RNA–Protein interactions for RNA: ENST00000592234.5

CIRBP-237, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5

Gene CIRBP, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-237ENST00000592234 AP3M2P53677 418 aa19.52■□□□□ 0.72
CIRBP-237ENST00000592234 CACNA2D1P54289 1103 aa19.52■□□□□ 0.72
CIRBP-237ENST00000592234 ZXDBP98169 803 aa19.52■□□□□ 0.72
CIRBP-237ENST00000592234 TAF10Q12962 218 aa19.52■□□□□ 0.72
CIRBP-237ENST00000592234 STK4Q13043 487 aa19.52■□□□□ 0.72
CIRBP-237ENST00000592234 ZNF699Q32M78 642 aa19.52■□□□□ 0.72
CIRBP-237ENST00000592234 PLEKHO2Q8TD55 490 aa19.52■□□□□ 0.72
CIRBP-237ENST00000592234 NETO1Q8TDF5 533 aa19.52■□□□□ 0.72
CIRBP-237ENST00000592234 PAGE5Q96GU1 130 aa19.52■□□□□ 0.72
CIRBP-237ENST00000592234 SLITRK1Q96PX8 696 aa19.52■□□□□ 0.72
CIRBP-237ENST00000592234 B3GNT5Q9BYG0 378 aa19.52■□□□□ 0.72
CIRBP-237ENST00000592234 POLR3BQ9NW08 1133 aaPredicted RBP19.52■□□□□ 0.72
CIRBP-237ENST00000592234 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.51■□□□□ 0.71
CIRBP-237ENST00000592234 DCDC2BA2VCK2 349 aa19.51■□□□□ 0.71
CIRBP-237ENST00000592234 LRRIQ3A6PVS8 624 aaPredicted RBP19.51■□□□□ 0.71
CIRBP-237ENST00000592234 SLC7A9P82251 487 aa19.51■□□□□ 0.71
CIRBP-237ENST00000592234 KMT5BQ4FZB7 885 aa19.51■□□□□ 0.71
CIRBP-237ENST00000592234 ZNF667Q5HYK9 610 aa19.51■□□□□ 0.71
CIRBP-237ENST00000592234 CACNA2D4Q7Z3S7 1137 aa19.51■□□□□ 0.71
CIRBP-237ENST00000592234 KIAA0895Q8NCT3 520 aa19.51■□□□□ 0.71
CIRBP-237ENST00000592234 PARD3BQ8TEW8 1205 aa19.51■□□□□ 0.71
CIRBP-237ENST00000592234 EZH1Q92800 747 aaPredicted RBP19.51■□□□□ 0.71
CIRBP-237ENST00000592234 ACDQ96AP0 544 aa19.51■□□□□ 0.71
CIRBP-237ENST00000592234 HHIPQ96QV1 700 aa19.51■□□□□ 0.71
CIRBP-237ENST00000592234 RNF38Q9H0F5 515 aa19.51■□□□□ 0.71
CIRBP-237ENST00000592234 SMYD3Q9H7B4 428 aa19.51■□□□□ 0.71
CIRBP-237ENST00000592234 VRTNQ9H8Y1 702 aa19.51■□□□□ 0.71
CIRBP-237ENST00000592234 TMEM30AQ9NV96 361 aa19.51■□□□□ 0.71
CIRBP-237ENST00000592234 ATP6V1DQ9Y5K8 247 aa19.51■□□□□ 0.71
CIRBP-237ENST00000592234 CPQQ9Y646 472 aa19.51■□□□□ 0.71
CIRBP-237ENST00000592234 ATP8B3O60423 1300 aa19.51■□□□□ 0.71
CIRBP-237ENST00000592234 AXIN1O15169 862 aa19.5■□□□□ 0.71
CIRBP-237ENST00000592234 FOXD2O60548 495 aaPredicted RBP19.5■□□□□ 0.71
CIRBP-237ENST00000592234 OLFM2O95897 454 aa19.5■□□□□ 0.71
CIRBP-237ENST00000592234 CMA1P23946 247 aa19.5■□□□□ 0.71
CIRBP-237ENST00000592234 RAP1GAPP47736 663 aa19.5■□□□□ 0.71
CIRBP-237ENST00000592234 CDH8P55286 799 aa19.5■□□□□ 0.71
CIRBP-237ENST00000592234 NCOA4Q13772 614 aa19.5■□□□□ 0.71
CIRBP-237ENST00000592234 SCARA5Q6ZMJ2 495 aa19.5■□□□□ 0.71
CIRBP-237ENST00000592234 SYT13Q7L8C5 426 aa19.5■□□□□ 0.71
CIRBP-237ENST00000592234 FILIP1Q7Z7B0 1213 aa19.5■□□□□ 0.71
CIRBP-237ENST00000592234 NUP93Q8N1F7 819 aa19.5■□□□□ 0.71
CIRBP-237ENST00000592234 CCDC26Q8TAB7 109 aa19.5■□□□□ 0.71
CIRBP-237ENST00000592234 MED10Q9BTT4 135 aa19.5■□□□□ 0.71
CIRBP-237ENST00000592234 SMPD4Q9NXE4 827 aa19.5■□□□□ 0.71
CIRBP-237ENST00000592234 SPTBN2O15020 2390 aa19.5■□□□□ 0.71
CIRBP-237ENST00000592234 AKAP3O75969 853 aa19.49■□□□□ 0.71
CIRBP-237ENST00000592234 RTN3O95197 1032 aaPredicted RBP19.49■□□□□ 0.71
CIRBP-237ENST00000592234 OAS1P00973 400 aaKnown RBP19.49■□□□□ 0.71
CIRBP-237ENST00000592234 C4BPAP04003 597 aaKnown RBP19.49■□□□□ 0.71
CIRBP-237ENST00000592234 MBL2P11226 248 aaPredicted RBP19.49■□□□□ 0.71
CIRBP-237ENST00000592234 YWHAQP27348 245 aa19.49■□□□□ 0.71
CIRBP-237ENST00000592234 NDUFA8P51970 172 aa19.49■□□□□ 0.71
CIRBP-237ENST00000592234 CLDN10P78369 228 aa19.49■□□□□ 0.71
CIRBP-237ENST00000592234 DMC1Q14565 340 aa19.49■□□□□ 0.71
CIRBP-237ENST00000592234 KBTBD6Q86V97 674 aa19.49■□□□□ 0.71
CIRBP-237ENST00000592234 SLC9A9Q8IVB4 645 aa19.49■□□□□ 0.71
CIRBP-237ENST00000592234 FBXO32Q969P5 355 aa19.49■□□□□ 0.71
CIRBP-237ENST00000592234 LOXL4Q96JB6 756 aa19.49■□□□□ 0.71
CIRBP-237ENST00000592234 TNIP3Q96KP6 325 aa19.49■□□□□ 0.71
CIRBP-237ENST00000592234 ARRDC1-AS1Q9H2J1 176 aa19.49■□□□□ 0.71
CIRBP-237ENST00000592234 DMAC2Q9NW81 257 aa19.49■□□□□ 0.71
CIRBP-237ENST00000592234 HPSEQ9Y251 543 aa19.49■□□□□ 0.71
CIRBP-237ENST00000592234 PDXKO00764 312 aa19.48■□□□□ 0.71
CIRBP-237ENST00000592234 SLC9A3R1O14745 358 aaPredicted RBP19.48■□□□□ 0.71
CIRBP-237ENST00000592234 SLC30A4O14863 429 aa19.48■□□□□ 0.71
CIRBP-237ENST00000592234 OPRD1P41143 372 aa19.48■□□□□ 0.71
CIRBP-237ENST00000592234 SYKP43405 635 aa19.48■□□□□ 0.71
CIRBP-237ENST00000592234 FAM35AQ86V20 835 aa19.48■□□□□ 0.71
CIRBP-237ENST00000592234 DDX42Q86XP3 938 aaKnown RBP eCLIP19.48■□□□□ 0.712e-6■■■□□ 17.9
CIRBP-237ENST00000592234 KIAA1958Q8N8K9 716 aa19.48■□□□□ 0.71
CIRBP-237ENST00000592234 PDZD8Q8NEN9 1154 aa19.48■□□□□ 0.71
CIRBP-237ENST00000592234 OVCA2Q8WZ82 227 aa19.48■□□□□ 0.71
CIRBP-237ENST00000592234 ELMO3Q96BJ8 720 aa19.48■□□□□ 0.71
CIRBP-237ENST00000592234 KCNK16Q96T55 309 aa19.48■□□□□ 0.71
CIRBP-237ENST00000592234 SCAND2PQ9GZW5 306 aaPredicted RBP19.48■□□□□ 0.71
CIRBP-237ENST00000592234 KCTD10Q9H3F6 313 aa19.48■□□□□ 0.71
CIRBP-237ENST00000592234 GOLPH3LQ9H4A5 285 aa19.48■□□□□ 0.71
CIRBP-237ENST00000592234 CFAP97Q9P2B7 532 aa19.48■□□□□ 0.71
CIRBP-237ENST00000592234 USP25Q9UHP3 1055 aa19.48■□□□□ 0.71
CIRBP-237ENST00000592234 NCOR2Q9Y618 2525 aa19.48■□□□□ 0.71
CIRBP-237ENST00000592234 SCAMP3O14828 347 aaKnown RBP19.47■□□□□ 0.71
CIRBP-237ENST00000592234 GDF9O60383 454 aa19.47■□□□□ 0.71
CIRBP-237ENST00000592234 EPN2O95208 641 aa19.47■□□□□ 0.71
CIRBP-237ENST00000592234 VNN1O95497 513 aa19.47■□□□□ 0.71
CIRBP-237ENST00000592234 APBB3O95704 486 aa19.47■□□□□ 0.71
CIRBP-237ENST00000592234 NR3C1P04150 777 aa19.47■□□□□ 0.71
CIRBP-237ENST00000592234 CYP17A1P05093 508 aa19.47■□□□□ 0.71
CIRBP-237ENST00000592234 MYL1P05976 194 aa19.47■□□□□ 0.71
CIRBP-237ENST00000592234 PRR29P0C7W0 189 aa19.47■□□□□ 0.71
CIRBP-237ENST00000592234 P4HA1P13674 534 aa19.47■□□□□ 0.71
CIRBP-237ENST00000592234 SEC13P55735 322 aa19.47■□□□□ 0.71
CIRBP-237ENST00000592234 DLG4P78352 724 aa19.47■□□□□ 0.71
CIRBP-237ENST00000592234 AASDHQ4L235 1098 aaPredicted RBP19.47■□□□□ 0.71
CIRBP-237ENST00000592234 ADGRG2Q8IZP9 1017 aa19.47■□□□□ 0.71
CIRBP-237ENST00000592234 C12orf50Q8NA57 414 aaPredicted RBP19.47■□□□□ 0.71
CIRBP-237ENST00000592234 TMEM174Q8WUU8 243 aa19.47■□□□□ 0.71
CIRBP-237ENST00000592234 SMARCD1Q96GM5 515 aa19.47■□□□□ 0.71
CIRBP-237ENST00000592234 DMAP1Q9NPF5 467 aaPredicted RBP19.47■□□□□ 0.71
CIRBP-237ENST00000592234 THADAQ6YHU6 1953 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms