RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 ANKRD36BP1Q96IX9 119 aa17.24■□□□□ 0.35
LIG1-206ENST00000594067 FETUBQ9UGM5 382 aa17.24■□□□□ 0.35
LIG1-206ENST00000594067 DOCK1Q14185 1865 aa17.24■□□□□ 0.35
LIG1-206ENST00000594067 B4GALT5O43286 388 aa17.24■□□□□ 0.35
LIG1-206ENST00000594067 TROVE2P10155 538 aaKnown RBP eCLIP17.24■□□□□ 0.35
LIG1-206ENST00000594067 CALRP27797 417 aaKnown RBP17.24■□□□□ 0.35
LIG1-206ENST00000594067 ELK3P41970 407 aa17.24■□□□□ 0.35
LIG1-206ENST00000594067 MMRN1Q13201 1228 aa17.24■□□□□ 0.35
LIG1-206ENST00000594067 DPYSL3Q14195 570 aa17.24■□□□□ 0.35
LIG1-206ENST00000594067 SURF1Q15526 300 aa17.24■□□□□ 0.35
LIG1-206ENST00000594067 TAZQ16635 292 aa17.24■□□□□ 0.35
LIG1-206ENST00000594067 LY6KQ17RY6 165 aa17.24■□□□□ 0.35
LIG1-206ENST00000594067 IER5Q5VY09 327 aa17.24■□□□□ 0.35
LIG1-206ENST00000594067 LRRC6Q86X45 466 aa17.24■□□□□ 0.35
LIG1-206ENST00000594067 ZNF398Q8TD17 642 aa17.24■□□□□ 0.35
LIG1-206ENST00000594067 TWNKQ96RR1 684 aa17.24■□□□□ 0.35
LIG1-206ENST00000594067 CADM1Q9BY67 442 aaKnown RBP17.24■□□□□ 0.35
LIG1-206ENST00000594067 SDCBP2Q9H190 292 aa17.24■□□□□ 0.35
LIG1-206ENST00000594067 MANSC1Q9H8J5 431 aa17.24■□□□□ 0.35
LIG1-206ENST00000594067 HMGXB4Q9UGU5 601 aa17.24■□□□□ 0.35
LIG1-206ENST00000594067 A0A0G2JND7 137 aa17.23■□□□□ 0.35
LIG1-206ENST00000594067 MCF2LO15068 1137 aa17.23■□□□□ 0.35
LIG1-206ENST00000594067 RXRBP28702 533 aa17.23■□□□□ 0.35
LIG1-206ENST00000594067 THEMIS2Q5TEJ8 643 aa17.23■□□□□ 0.35
LIG1-206ENST00000594067 EEF1DP3Q658K8 133 aa17.23■□□□□ 0.35
LIG1-206ENST00000594067 DSTYKQ6XUX3 929 aa17.23■□□□□ 0.35
LIG1-206ENST00000594067 ZC3H18Q86VM9 953 aaKnown RBP17.23■□□□□ 0.35
LIG1-206ENST00000594067 TMEM192Q8IY95 271 aa17.23■□□□□ 0.35
LIG1-206ENST00000594067 SPATA18Q8TC71 538 aa17.23■□□□□ 0.35
LIG1-206ENST00000594067 CAMKK2Q96RR4 588 aa17.23■□□□□ 0.35
LIG1-206ENST00000594067 FRMD8P1Q9BZ68 369 aaPredicted RBP17.23■□□□□ 0.35
LIG1-206ENST00000594067 LHX5Q9H2C1 402 aa17.23■□□□□ 0.35
LIG1-206ENST00000594067 SPDYE5A6NIY4 337 aa17.23■□□□□ 0.35
LIG1-206ENST00000594067 APOC4-APOC2K7ER74 178 aa17.23■□□□□ 0.35
LIG1-206ENST00000594067 MED7O43513 233 aa17.23■□□□□ 0.35
LIG1-206ENST00000594067 APOC2P02655 101 aa17.23■□□□□ 0.35
LIG1-206ENST00000594067 MT-ND3P03897 115 aa17.23■□□□□ 0.35
LIG1-206ENST00000594067 ANGEL2Q5VTE6 544 aaKnown RBP17.23■□□□□ 0.35
LIG1-206ENST00000594067 FNIP1Q8TF40 1166 aa17.23■□□□□ 0.35
LIG1-206ENST00000594067 SEPT1Q8WYJ6 367 aa17.23■□□□□ 0.35
LIG1-206ENST00000594067 PHACTR1Q9C0D0 580 aa17.23■□□□□ 0.35
LIG1-206ENST00000594067 PIM2Q9P1W9 311 aa17.23■□□□□ 0.35
LIG1-206ENST00000594067 LCTP09848 1927 aa17.22■□□□□ 0.35
LIG1-206ENST00000594067 TM9SF1O15321 606 aa17.22■□□□□ 0.35
LIG1-206ENST00000594067 LPXNO60711 386 aa17.22■□□□□ 0.35
LIG1-206ENST00000594067 TRUB2O95900 331 aaKnown RBP17.22■□□□□ 0.35
LIG1-206ENST00000594067 LMNAP02545 664 aaKnown RBP17.22■□□□□ 0.35
LIG1-206ENST00000594067 CXCL8P10145 99 aa17.22■□□□□ 0.35
LIG1-206ENST00000594067 RPS12P25398 132 aaKnown RBP17.22■□□□□ 0.35
LIG1-206ENST00000594067 TSNAXIP1Q2TAA8 658 aa17.22■□□□□ 0.35
LIG1-206ENST00000594067 RAB6CQ53S08 254 aa17.22■□□□□ 0.35
LIG1-206ENST00000594067 ZC3H12AQ5D1E8 599 aaKnown RBP17.22■□□□□ 0.35
LIG1-206ENST00000594067 SH3PXD2AQ5TCZ1 1133 aa17.22■□□□□ 0.35
LIG1-206ENST00000594067 DPH6Q7L8W6 267 aa17.22■□□□□ 0.35
LIG1-206ENST00000594067 FAM136AQ96C01 138 aa17.22■□□□□ 0.35
LIG1-206ENST00000594067 ZBTB10Q96DT7 871 aa17.22■□□□□ 0.35
LIG1-206ENST00000594067 ZNF333Q96JL9 665 aa17.22■□□□□ 0.35
LIG1-206ENST00000594067 SERAC1Q96JX3 654 aa17.22■□□□□ 0.35
LIG1-206ENST00000594067 NLRP4Q96MN2 994 aa17.22■□□□□ 0.35
LIG1-206ENST00000594067 RAB6CQ9H0N0 254 aa17.22■□□□□ 0.35
LIG1-206ENST00000594067 SMYD3Q9H7B4 428 aa17.22■□□□□ 0.35
LIG1-206ENST00000594067 USP18Q9UMW8 372 aa17.22■□□□□ 0.35
LIG1-206ENST00000594067 SOWAHBA6NEL2 793 aa17.22■□□□□ 0.35
LIG1-206ENST00000594067 KBTBD13C9JR72 458 aa17.22■□□□□ 0.35
LIG1-206ENST00000594067 INO80B-WBP1J3KQ70 363 aa17.22■□□□□ 0.35
LIG1-206ENST00000594067 PIK3R2O00459 728 aa17.22■□□□□ 0.35
LIG1-206ENST00000594067 HNRNPCL1O60812 293 aaKnown RBP17.22■□□□□ 0.35
LIG1-206ENST00000594067 FESP07332 822 aa17.22■□□□□ 0.35
LIG1-206ENST00000594067 KLC1Q07866 573 aa17.22■□□□□ 0.35
LIG1-206ENST00000594067 FAAP100Q0VG06 881 aa17.22■□□□□ 0.35
LIG1-206ENST00000594067 PTK7Q13308 1070 aa17.22■□□□□ 0.35
LIG1-206ENST00000594067 LBRQ14739 615 aaKnown RBP17.22■□□□□ 0.35
LIG1-206ENST00000594067 ZNF667Q5HYK9 610 aa17.22■□□□□ 0.35
LIG1-206ENST00000594067 ATF7IP2Q5U623 682 aa17.22■□□□□ 0.35
LIG1-206ENST00000594067 DARS2Q6PI48 645 aaKnown RBP17.22■□□□□ 0.35
LIG1-206ENST00000594067 MPZL3Q6UWV2 235 aa17.22■□□□□ 0.35
LIG1-206ENST00000594067 APBB1IPQ7Z5R6 666 aaPredicted RBP17.22■□□□□ 0.35
LIG1-206ENST00000594067 CHST13Q8NET6 341 aa17.22■□□□□ 0.35
LIG1-206ENST00000594067 CMASQ8NFW8 434 aaPredicted RBP17.22■□□□□ 0.35
LIG1-206ENST00000594067 TRAPPC12Q8WVT3 735 aa17.22■□□□□ 0.35
LIG1-206ENST00000594067 CYTH2Q99418 400 aa17.22■□□□□ 0.35
LIG1-206ENST00000594067 SH3GL3Q99963 347 aa17.22■□□□□ 0.35
LIG1-206ENST00000594067 INO80BQ9C086 356 aaPredicted RBP17.22■□□□□ 0.35
LIG1-206ENST00000594067 NMRK1Q9NWW6 199 aa17.22■□□□□ 0.35
LIG1-206ENST00000594067 AVILO75366 819 aa17.21■□□□□ 0.35
LIG1-206ENST00000594067 RNF8O76064 485 aa17.21■□□□□ 0.35
LIG1-206ENST00000594067 YWHAGP61981 247 aaKnown RBP eCLIP17.21■□□□□ 0.35
LIG1-206ENST00000594067 KBTBD12Q3ZCT8 623 aa17.21■□□□□ 0.35
LIG1-206ENST00000594067 SLC4A11Q8NBS3 891 aa17.21■□□□□ 0.35
LIG1-206ENST00000594067 TTC17Q96AE7 1141 aa17.21■□□□□ 0.35
LIG1-206ENST00000594067 ALKBH8Q96BT7 664 aaKnown RBP17.21■□□□□ 0.35
LIG1-206ENST00000594067 FAM111AQ96PZ2 611 aa17.21■□□□□ 0.35
LIG1-206ENST00000594067 PEBP4Q96S96 227 aa17.21■□□□□ 0.35
LIG1-206ENST00000594067 TSSK1BQ9BXA7 367 aa17.21■□□□□ 0.35
LIG1-206ENST00000594067 VPS11Q9H270 941 aa17.21■□□□□ 0.35
LIG1-206ENST00000594067 HEY2Q9UBP5 337 aa17.21■□□□□ 0.35
LIG1-206ENST00000594067 SIX4Q9UIU6 781 aa17.21■□□□□ 0.35
LIG1-206ENST00000594067 TCRBV9S1A1TA0A576 114 aa17.21■□□□□ 0.35
LIG1-206ENST00000594067 MAP3K13O43283 966 aa17.21■□□□□ 0.35
LIG1-206ENST00000594067 CCDC22O60826 627 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms