□□ 1.58
LSM4-204ENST00000594828 DCLK2Q8N568 766 aa24.93■■□□□ 1.58
LSM4-204ENST00000594828 EXOC4Q96A65 974 aa24.93■■□□□ 1.58
LSM4-204ENST00000594828 SMARCD1Q96GM5 515 aa24.93■■□□□ 1.58
LSM4-204ENST00000594828 IMPG2Q9BZV3 1241 aa24.93■■□□□ 1.58
LSM4-204ENST00000594828 RNF38Q9H0F5 515 aa24.93■■□□□ 1.58
LSM4-204ENST00000594828 UTP3Q9NQZ2 479 aaKnown RBP eCLIP24.93■■□□□ 1.581e-9■■■■■ 58
LSM4-204ENST00000594828 RMND1Q9NWS8 449 aa24.93■■□□□ 1.58
LSM4-204ENST00000594828 FAM186AA6NE01 2351 aa24.93■■□□□ 1.58
LSM4-204ENST00000594828 PAPSS2O95340 614 aaPredicted RBP24.92■■□□□ 1.58
LSM4-204ENST00000594828 ASPAP45381 313 aa24.92■■□□□ 1.58
LSM4-204ENST00000594828 GALK1P51570 392 aa24.92■■□□□ 1.58
LSM4-204ENST00000594828 SLC7A9P82251 487 aa24.92■■□□□ 1.58
LSM4-204ENST00000594828 ZXDBP98169 803 aa24.92■■□□□ 1.58
LSM4-204ENST00000594828 NR1H3Q13133 447 aa24.92■■□□□ 1.58
LSM4-204ENST00000594828 EDRF1Q3B7T1 1238 aa24.92■■□□□ 1.58
LSM4-204ENST00000594828 FUKQ8N0W3 1084 aa24.92■■□□□ 1.58
LSM4-204ENST00000594828 TAS1R2Q8TE23 839 aa24.92■■□□□ 1.58
LSM4-204ENST00000594828 P2RY13Q9BPV8 354 aa24.92■■□□□ 1.58
LSM4-204ENST00000594828 LINC00597Q9H2U6 94 aa24.92■■□□□ 1.58
LSM4-204ENST00000594828 DMAP1Q9NPF5 467 aaPredicted RBP24.92■■□□□ 1.58
LSM4-204ENST00000594828 NCDNQ9UBB6 729 aa24.92■■□□□ 1.58
LSM4-204ENST00000594828 CFAP54Q96N23 3096 aa24.91■■□□□ 1.58
LSM4-204ENST00000594828 LEFTY2O00292 366 aa24.91■■□□□ 1.58
LSM4-204ENST00000594828 AP1G2O75843 785 aa24.91■■□□□ 1.58
LSM4-204ENST00000594828 OAS1P00973 400 aaKnown RBP24.91■■□□□ 1.58
LSM4-204ENST00000594828 ORC1Q13415 861 aa24.91■■□□□ 1.58
LSM4-204ENST00000594828 KIAA2013Q8IYS2 634 aa24.91■■□□□ 1.58
LSM4-204ENST00000594828 PDZD8Q8NEN9 1154 aa24.91■■□□□ 1.58
LSM4-204ENST00000594828 FBXO32Q969P5 355 aa24.91■■□□□ 1.58
LSM4-204ENST00000594828 MMRN2Q9H8L6 949 aa24.91■■□□□ 1.58
LSM4-204ENST00000594828 FBRSL1Q9HCM7 1045 aaKnown RBP24.91■■□□□ 1.58
LSM4-204ENST00000594828 C2orf42Q9NWW7 574 aa24.91■■□□□ 1.58
LSM4-204ENST00000594828 CHORDC1Q9UHD1 332 aaPredicted RBP24.91■■□□□ 1.58
LSM4-204ENST00000594828 SMG5Q9UPR3 1016 aaKnown RBP24.91■■□□□ 1.58
LSM4-204ENST00000594828 K7ESF4 209 aa24.9■■□□□ 1.58
LSM4-204ENST00000594828 OLFM2O95897 454 aa24.9■■□□□ 1.58
LSM4-204ENST00000594828 CCDC130P13994 396 aa24.9■■□□□ 1.58
LSM4-204ENST00000594828 TRIM21P19474 475 aaKnown RBP24.9■■□□□ 1.58
LSM4-204ENST00000594828 DRD1P21728 446 aa24.9■■□□□ 1.58
LSM4-204ENST00000594828 CCDC150Q8NCX0 1101 aa24.9■■□□□ 1.58
LSM4-204ENST00000594828 ENGASEQ8NFI3 743 aa24.9■■□□□ 1.58
LSM4-204ENST00000594828 SCAMP5Q8TAC9 235 aa24.9■■□□□ 1.58
LSM4-204ENST00000594828 SLC2A14Q8TDB8 520 aa24.9■■□□□ 1.58
LSM4-204ENST00000594828 OVCA2Q8WZ82 227 aa24.9■■□□□ 1.58
LSM4-204ENST00000594828 SECISBP2LQ93073 1101 aaKnown RBP24.9■■□□□ 1.58
LSM4-204ENST00000594828 TMEM8AQ9HCN3 771 aa24.9■■□□□ 1.58
LSM4-204ENST00000594828 KRT82Q9NSB4 513 aa24.9■■□□□ 1.58
LSM4-204ENST00000594828 HMGXB4Q9UGU5 601 aa24.9■■□□□ 1.58
LSM4-204ENST00000594828 CPQQ9Y646 472 aa24.9■■□□□ 1.58
LSM4-204ENST00000594828 CHURC1-FNTBB4DL54 471 aa24.89■■□□□ 1.58
LSM4-204ENST00000594828 TNFRSF10BO14763 440 aa24.89■■□□□ 1.58
LSM4-204ENST00000594828 ATG13O75143 517 aa24.89■■□□□ 1.58
LSM4-204ENST00000594828 NFATC1O95644 943 aa24.89■■□□□ 1.58
LSM4-204ENST00000594828 EGFP01133 1207 aa24.89■■□□□ 1.58
LSM4-204ENST00000594828 GTF2H1P32780 548 aa24.89■■□□□ 1.58
LSM4-204ENST00000594828 PRCPP42785 496 aa24.89■■□□□ 1.58
LSM4-204ENST00000594828 FNTBP49356 437 aa24.89■■□□□ 1.58
LSM4-204ENST00000594828 DMWDQ09019 674 aa24.89■■□□□ 1.58
LSM4-204ENST00000594828 ZNF658Q5TYW1 1059 aaPredicted RBP24.89■■□□□ 1.58
LSM4-204ENST00000594828 C12orf29Q8N999 325 aa24.89■■□□□ 1.58
LSM4-204ENST00000594828 CD101Q93033 1021 aa24.89■■□□□ 1.58
LSM4-204ENST00000594828 EEF2KMTQ96G04 330 aa24.89■■□□□ 1.58
LSM4-204ENST00000594828 GSDMAQ96QA5 445 aa24.89■■□□□ 1.58
LSM4-204ENST00000594828 SMOQ99835 787 aa24.89■■□□□ 1.58
LSM4-204ENST00000594828 CYP3A43Q9HB55 503 aa24.89■■□□□ 1.58
LSM4-204ENST00000594828 APOBEC3GQ9HC16 384 aaKnown RBP24.89■■□□□ 1.58
LSM4-204ENST00000594828 COMMD8Q9NX08 183 aa24.89■■□□□ 1.58
LSM4-204ENST00000594828 SMPD4Q9NXE4 827 aa24.89■■□□□ 1.58
LSM4-204ENST00000594828 IL37Q9NZH6 218 aa24.89■■□□□ 1.58
LSM4-204ENST00000594828 CETN3O15182 167 aa24.88■■□□□ 1.57
LSM4-204ENST00000594828 SMC2O95347 1197 aa24.88■■□□□ 1.57
LSM4-204ENST00000594828 MBL2P11226 248 aaPredicted RBP24.88■■□□□ 1.57
LSM4-204ENST00000594828 SLC5A3P53794 718 aa24.88■■□□□ 1.57
LSM4-204ENST00000594828 MCCD1P59942 119 aaPredicted RBP24.88■■□□□ 1.57
LSM4-204ENST00000594828 NAIF1Q69YI7 327 aaPredicted RBP24.88■■□□□ 1.57
LSM4-204ENST00000594828 KRT39Q6A163 491 aa24.88■■□□□ 1.57
LSM4-204ENST00000594828 HEATR6Q6AI08 1181 aaKnown RBP24.88■■□□□ 1.57
LSM4-204ENST00000594828 PKN3Q6P5Z2 889 aa24.88■■□□□ 1.57
LSM4-204ENST00000594828 LONP2Q86WA8 852 aa24.88■■□□□ 1.57
LSM4-204ENST00000594828 KIAA1958Q8N8K9 716 aa24.88■■□□□ 1.57
LSM4-204ENST00000594828 NIF3L1Q9GZT8 377 aa24.88■■□□□ 1.57
LSM4-204ENST00000594828 FAM49BQ9NUQ9 324 aa24.88■■□□□ 1.57
LSM4-204ENST00000594828 RAB23Q9ULC3 237 aa24.88■■□□□ 1.57
LSM4-204ENST00000594828 BEST1O76090 585 aa24.87■■□□□ 1.57
LSM4-204ENST00000594828 EPB41P11171 864 aaKnown RBP24.87■■□□□ 1.57
LSM4-204ENST00000594828 HOXA6P31267 233 aa24.87■■□□□ 1.57
LSM4-204ENST00000594828 INCA1Q0VD86 236 aa24.87■■□□□ 1.57
LSM4-204ENST00000594828 FBXO43Q4G163 708 aa24.87■■□□□ 1.57
LSM4-204ENST00000594828 ZMIZ2Q8NF64 920 aa24.87■■□□□ 1.57
LSM4-204ENST00000594828 TWNKQ96RR1 684 aa24.87■■□□□ 1.57
LSM4-204ENST00000594828 NT5C1AQ9BXI3 368 aa24.87■■□□□ 1.57
LSM4-204ENST00000594828 CSNK1G1Q9HCP0 422 aa24.87■■□□□ 1.57
LSM4-204ENST00000594828 HOOK1Q9UJC3 728 aaKnown RBP24.87■■□□□ 1.57
LSM4-204ENST00000594828 PCDHA5Q9Y5H7 936 aa24.87■■□□□ 1.57
LSM4-204ENST00000594828 SLC9A3R1O14745 358 aaPredicted RBP24.86■■□□□ 1.57
LSM4-204ENST00000594828 RNF40O75150 1001 aa24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms