RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 ZCCHC11Q5TAX3 1644 aaKnown RBP5.88□□□□□ -1.47
SMAD4-216ENST00000593223 POLR2AP24928 1970 aaKnown RBP5.88□□□□□ -1.47
SMAD4-216ENST00000593223 VWC2LB2RUY7 222 aa5.88□□□□□ -1.47
SMAD4-216ENST00000593223 H7C4K7 107 aa5.88□□□□□ -1.47
SMAD4-216ENST00000593223 RAB27BO00194 218 aa5.88□□□□□ -1.47
SMAD4-216ENST00000593223 KPNA5O15131 536 aa5.88□□□□□ -1.47
SMAD4-216ENST00000593223 SLC16A3O15427 465 aaKnown RBP5.88□□□□□ -1.47
SMAD4-216ENST00000593223 URI1O94763 535 aaPredicted RBP5.88□□□□□ -1.47
SMAD4-216ENST00000593223 TTLL1O95922 423 aa5.88□□□□□ -1.47
SMAD4-216ENST00000593223 PARP1P09874 1014 aaKnown RBP5.88□□□□□ -1.47
SMAD4-216ENST00000593223 ZFXP17010 805 aaPredicted RBP5.88□□□□□ -1.47
SMAD4-216ENST00000593223 GRIA3P42263 894 aa5.88□□□□□ -1.47
SMAD4-216ENST00000593223 PIK3CBP42338 1070 aa5.88□□□□□ -1.47
SMAD4-216ENST00000593223 CARSP49589 748 aaKnown RBP5.88□□□□□ -1.47
SMAD4-216ENST00000593223 PDE6CP51160 858 aa5.88□□□□□ -1.47
SMAD4-216ENST00000593223 ITGA8P53708 1063 aa5.88□□□□□ -1.47
SMAD4-216ENST00000593223 SIM1P81133 766 aaPredicted RBP5.88□□□□□ -1.47
SMAD4-216ENST00000593223 BMPR2Q13873 1038 aa5.88□□□□□ -1.47
SMAD4-216ENST00000593223 SLC29A2Q14542 456 aa5.88□□□□□ -1.47
SMAD4-216ENST00000593223 PLAC9Q5JTB6 97 aa5.88□□□□□ -1.47
SMAD4-216ENST00000593223 KIAA0895LQ68EN5 471 aa5.88□□□□□ -1.47
SMAD4-216ENST00000593223 CCSAPQ6IQ19 270 aaPredicted RBP5.88□□□□□ -1.47
SMAD4-216ENST00000593223 UNC13DQ70J99 1090 aa5.88□□□□□ -1.47
SMAD4-216ENST00000593223 DTX2Q86UW9 622 aa5.88□□□□□ -1.47
SMAD4-216ENST00000593223 CCDC33Q8N5R6 958 aa5.88□□□□□ -1.47
SMAD4-216ENST00000593223 GPATCH11Q8N954 259 aa5.88□□□□□ -1.47
SMAD4-216ENST00000593223 ATG4AQ8WYN0 398 aa5.88□□□□□ -1.47
SMAD4-216ENST00000593223 MSLNLQ96KJ4 702 aa5.88□□□□□ -1.47
SMAD4-216ENST00000593223 DUSP26Q9BV47 211 aa5.88□□□□□ -1.47
SMAD4-216ENST00000593223 ARNT2Q9HBZ2 717 aa5.88□□□□□ -1.47
SMAD4-216ENST00000593223 TRMT13Q9NUP7 481 aaKnown RBP5.88□□□□□ -1.47
SMAD4-216ENST00000593223 DKK3Q9UBP4 350 aa5.88□□□□□ -1.47
SMAD4-216ENST00000593223 ZNHIT2Q9UHR6 403 aa5.88□□□□□ -1.47
SMAD4-216ENST00000593223 CCNL1Q9UK58 526 aaPredicted RBP5.88□□□□□ -1.47
SMAD4-216ENST00000593223 FER1L4A9Z1Z3 1794 aa5.88□□□□□ -1.47
SMAD4-216ENST00000593223 KAT6AQ92794 2004 aa5.87□□□□□ -1.47
SMAD4-216ENST00000593223 PLIN1O60240 522 aa5.87□□□□□ -1.47
SMAD4-216ENST00000593223 NXPH3O95157 252 aa5.87□□□□□ -1.47
SMAD4-216ENST00000593223 IL18RAPO95256 599 aa5.87□□□□□ -1.47
SMAD4-216ENST00000593223 KCNA3P22001 575 aa5.87□□□□□ -1.47
SMAD4-216ENST00000593223 YY1P25490 414 aa5.87□□□□□ -1.47
SMAD4-216ENST00000593223 ADORA2AP29274 412 aa5.87□□□□□ -1.47
SMAD4-216ENST00000593223 PRKAR1BP31321 381 aa5.87□□□□□ -1.47
SMAD4-216ENST00000593223 ALDH9A1P49189 494 aa5.87□□□□□ -1.47
SMAD4-216ENST00000593223 CLCN2P51788 898 aa5.87□□□□□ -1.47
SMAD4-216ENST00000593223 SP2Q02086 613 aa5.87□□□□□ -1.47
SMAD4-216ENST00000593223 PICALMQ13492 652 aa5.87□□□□□ -1.47
SMAD4-216ENST00000593223 ARHGEF7Q14155 803 aa5.87□□□□□ -1.47
SMAD4-216ENST00000593223 AKNAD1Q5T1N1 836 aa5.87□□□□□ -1.47
SMAD4-216ENST00000593223 TREML2Q5T2D2 321 aa5.87□□□□□ -1.47
SMAD4-216ENST00000593223 ZNF618Q5T7W0 954 aa5.87□□□□□ -1.47
SMAD4-216ENST00000593223 C11orf96Q7Z7L8 435 aa5.87□□□□□ -1.47
SMAD4-216ENST00000593223 LIX1LQ8IVB5 337 aa5.87□□□□□ -1.47
SMAD4-216ENST00000593223 TMEM171Q8WVE6 324 aa5.87□□□□□ -1.47
SMAD4-216ENST00000593223 OSCP1Q8WVF1 389 aa5.87□□□□□ -1.47
SMAD4-216ENST00000593223 PDLIM2Q96JY6 352 aa5.87□□□□□ -1.47
SMAD4-216ENST00000593223 SNX22Q96L94 193 aa5.87□□□□□ -1.47
SMAD4-216ENST00000593223 BRIP1Q9BX63 1249 aa5.87□□□□□ -1.47
SMAD4-216ENST00000593223 CHST8Q9H2A9 424 aa5.87□□□□□ -1.47
SMAD4-216ENST00000593223 XPNPEP3Q9NQH7 507 aa5.87□□□□□ -1.47
SMAD4-216ENST00000593223 TBC1D23Q9NUY8 699 aa5.87□□□□□ -1.47
SMAD4-216ENST00000593223 TERF2IPQ9NYB0 399 aa5.87□□□□□ -1.47
SMAD4-216ENST00000593223 FOXJ2Q9P0K8 574 aa5.87□□□□□ -1.47
SMAD4-216ENST00000593223 ZNF212Q9UDV6 495 aa5.87□□□□□ -1.47
SMAD4-216ENST00000593223 MID2Q9UJV3 735 aa5.87□□□□□ -1.47
SMAD4-216ENST00000593223 TLK1Q9UKI8 766 aa5.87□□□□□ -1.47
SMAD4-216ENST00000593223 ST3GAL5Q9UNP4 418 aa5.87□□□□□ -1.47
SMAD4-216ENST00000593223 LAS1LQ9Y4W2 734 aaKnown RBP5.87□□□□□ -1.47
SMAD4-216ENST00000593223 FRMPD1Q5SYB0 1578 aa5.87□□□□□ -1.47
SMAD4-216ENST00000593223 ANO9A1A5B4 782 aa5.86□□□□□ -1.47
SMAD4-216ENST00000593223 WDR27A2RRH5 827 aa5.86□□□□□ -1.47
SMAD4-216ENST00000593223 POM121BA6NF01 834 aa5.86□□□□□ -1.47
SMAD4-216ENST00000593223 LINC00473A8K010 186 aa5.86□□□□□ -1.47
SMAD4-216ENST00000593223 F8W8V4 182 aa5.86□□□□□ -1.47
SMAD4-216ENST00000593223 KIAA0355O15063 1070 aa5.86□□□□□ -1.47
SMAD4-216ENST00000593223 SRGAP2O75044 1071 aa5.86□□□□□ -1.47
SMAD4-216ENST00000593223 INMTO95050 263 aa5.86□□□□□ -1.47
SMAD4-216ENST00000593223 LMNAP02545 664 aaKnown RBP5.86□□□□□ -1.47
SMAD4-216ENST00000593223 MT-ND5P03915 603 aa5.86□□□□□ -1.47
SMAD4-216ENST00000593223 EBLN1P0CF75 366 aa5.86□□□□□ -1.47
SMAD4-216ENST00000593223 TXNP10599 105 aaKnown RBP5.86□□□□□ -1.47
SMAD4-216ENST00000593223 SLC5A1P13866 664 aa5.86□□□□□ -1.47
SMAD4-216ENST00000593223 NDUFB7P17568 137 aa5.86□□□□□ -1.47
SMAD4-216ENST00000593223 TYRP1P17643 537 aa5.86□□□□□ -1.47
SMAD4-216ENST00000593223 BMP5P22003 454 aa5.86□□□□□ -1.47
SMAD4-216ENST00000593223 ACVR2AP27037 513 aa5.86□□□□□ -1.47
SMAD4-216ENST00000593223 PTDSS1P48651 473 aaKnown RBP5.86□□□□□ -1.47
SMAD4-216ENST00000593223 RARRES1P49788 294 aa5.86□□□□□ -1.47
SMAD4-216ENST00000593223 PDE1AP54750 535 aa5.86□□□□□ -1.47
SMAD4-216ENST00000593223 DAG1Q14118 895 aa5.86□□□□□ -1.47
SMAD4-216ENST00000593223 FAM153CQ494X1 144 aa5.86□□□□□ -1.47
SMAD4-216ENST00000593223 PCSK4Q6UW60 755 aa5.86□□□□□ -1.47
SMAD4-216ENST00000593223 RNF44Q7L0R7 432 aa5.86□□□□□ -1.47
SMAD4-216ENST00000593223 MAVSQ7Z434 540 aa5.86□□□□□ -1.47
SMAD4-216ENST00000593223 GRASPQ7Z6J2 395 aaPredicted RBP5.86□□□□□ -1.47
SMAD4-216ENST00000593223 CCDC146Q8IYE0 955 aa5.86□□□□□ -1.47
SMAD4-216ENST00000593223 SDR16C5Q8N3Y7 309 aa5.86□□□□□ -1.47
SMAD4-216ENST00000593223 XAGE5Q8WWM1 108 aa5.86□□□□□ -1.47
SMAD4-216ENST00000593223 GLG1Q92896 1179 aa5.86□□□□□ -1.47
SMAD4-216ENST00000593223 IQCDQ96DY2 449 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms