RNA–Protein interactions for RNA: ENST00000594372.1

SIN3B-204, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 3

Gene SIN3B, Length 875 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-204ENST00000594372 BPTFQ12830 3046 aa13.09□□□□□ -0.31
SIN3B-204ENST00000594372 TCRBV21S2A2A0A5A6 115 aa13.09□□□□□ -0.31
SIN3B-204ENST00000594372 CLDN5O00501 218 aa13.09□□□□□ -0.31
SIN3B-204ENST00000594372 GABRDO14764 452 aa13.09□□□□□ -0.31
SIN3B-204ENST00000594372 CFIP05156 583 aa13.09□□□□□ -0.31
SIN3B-204ENST00000594372 TMEM191BP0C7N4 346 aa13.09□□□□□ -0.31
SIN3B-204ENST00000594372 CEACAM1P13688 526 aa13.09□□□□□ -0.31
SIN3B-204ENST00000594372 CSRP1P21291 193 aaKnown RBP13.09□□□□□ -0.31
SIN3B-204ENST00000594372 P2RY2P41231 377 aa13.09□□□□□ -0.31
SIN3B-204ENST00000594372 SIM1P81133 766 aaPredicted RBP13.09□□□□□ -0.31
SIN3B-204ENST00000594372 RING1Q06587 406 aa13.09□□□□□ -0.31
SIN3B-204ENST00000594372 NR1H3Q13133 447 aa13.09□□□□□ -0.31
SIN3B-204ENST00000594372 CFAP221Q4G0U5 840 aa13.09□□□□□ -0.31
SIN3B-204ENST00000594372 FAM173BQ6P4H8 233 aa13.09□□□□□ -0.31
SIN3B-204ENST00000594372 FAM171BQ6P995 826 aa13.09□□□□□ -0.31
SIN3B-204ENST00000594372 RHBDF2Q6PJF5 856 aa13.09□□□□□ -0.31
SIN3B-204ENST00000594372 SYCP3Q8IZU3 236 aa13.09□□□□□ -0.31
SIN3B-204ENST00000594372 TMEM86AQ8N2M4 240 aa13.09□□□□□ -0.31
SIN3B-204ENST00000594372 KCTD17Q8N5Z5 321 aa13.09□□□□□ -0.31
SIN3B-204ENST00000594372 TOP6BLQ8N6T0 577 aa13.09□□□□□ -0.31
SIN3B-204ENST00000594372 ACCSQ96QU6 501 aa13.09□□□□□ -0.31
SIN3B-204ENST00000594372 DPEP3Q9H4B8 488 aa13.09□□□□□ -0.31
SIN3B-204ENST00000594372 ST6GALNAC4Q9H4F1 302 aa13.09□□□□□ -0.31
SIN3B-204ENST00000594372 ITGA11Q9UKX5 1188 aa13.09□□□□□ -0.31
SIN3B-204ENST00000594372 GTF3C3Q9Y5Q9 886 aa13.09□□□□□ -0.31
SIN3B-204ENST00000594372 ASXL3Q9C0F0 2248 aa13.08□□□□□ -0.32
SIN3B-204ENST00000594372 ZNF840PA6NDX5 716 aa13.08□□□□□ -0.32
SIN3B-204ENST00000594372 F8VP50 259 aa13.08□□□□□ -0.32
SIN3B-204ENST00000594372 KAT7O95251 611 aa13.08□□□□□ -0.32
SIN3B-204ENST00000594372 MBL2P11226 248 aaPredicted RBP13.08□□□□□ -0.32
SIN3B-204ENST00000594372 IDEP14735 1019 aa13.08□□□□□ -0.32
SIN3B-204ENST00000594372 LONP1P36776 959 aaKnown RBP13.08□□□□□ -0.32
SIN3B-204ENST00000594372 RBP5P82980 135 aa13.08□□□□□ -0.32
SIN3B-204ENST00000594372 CEBPZQ03701 1054 aaKnown RBP13.08□□□□□ -0.32
SIN3B-204ENST00000594372 RESTQ13127 1097 aa13.08□□□□□ -0.32
SIN3B-204ENST00000594372 MAP7D1Q3KQU3 841 aa13.08□□□□□ -0.32
SIN3B-204ENST00000594372 LPCAT2Q7L5N7 544 aa13.08□□□□□ -0.32
SIN3B-204ENST00000594372 HS2ST1Q7LGA3 356 aa13.08□□□□□ -0.32
SIN3B-204ENST00000594372 CBWD2Q8IUF1 395 aa13.08□□□□□ -0.32
SIN3B-204ENST00000594372 LRRC52Q8N7C0 313 aa13.08□□□□□ -0.32
SIN3B-204ENST00000594372 FSIP1Q8NA03 581 aa13.08□□□□□ -0.32
SIN3B-204ENST00000594372 CACTINQ8WUQ7 758 aaKnown RBP13.08□□□□□ -0.32
SIN3B-204ENST00000594372 EXOC4Q96A65 974 aa13.08□□□□□ -0.32
SIN3B-204ENST00000594372 PCED1BQ96HM7 432 aa13.08□□□□□ -0.32
SIN3B-204ENST00000594372 HPDLQ96IR7 371 aa13.08□□□□□ -0.32
SIN3B-204ENST00000594372 CAMK1GQ96NX5 476 aa13.08□□□□□ -0.32
SIN3B-204ENST00000594372 TRIM9Q9C026 710 aa13.08□□□□□ -0.32
SIN3B-204ENST00000594372 ZNF518BQ9C0D4 1074 aa13.08□□□□□ -0.32
SIN3B-204ENST00000594372 SLC6A17Q9H1V8 727 aa13.08□□□□□ -0.32
SIN3B-204ENST00000594372 ARHGEF4Q9NR80 690 aa13.08□□□□□ -0.32
SIN3B-204ENST00000594372 GDAP2Q9NXN4 497 aa13.08□□□□□ -0.32
SIN3B-204ENST00000594372 TRPM5Q9NZQ8 1165 aa13.08□□□□□ -0.32
SIN3B-204ENST00000594372 HCN2Q9UL51 889 aa13.08□□□□□ -0.32
SIN3B-204ENST00000594372 LHX6Q9UPM6 363 aa13.08□□□□□ -0.32
SIN3B-204ENST00000594372 GCN1Q92616 2671 aaKnown RBP13.08□□□□□ -0.32
SIN3B-204ENST00000594372 LOC400499M0QZD8 3231 aa13.08□□□□□ -0.32
SIN3B-204ENST00000594372 A0A087X0B3 334 aa13.07□□□□□ -0.32
SIN3B-204ENST00000594372 SOBPA7XYQ1 873 aa13.07□□□□□ -0.32
SIN3B-204ENST00000594372 TAF4O00268 1085 aa13.07□□□□□ -0.32
SIN3B-204ENST00000594372 APODP05090 189 aa13.07□□□□□ -0.32
SIN3B-204ENST00000594372 IRF1P10914 325 aa13.07□□□□□ -0.32
SIN3B-204ENST00000594372 ADH5P11766 374 aa13.07□□□□□ -0.32
SIN3B-204ENST00000594372 ANXA13P27216 316 aa13.07□□□□□ -0.32
SIN3B-204ENST00000594372 PCSK1P29120 753 aa13.07□□□□□ -0.32
SIN3B-204ENST00000594372 MAGEA11P43364 429 aa13.07□□□□□ -0.32
SIN3B-204ENST00000594372 KIR2DL1P43626 348 aaPredicted RBP13.07□□□□□ -0.32
SIN3B-204ENST00000594372 LHX1P48742 406 aa13.07□□□□□ -0.32
SIN3B-204ENST00000594372 TAF10Q12962 218 aa13.07□□□□□ -0.32
SIN3B-204ENST00000594372 POSTNQ15063 836 aa13.07□□□□□ -0.32
SIN3B-204ENST00000594372 C8orf34Q49A92 452 aa13.07□□□□□ -0.32
SIN3B-204ENST00000594372 LY6G5CQ5SRR4 150 aa13.07□□□□□ -0.32
SIN3B-204ENST00000594372 LYSMD4Q5XG99 296 aa13.07□□□□□ -0.32
SIN3B-204ENST00000594372 C19orf48Q6RUI8 117 aa13.07□□□□□ -0.32
SIN3B-204ENST00000594372 DENND5BQ6ZUT9 1274 aa13.07□□□□□ -0.32
SIN3B-204ENST00000594372 NT5DC4Q86YG4 428 aa13.07□□□□□ -0.32
SIN3B-204ENST00000594372 MIB1Q86YT6 1006 aa13.07□□□□□ -0.32
SIN3B-204ENST00000594372 ADGRG2Q8IZP9 1017 aa13.07□□□□□ -0.32
SIN3B-204ENST00000594372 CHCHD4Q8N4Q1 142 aa13.07□□□□□ -0.32
SIN3B-204ENST00000594372 SPATA18Q8TC71 538 aa13.07□□□□□ -0.32
SIN3B-204ENST00000594372 WHAMMQ8TF30 809 aa13.07□□□□□ -0.32
SIN3B-204ENST00000594372 HVCN1Q96D96 273 aa13.07□□□□□ -0.32
SIN3B-204ENST00000594372 PNKPQ96T60 521 aa13.07□□□□□ -0.32
SIN3B-204ENST00000594372 MMS19Q96T76 1030 aa13.07□□□□□ -0.32
SIN3B-204ENST00000594372 INTS13Q9NVM9 706 aa13.07□□□□□ -0.32
SIN3B-204ENST00000594372 VPS37CA5D8V6 355 aaPredicted RBP13.06□□□□□ -0.32
SIN3B-204ENST00000594372 SLC26A4O43511 780 aa13.06□□□□□ -0.32
SIN3B-204ENST00000594372 SCP2P22307 547 aa13.06□□□□□ -0.32
SIN3B-204ENST00000594372 PGFP49763 221 aa13.06□□□□□ -0.32
SIN3B-204ENST00000594372 MRPS21P82921 87 aaKnown RBP13.06□□□□□ -0.32
SIN3B-204ENST00000594372 RRAGBQ5VZM2 374 aa13.06□□□□□ -0.32
SIN3B-204ENST00000594372 LARP1BQ659C4 914 aaKnown RBP13.06□□□□□ -0.32
SIN3B-204ENST00000594372 C4orf50Q6ZRC1 276 aa13.06□□□□□ -0.32
SIN3B-204ENST00000594372 PIP4P1Q86T03 277 aa13.06□□□□□ -0.32
SIN3B-204ENST00000594372 SYT12Q8IV01 421 aa13.06□□□□□ -0.32
SIN3B-204ENST00000594372 PHTF2Q8N3S3 785 aa13.06□□□□□ -0.32
SIN3B-204ENST00000594372 FUBP3Q96I24 572 aaKnown RBP eCLIP13.06□□□□□ -0.32
SIN3B-204ENST00000594372 ANKRD36BP1Q96IX9 119 aa13.06□□□□□ -0.32
SIN3B-204ENST00000594372 SPACA7Q96KW9 195 aa13.06□□□□□ -0.32
SIN3B-204ENST00000594372 SPATA17Q96L03 361 aa13.06□□□□□ -0.32
SIN3B-204ENST00000594372 ACOX2Q99424 681 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms