RNA–Protein interactions for RNA: ENST00000592051.1

CIRBP-236, Transcript of cold inducible RNA binding protein, human

TSL 4

Gene CIRBP, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-236	ENST00000592051	PDCL	Q13371	301 aa		11.96	□□□□□ -0.49
CIRBP-236	ENST00000592051	CLEC16A	Q2KHT3	1053 aa		11.96	□□□□□ -0.49
CIRBP-236	ENST00000592051	PTPN20	Q4JDL3	420 aa		11.96	□□□□□ -0.49
CIRBP-236	ENST00000592051	NAA35	Q5VZE5	725 aa		11.96	□□□□□ -0.49
CIRBP-236	ENST00000592051	EP400NL	Q6ZTU2	488 aa		11.96	□□□□□ -0.49
CIRBP-236	ENST00000592051	GRASP	Q7Z6J2	395 aa	Predicted RBP	11.96	□□□□□ -0.49
CIRBP-236	ENST00000592051	TMEM139	Q8IV31	216 aa		11.96	□□□□□ -0.49
CIRBP-236	ENST00000592051	CNGA4	Q8IV77	575 aa		11.96	□□□□□ -0.49
CIRBP-236	ENST00000592051	NUP93	Q8N1F7	819 aa		11.96	□□□□□ -0.49
CIRBP-236	ENST00000592051	CPA5	Q8WXQ8	436 aa		11.96	□□□□□ -0.49
CIRBP-236	ENST00000592051	SMG7	Q92540	1137 aa	Known RBP	11.96	□□□□□ -0.49
CIRBP-236	ENST00000592051	NDRG1	Q92597	394 aa	Known RBP	11.96	□□□□□ -0.49
CIRBP-236	ENST00000592051	TCEAL4	Q96EI5	215 aa		11.96	□□□□□ -0.49
CIRBP-236	ENST00000592051	PDLIM2	Q96JY6	352 aa		11.96	□□□□□ -0.49
CIRBP-236	ENST00000592051	MYRFL	Q96LU7	910 aa		11.96	□□□□□ -0.49
CIRBP-236	ENST00000592051	CEP295NL	Q96MC4	621 aa		11.96	□□□□□ -0.49
CIRBP-236	ENST00000592051	CPXM1	Q96SM3	734 aa		11.96	□□□□□ -0.49
CIRBP-236	ENST00000592051	ADAM7	Q9H2U9	754 aa		11.96	□□□□□ -0.49
CIRBP-236	ENST00000592051	PNPLA8	Q9NP80	782 aa		11.96	□□□□□ -0.49
CIRBP-236	ENST00000592051	IMPACT	Q9P2X3	320 aa		11.96	□□□□□ -0.49
CIRBP-236	ENST00000592051	DPP7	Q9UHL4	492 aa		11.96	□□□□□ -0.49
CIRBP-236	ENST00000592051	ASB3	Q9Y575	518 aa		11.96	□□□□□ -0.49
CIRBP-236	ENST00000592051	USP3	Q9Y6I4	520 aa		11.96	□□□□□ -0.49
CIRBP-236	ENST00000592051	BRWD1	Q9NSI6	2320 aa		11.95	□□□□□ -0.5
CIRBP-236	ENST00000592051		A0A087X0T9	212 aa		11.95	□□□□□ -0.5
CIRBP-236	ENST00000592051	LSM8	O95777	96 aa	Known RBP	11.95	□□□□□ -0.5
CIRBP-236	ENST00000592051	F11	P03951	625 aa		11.95	□□□□□ -0.5
CIRBP-236	ENST00000592051	ERBB2	P04626	1255 aa		11.95	□□□□□ -0.5
CIRBP-236	ENST00000592051	FAM228B	P0C875	321 aa		11.95	□□□□□ -0.5
CIRBP-236	ENST00000592051	CSH1	P0DML2	217 aa		11.95	□□□□□ -0.5
CIRBP-236	ENST00000592051	CSH2	P0DML3	217 aa		11.95	□□□□□ -0.5
CIRBP-236	ENST00000592051	TNFAIP3	P21580	790 aa		11.95	□□□□□ -0.5
CIRBP-236	ENST00000592051	KCNA5	P22460	613 aa		11.95	□□□□□ -0.5
CIRBP-236	ENST00000592051	ANXA13	P27216	316 aa		11.95	□□□□□ -0.5
CIRBP-236	ENST00000592051	CDK17	Q00537	523 aa		11.95	□□□□□ -0.5
CIRBP-236	ENST00000592051	MAPK8IP2	Q13387	824 aa	Predicted RBP	11.95	□□□□□ -0.5
CIRBP-236	ENST00000592051	PLD1	Q13393	1074 aa		11.95	□□□□□ -0.5
CIRBP-236	ENST00000592051	SLC5A9	Q2M3M2	681 aa		11.95	□□□□□ -0.5
CIRBP-236	ENST00000592051	C2CD6	Q53TS8	623 aa		11.95	□□□□□ -0.5
CIRBP-236	ENST00000592051	PRSS36	Q5K4E3	855 aa		11.95	□□□□□ -0.5
CIRBP-236	ENST00000592051	DENND5B	Q6ZUT9	1274 aa		11.95	□□□□□ -0.5
CIRBP-236	ENST00000592051	GAREM2	Q75VX8	874 aa		11.95	□□□□□ -0.5
CIRBP-236	ENST00000592051	SCD5	Q86SK9	330 aa		11.95	□□□□□ -0.5
CIRBP-236	ENST00000592051	TMEM110	Q86TL2	294 aa		11.95	□□□□□ -0.5
CIRBP-236	ENST00000592051	SMRP1	Q8NCR6	262 aa		11.95	□□□□□ -0.5
CIRBP-236	ENST00000592051	TMEM35B	Q8NCS4	154 aa		11.95	□□□□□ -0.5
CIRBP-236	ENST00000592051	CLEC4C	Q8WTT0	213 aa		11.95	□□□□□ -0.5
CIRBP-236	ENST00000592051	SUSD6	Q92537	303 aa		11.95	□□□□□ -0.5
CIRBP-236	ENST00000592051	TRMT2B	Q96GJ1	504 aa	Known RBP	11.95	□□□□□ -0.5
CIRBP-236	ENST00000592051	HSFY1	Q96LI6	401 aa		11.95	□□□□□ -0.5
CIRBP-236	ENST00000592051	PANX2	Q96RD6	677 aa		11.95	□□□□□ -0.5
CIRBP-236	ENST00000592051	CORO1B	Q9BR76	489 aa		11.95	□□□□□ -0.5
CIRBP-236	ENST00000592051	ULBP1	Q9BZM6	244 aa		11.95	□□□□□ -0.5
CIRBP-236	ENST00000592051	CD207	Q9UJ71	328 aa		11.95	□□□□□ -0.5
CIRBP-236	ENST00000592051		E5RJQ4	531 aa		11.94	□□□□□ -0.5
CIRBP-236	ENST00000592051	ZNF263	O14978	683 aa		11.94	□□□□□ -0.5
CIRBP-236	ENST00000592051	PAPSS1	O43252	624 aa	Predicted RBP	11.94	□□□□□ -0.5
CIRBP-236	ENST00000592051	XYLB	O75191	536 aa		11.94	□□□□□ -0.5
CIRBP-236	ENST00000592051	RHO	P08100	348 aa		11.94	□□□□□ -0.5
CIRBP-236	ENST00000592051	TPM1	P09493	284 aa		11.94	□□□□□ -0.5
CIRBP-236	ENST00000592051	ZDHHC11B	P0C7U3	371 aa		11.94	□□□□□ -0.5
CIRBP-236	ENST00000592051	CCDC172	P0C7W6	258 aa		11.94	□□□□□ -0.5
CIRBP-236	ENST00000592051	SRGAP2B	P0DMP2	458 aa		11.94	□□□□□ -0.5
CIRBP-236	ENST00000592051	LCP1	P13796	627 aa		11.94	□□□□□ -0.5
CIRBP-236	ENST00000592051	GJA1	P17302	382 aa		11.94	□□□□□ -0.5
CIRBP-236	ENST00000592051	PTPN2	P17706	415 aa		11.94	□□□□□ -0.5
CIRBP-236	ENST00000592051	MMP8	P22894	467 aa		11.94	□□□□□ -0.5
CIRBP-236	ENST00000592051	TKTL1	P51854	596 aa		11.94	□□□□□ -0.5
CIRBP-236	ENST00000592051	TFF2	Q03403	129 aa		11.94	□□□□□ -0.5
CIRBP-236	ENST00000592051	ADIG	Q0VDE8	80 aa		11.94	□□□□□ -0.5
CIRBP-236	ENST00000592051	TAF10	Q12962	218 aa		11.94	□□□□□ -0.5
CIRBP-236	ENST00000592051	VEPH1	Q14D04	833 aa		11.94	□□□□□ -0.5
CIRBP-236	ENST00000592051	SKIV2L	Q15477	1246 aa	Known RBP	11.94	□□□□□ -0.5
CIRBP-236	ENST00000592051	PM20D1	Q6GTS8	502 aa		11.94	□□□□□ -0.5
CIRBP-236	ENST00000592051	ELMSAN1	Q6PJG2	1045 aa		11.94	□□□□□ -0.5
CIRBP-236	ENST00000592051	TRIM72	Q6ZMU5	477 aa		11.94	□□□□□ -0.5
CIRBP-236	ENST00000592051	CCDC186	Q7Z3E2	898 aa		11.94	□□□□□ -0.5
CIRBP-236	ENST00000592051	FMNL3	Q8IVF7	1028 aa		11.94	□□□□□ -0.5
CIRBP-236	ENST00000592051	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	11.94	□□□□□ -0.5
CIRBP-236	ENST00000592051	ITFG1	Q8TB96	612 aa		11.94	□□□□□ -0.5
CIRBP-236	ENST00000592051	SHKBP1	Q8TBC3	707 aa		11.94	□□□□□ -0.5
CIRBP-236	ENST00000592051	KHSRP	Q92945	711 aa	Known RBP eCLIP	11.94	□□□□□ -0.5
CIRBP-236	ENST00000592051	HLA-C	Q95604	372 aa		11.94	□□□□□ -0.5
CIRBP-236	ENST00000592051	PIWIL1	Q96J94	861 aa	Known RBP	11.94	□□□□□ -0.5
CIRBP-236	ENST00000592051	PPP1R13B	Q96KQ4	1090 aa		11.94	□□□□□ -0.5
CIRBP-236	ENST00000592051	ZNF512	Q96ME7	567 aa	Predicted RBP	11.94	□□□□□ -0.5
CIRBP-236	ENST00000592051	NMUR1	Q9HB89	426 aa		11.94	□□□□□ -0.5
CIRBP-236	ENST00000592051	AVEN	Q9NQS1	362 aa	Predicted RBP	11.94	□□□□□ -0.5
CIRBP-236	ENST00000592051	OSER1	Q9NX31	292 aa		11.94	□□□□□ -0.5
CIRBP-236	ENST00000592051	ADAMTS1	Q9UHI8	967 aa		11.94	□□□□□ -0.5
CIRBP-236	ENST00000592051	MAGED2	Q9UNF1	606 aa	Predicted RBP	11.94	□□□□□ -0.5
CIRBP-236	ENST00000592051	SCML2	Q9UQR0	700 aa		11.94	□□□□□ -0.5
CIRBP-236	ENST00000592051	USP15	Q9Y4E8	981 aa	Predicted RBP	11.94	□□□□□ -0.5
CIRBP-236	ENST00000592051	BZW2	Q9Y6E2	419 aa	Known RBP	11.94	□□□□□ -0.5
CIRBP-236	ENST00000592051	PTPRD	P23468	1912 aa		11.94	□□□□□ -0.5
CIRBP-236	ENST00000592051	SSU72P8	A0A1W2PR75	194 aa		11.93	□□□□□ -0.5
CIRBP-236	ENST00000592051	RTN3	O95197	1032 aa	Predicted RBP	11.93	□□□□□ -0.5
CIRBP-236	ENST00000592051	USP17L7	P0C7H9	530 aa		11.93	□□□□□ -0.5
CIRBP-236	ENST00000592051	MYL4	P12829	197 aa		11.93	□□□□□ -0.5
CIRBP-236	ENST00000592051	YWHAQ	P27348	245 aa		11.93	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms