RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 FGFR3P22607 806 aa14.19□□□□□ -0.14
VMP1-217ENST00000593168 BMPR1AP36894 532 aa14.19□□□□□ -0.14
VMP1-217ENST00000593168 RPL34P49207 117 aaKnown RBP14.19□□□□□ -0.14
VMP1-217ENST00000593168 ALDH7A1P49419 539 aaKnown RBP14.19□□□□□ -0.14
VMP1-217ENST00000593168 BCAR1P56945 870 aa14.19□□□□□ -0.14
VMP1-217ENST00000593168 SLC8A3P57103 927 aa14.19□□□□□ -0.14
VMP1-217ENST00000593168 AMPD2Q01433 879 aa14.19□□□□□ -0.14
VMP1-217ENST00000593168 PDE4CQ08493 712 aa14.19□□□□□ -0.14
VMP1-217ENST00000593168 MRPL58Q14197 206 aaKnown RBP14.19□□□□□ -0.14
VMP1-217ENST00000593168 MDH1BQ5I0G3 518 aa14.19□□□□□ -0.14
VMP1-217ENST00000593168 FUT10Q6P4F1 479 aa14.19□□□□□ -0.14
VMP1-217ENST00000593168 PAQR9Q6ZVX9 377 aa14.19□□□□□ -0.14
VMP1-217ENST00000593168 DAAM2Q86T65 1068 aa14.19□□□□□ -0.14
VMP1-217ENST00000593168 PHOX2BQ99453 314 aa14.19□□□□□ -0.14
VMP1-217ENST00000593168 PKMYT1Q99640 499 aa14.19□□□□□ -0.14
VMP1-217ENST00000593168 TLR10Q9BXR5 811 aa14.19□□□□□ -0.14
VMP1-217ENST00000593168 DUSP16Q9BY84 665 aa14.19□□□□□ -0.14
VMP1-217ENST00000593168 B3GNT5Q9BYG0 378 aa14.19□□□□□ -0.14
VMP1-217ENST00000593168 SYNCQ9H7C4 482 aa14.19□□□□□ -0.14
VMP1-217ENST00000593168 CDC23Q9UJX2 597 aa14.19□□□□□ -0.14
VMP1-217ENST00000593168 SAR1BQ9Y6B6 198 aa14.19□□□□□ -0.14
VMP1-217ENST00000593168 SF3B1O75533 1304 aaKnown RBP eCLIP14.18□□□□□ -0.142e-7■■■■■ 143.6
VMP1-217ENST00000593168 TSC2P49815 1807 aa14.18□□□□□ -0.14
VMP1-217ENST00000593168 TECTAO75443 2155 aa14.18□□□□□ -0.14
VMP1-217ENST00000593168 SIGLEC16A6NMB1 481 aa14.18□□□□□ -0.14
VMP1-217ENST00000593168 MYO1FO00160 1098 aa14.18□□□□□ -0.14
VMP1-217ENST00000593168 XPO1O14980 1071 aaKnown RBP14.18□□□□□ -0.14
VMP1-217ENST00000593168 NCK2O43639 380 aa14.18□□□□□ -0.14
VMP1-217ENST00000593168 TBX10O75333 385 aa14.18□□□□□ -0.14
VMP1-217ENST00000593168 CSPG5O95196 566 aa14.18□□□□□ -0.14
VMP1-217ENST00000593168 EFEMP2O95967 443 aa14.18□□□□□ -0.14
VMP1-217ENST00000593168 NPR3P17342 541 aa14.18□□□□□ -0.14
VMP1-217ENST00000593168 TCP1P17987 556 aaKnown RBP14.18□□□□□ -0.14
VMP1-217ENST00000593168 ADORA2BP29275 332 aa14.18□□□□□ -0.14
VMP1-217ENST00000593168 TKTP29401 623 aaKnown RBP14.18□□□□□ -0.14
VMP1-217ENST00000593168 ACADSBP45954 432 aa14.18□□□□□ -0.14
VMP1-217ENST00000593168 PLA2G4AP47712 749 aa14.18□□□□□ -0.14
VMP1-217ENST00000593168 TSPY1Q01534 308 aa14.18□□□□□ -0.14
VMP1-217ENST00000593168 PPP1R15BQ5SWA1 713 aa14.18□□□□□ -0.14
VMP1-217ENST00000593168 FAM171A1Q5VUB5 890 aa14.18□□□□□ -0.14
VMP1-217ENST00000593168 PMF1Q6P1K2 205 aa14.18□□□□□ -0.14
VMP1-217ENST00000593168 DNAJC24Q6P3W2 148 aa14.18□□□□□ -0.14
VMP1-217ENST00000593168 PEX26Q7Z412 305 aa14.18□□□□□ -0.14
VMP1-217ENST00000593168 NT5DC3Q86UY8 548 aa14.18□□□□□ -0.14
VMP1-217ENST00000593168 XYLT1Q86Y38 959 aa14.18□□□□□ -0.14
VMP1-217ENST00000593168 RNF135Q8IUD6 432 aa14.18□□□□□ -0.14
VMP1-217ENST00000593168 MCRS1Q96EZ8 462 aa14.18□□□□□ -0.14
VMP1-217ENST00000593168 PCED1BQ96HM7 432 aa14.18□□□□□ -0.14
VMP1-217ENST00000593168 MED10Q9BTT4 135 aa14.18□□□□□ -0.14
VMP1-217ENST00000593168 C11orf84Q9BUA3 381 aaPredicted RBP14.18□□□□□ -0.14
VMP1-217ENST00000593168 OXCT2Q9BYC2 517 aaPredicted RBP14.18□□□□□ -0.14
VMP1-217ENST00000593168 GPR62Q9BZJ7 368 aa14.18□□□□□ -0.14
VMP1-217ENST00000593168 UBXN6Q9BZV1 441 aa14.18□□□□□ -0.14
VMP1-217ENST00000593168 LMAN2LQ9H0V9 348 aa14.18□□□□□ -0.14
VMP1-217ENST00000593168 IGFLR1Q9H665 355 aa14.18□□□□□ -0.14
VMP1-217ENST00000593168 HCSTQ9UBK5 93 aa14.18□□□□□ -0.14
VMP1-217ENST00000593168 CHORDC1Q9UHD1 332 aaPredicted RBP14.18□□□□□ -0.14
VMP1-217ENST00000593168 AMFRQ9UKV5 643 aa14.18□□□□□ -0.14
VMP1-217ENST00000593168 SNX12Q9UMY4 172 aa14.18□□□□□ -0.14
VMP1-217ENST00000593168 ALG6Q9Y672 507 aa14.18□□□□□ -0.14
VMP1-217ENST00000593168 TMEM191CA6NGB0 347 aa14.17□□□□□ -0.14
VMP1-217ENST00000593168 OR6C75A6NL08 312 aa14.17□□□□□ -0.14
VMP1-217ENST00000593168 FTCDO95954 541 aa14.17□□□□□ -0.14
VMP1-217ENST00000593168 ERBB2P04626 1255 aa14.17□□□□□ -0.14
VMP1-217ENST00000593168 RB1P06400 928 aa14.17□□□□□ -0.14
VMP1-217ENST00000593168 BTG3Q14201 252 aaPredicted RBP14.17□□□□□ -0.14
VMP1-217ENST00000593168 MESDQ14696 234 aa14.17□□□□□ -0.14
VMP1-217ENST00000593168 RPS6KA1Q15418 735 aa14.17□□□□□ -0.14
VMP1-217ENST00000593168 VARS2Q5ST30 1063 aaKnown RBP14.17□□□□□ -0.14
VMP1-217ENST00000593168 CYP4A22Q5TCH4 519 aa14.17□□□□□ -0.14
VMP1-217ENST00000593168 LLGL2Q6P1M3 1020 aa14.17□□□□□ -0.14
VMP1-217ENST00000593168 PHLDB2Q86SQ0 1253 aa14.17□□□□□ -0.14
VMP1-217ENST00000593168 ZDHHC17Q8IUH5 632 aa14.17□□□□□ -0.14
VMP1-217ENST00000593168 DCP1BQ8IZD4 617 aaKnown RBP14.17□□□□□ -0.14
VMP1-217ENST00000593168 PRSS33Q8NF86 280 aa14.17□□□□□ -0.14
VMP1-217ENST00000593168 OR10T2Q8NGX3 314 aa14.17□□□□□ -0.14
VMP1-217ENST00000593168 KCTD13Q8WZ19 329 aa14.17□□□□□ -0.14
VMP1-217ENST00000593168 MYLPFQ96A32 169 aa14.17□□□□□ -0.14
VMP1-217ENST00000593168 IGSF21Q96ID5 467 aa14.17□□□□□ -0.14
VMP1-217ENST00000593168 SELENOOQ9BVL4 669 aa14.17□□□□□ -0.14
VMP1-217ENST00000593168 ZCWPW1Q9H0M4 648 aa14.17□□□□□ -0.14
VMP1-217ENST00000593168 ST7Q9NRC1 585 aa14.17□□□□□ -0.14
VMP1-217ENST00000593168 IP6K2Q9UHH9 426 aa14.17□□□□□ -0.14
VMP1-217ENST00000593168 ANAPC7Q9UJX3 599 aa14.17□□□□□ -0.14
VMP1-217ENST00000593168 HYOU1Q9Y4L1 999 aa14.17□□□□□ -0.14
VMP1-217ENST00000593168 MRFAP1Q9Y605 127 aa14.17□□□□□ -0.14
VMP1-217ENST00000593168 USP34Q70CQ2 3546 aa14.17□□□□□ -0.14
VMP1-217ENST00000593168 KMT2EQ8IZD2 1858 aa14.16□□□□□ -0.14
VMP1-217ENST00000593168 NT5C1B-RDH14C9J2C7 533 aa14.16□□□□□ -0.14
VMP1-217ENST00000593168 E5RJQ4 531 aa14.16□□□□□ -0.14
VMP1-217ENST00000593168 H7C4K7 107 aa14.16□□□□□ -0.14
VMP1-217ENST00000593168 TULP2O00295 520 aa14.16□□□□□ -0.14
VMP1-217ENST00000593168 CLDN5O00501 218 aa14.16□□□□□ -0.14
VMP1-217ENST00000593168 PROSCO94903 275 aa14.16□□□□□ -0.14
VMP1-217ENST00000593168 FAM200BP0CF97 657 aa14.16□□□□□ -0.14
VMP1-217ENST00000593168 KRT3P12035 628 aa14.16□□□□□ -0.14
VMP1-217ENST00000593168 LAG3P18627 525 aa14.16□□□□□ -0.14
VMP1-217ENST00000593168 MAN1A1P33908 653 aa14.16□□□□□ -0.14
VMP1-217ENST00000593168 SCNN1AP37088 669 aa14.16□□□□□ -0.14
VMP1-217ENST00000593168 SLC1A1P43005 524 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms