RNA–Protein interactions for RNA: ENST00000592054.5

DNMT1-226, Transcript of DNA methyltransferase 1, humanhuman

TSL 4

Gene DNMT1, Length 591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-226ENST00000592054 SPDYAQ5MJ70 313 aa3.9□□□□□ -1.79
DNMT1-226ENST00000592054 MTDHQ86UE4 582 aaKnown RBP3.9□□□□□ -1.79
DNMT1-226ENST00000592054 OSTM1Q86WC4 334 aa3.9□□□□□ -1.79
DNMT1-226ENST00000592054 REPS2Q8NFH8 660 aa3.9□□□□□ -1.79
DNMT1-226ENST00000592054 PHOSPHO1Q8TCT1 267 aa3.9□□□□□ -1.79
DNMT1-226ENST00000592054 PTPRN2Q92932 1015 aa3.9□□□□□ -1.79
DNMT1-226ENST00000592054 NSUN4Q96CB9 384 aaKnown RBP3.9□□□□□ -1.79
DNMT1-226ENST00000592054 ZFYVE21Q9BQ24 234 aa3.9□□□□□ -1.79
DNMT1-226ENST00000592054 SLF1Q9BQI6 1058 aa3.9□□□□□ -1.79
DNMT1-226ENST00000592054 ACAD9Q9H845 621 aa3.9□□□□□ -1.79
DNMT1-226ENST00000592054 KANSL2Q9H9L4 492 aa3.9□□□□□ -1.79
DNMT1-226ENST00000592054 LTB4R2Q9NPC1 389 aa3.9□□□□□ -1.79
DNMT1-226ENST00000592054 TMEM9BQ9NQ34 198 aa3.9□□□□□ -1.79
DNMT1-226ENST00000592054 TCP11L1Q9NUJ3 509 aa3.9□□□□□ -1.79
DNMT1-226ENST00000592054 NDOR1Q9UHB4 597 aa3.9□□□□□ -1.79
DNMT1-226ENST00000592054 DSEQ9UL01 958 aa3.9□□□□□ -1.79
DNMT1-226ENST00000592054 MRPS17Q9Y2R5 130 aaKnown RBP3.9□□□□□ -1.79
DNMT1-226ENST00000592054 TMX2Q9Y320 296 aa3.9□□□□□ -1.79
DNMT1-226ENST00000592054 DDX49Q9Y6V7 483 aaKnown RBP3.9□□□□□ -1.79
DNMT1-226ENST00000592054 NUP205Q92621 2012 aa3.9□□□□□ -1.79
DNMT1-226ENST00000592054 PDS5AQ29RF7 1337 aaKnown RBP3.9□□□□□ -1.79
DNMT1-226ENST00000592054 CSMD1Q96PZ7 3565 aa3.89□□□□□ -1.79
DNMT1-226ENST00000592054 F8P00451 2351 aa3.89□□□□□ -1.79
DNMT1-226ENST00000592054 COL5A1P20908 1838 aaPredicted RBP3.89□□□□□ -1.79
DNMT1-226ENST00000592054 FAM90A27PA6NNH2 459 aa3.89□□□□□ -1.79
DNMT1-226ENST00000592054 MAN2B1O00754 1011 aa3.89□□□□□ -1.79
DNMT1-226ENST00000592054 ATP2A1O14983 1001 aa3.89□□□□□ -1.79
DNMT1-226ENST00000592054 MUSKO15146 869 aa3.89□□□□□ -1.79
DNMT1-226ENST00000592054 B4GALT3O60512 393 aa3.89□□□□□ -1.79
DNMT1-226ENST00000592054 CYP1A1P04798 512 aaPredicted RBP3.89□□□□□ -1.79
DNMT1-226ENST00000592054 STAG3L1P0CL83 205 aa3.89□□□□□ -1.79
DNMT1-226ENST00000592054 TDGF1P13385 188 aa3.89□□□□□ -1.79
DNMT1-226ENST00000592054 PDE6AP16499 860 aa3.89□□□□□ -1.79
DNMT1-226ENST00000592054 FAHP16930 419 aa3.89□□□□□ -1.79
DNMT1-226ENST00000592054 POU3F2P20265 443 aaPredicted RBP3.89□□□□□ -1.79
DNMT1-226ENST00000592054 ELAVL4P26378 380 aaKnown RBP3.89□□□□□ -1.79
DNMT1-226ENST00000592054 MPLP40238 635 aa3.89□□□□□ -1.79
DNMT1-226ENST00000592054 TMPOP42166 694 aaKnown RBP3.89□□□□□ -1.79
DNMT1-226ENST00000592054 GLRBP48167 497 aa3.89□□□□□ -1.79
DNMT1-226ENST00000592054 FNTBP49356 437 aa3.89□□□□□ -1.79
DNMT1-226ENST00000592054 DNM2P50570 870 aa3.89□□□□□ -1.79
DNMT1-226ENST00000592054 PFKPQ01813 784 aa3.89□□□□□ -1.79
DNMT1-226ENST00000592054 KRT17Q04695 432 aa3.89□□□□□ -1.79
DNMT1-226ENST00000592054 ICA1Q05084 483 aa3.89□□□□□ -1.79
DNMT1-226ENST00000592054 SPIRE1Q08AE8 756 aa3.89□□□□□ -1.79
DNMT1-226ENST00000592054 PAK1Q13153 545 aa3.89□□□□□ -1.79
DNMT1-226ENST00000592054 LY6DQ14210 128 aa3.89□□□□□ -1.79
DNMT1-226ENST00000592054 SMC1AQ14683 1233 aaKnown RBP3.89□□□□□ -1.79
DNMT1-226ENST00000592054 SMN1Q16637 294 aaKnown RBP3.89□□□□□ -1.79
DNMT1-226ENST00000592054 SLC44A4Q53GD3 710 aa3.89□□□□□ -1.79
DNMT1-226ENST00000592054 FAM83BQ5T0W9 1011 aa3.89□□□□□ -1.79
DNMT1-226ENST00000592054 TCEAL6Q6IPX3 200 aa3.89□□□□□ -1.79
DNMT1-226ENST00000592054 ARHGAP36Q6ZRI8 547 aa3.89□□□□□ -1.79
DNMT1-226ENST00000592054 TMEM179Q6ZVK1 233 aa3.89□□□□□ -1.79
DNMT1-226ENST00000592054 KCTD1Q719H9 257 aa3.89□□□□□ -1.79
DNMT1-226ENST00000592054 RASGRP2Q7LDG7 609 aa3.89□□□□□ -1.79
DNMT1-226ENST00000592054 CACNA2D4Q7Z3S7 1137 aa3.89□□□□□ -1.79
DNMT1-226ENST00000592054 FGD2Q7Z6J4 655 aa3.89□□□□□ -1.79
DNMT1-226ENST00000592054 PNPLA5Q7Z6Z6 429 aaPredicted RBP3.89□□□□□ -1.79
DNMT1-226ENST00000592054 GPR149Q86SP6 731 aa3.89□□□□□ -1.79
DNMT1-226ENST00000592054 LONP2Q86WA8 852 aa3.89□□□□□ -1.79
DNMT1-226ENST00000592054 PTRH1Q86Y79 214 aaKnown RBP3.89□□□□□ -1.79
DNMT1-226ENST00000592054 KLHDC4Q8TBB5 520 aa3.89□□□□□ -1.79
DNMT1-226ENST00000592054 IGDCC4Q8TDY8 1250 aa3.89□□□□□ -1.79
DNMT1-226ENST00000592054 ZNF384Q8TF68 577 aa3.89□□□□□ -1.79
DNMT1-226ENST00000592054 TCEAL3Q969E4 200 aa3.89□□□□□ -1.79
DNMT1-226ENST00000592054 CLDN23Q96B33 292 aa3.89□□□□□ -1.79
DNMT1-226ENST00000592054 MPHOSPH6Q99547 160 aaKnown RBP3.89□□□□□ -1.79
DNMT1-226ENST00000592054 DDX23Q9BUQ8 820 aaKnown RBP3.89□□□□□ -1.79
DNMT1-226ENST00000592054 SFXN1Q9H9B4 322 aa3.89□□□□□ -1.79
DNMT1-226ENST00000592054 RAVER2Q9HCJ3 691 aaKnown RBP3.89□□□□□ -1.79
DNMT1-226ENST00000592054 PCDH18Q9HCL0 1135 aa3.89□□□□□ -1.79
DNMT1-226ENST00000592054 CD248Q9HCU0 757 aa3.89□□□□□ -1.79
DNMT1-226ENST00000592054 LZTS1Q9Y250 596 aa3.89□□□□□ -1.79
DNMT1-226ENST00000592054 PCDHGA5Q9Y5G8 931 aa3.89□□□□□ -1.79
DNMT1-226ENST00000592054 LCTP09848 1927 aa3.89□□□□□ -1.79
DNMT1-226ENST00000592054 GOLGA4Q13439 2230 aaKnown RBP3.89□□□□□ -1.79
DNMT1-226ENST00000592054 LAMA4Q16363 1823 aa3.88□□□□□ -1.79
DNMT1-226ENST00000592054 MTORP42345 2549 aa3.88□□□□□ -1.79
DNMT1-226ENST00000592054 NPIPB8E9PQR5 432 aa3.88□□□□□ -1.79
DNMT1-226ENST00000592054 AQP7O14520 342 aa3.88□□□□□ -1.79
DNMT1-226ENST00000592054 ENPP3O14638 875 aa3.88□□□□□ -1.79
DNMT1-226ENST00000592054 GPR42O15529 346 aa3.88□□□□□ -1.79
DNMT1-226ENST00000592054 CLASP2O75122 1294 aaKnown RBP3.88□□□□□ -1.79
DNMT1-226ENST00000592054 CAND2O75155 1236 aa3.88□□□□□ -1.79
DNMT1-226ENST00000592054 IL18BPO95998 194 aa3.88□□□□□ -1.79
DNMT1-226ENST00000592054 CCDC192P0DO97 292 aa3.88□□□□□ -1.79
DNMT1-226ENST00000592054 TXNP10599 105 aaKnown RBP3.88□□□□□ -1.79
DNMT1-226ENST00000592054 IBSPP21815 317 aaPredicted RBP3.88□□□□□ -1.79
DNMT1-226ENST00000592054 PPP2R1AP30153 589 aa3.88□□□□□ -1.79
DNMT1-226ENST00000592054 SHMT1P34896 483 aa3.88□□□□□ -1.79
DNMT1-226ENST00000592054 IL12RB1P42701 662 aa3.88□□□□□ -1.79
DNMT1-226ENST00000592054 CXCL12P48061 93 aa3.88□□□□□ -1.79
DNMT1-226ENST00000592054 SELENOPP49908 381 aa3.88□□□□□ -1.79
DNMT1-226ENST00000592054 GPC5P78333 572 aa3.88□□□□□ -1.79
DNMT1-226ENST00000592054 GABREP78334 506 aa3.88□□□□□ -1.79
DNMT1-226ENST00000592054 SEC23AQ15436 765 aa3.88□□□□□ -1.79
DNMT1-226ENST00000592054 SF3A1Q15459 793 aaKnown RBP3.88□□□□□ -1.79
DNMT1-226ENST00000592054 DGKDQ16760 1214 aa3.88□□□□□ -1.79
DNMT1-226ENST00000592054 SKIDA1Q1XH10 827 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms