RNA–Protein interactions for RNA: ENST00000592017.5

CLIP3-205, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 5

Gene CLIP3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-205ENST00000592017 DDX6P26196 483 aaKnown RBP eCLIP14.77□□□□□ -0.05
CLIP3-205ENST00000592017 KPNA1P52294 538 aaPredicted RBP14.77□□□□□ -0.05
CLIP3-205ENST00000592017 USP46P62068 366 aa14.77□□□□□ -0.05
CLIP3-205ENST00000592017 CETN1Q12798 172 aa14.77□□□□□ -0.05
CLIP3-205ENST00000592017 MTAPQ13126 283 aa14.77□□□□□ -0.05
CLIP3-205ENST00000592017 ARHGAP29Q52LW3 1261 aa14.77□□□□□ -0.05
CLIP3-205ENST00000592017 TXNDC11Q6PKC3 985 aa14.77□□□□□ -0.05
CLIP3-205ENST00000592017 TRIM59Q8IWR1 403 aa14.77□□□□□ -0.05
CLIP3-205ENST00000592017 FUKQ8N0W3 1084 aa14.77□□□□□ -0.05
CLIP3-205ENST00000592017 CELF5Q8N6W0 485 aaKnown RBP14.77□□□□□ -0.05
CLIP3-205ENST00000592017 CSGALNACT1Q8TDX6 532 aa14.77□□□□□ -0.05
CLIP3-205ENST00000592017 C8orf48Q96LL4 319 aa14.77□□□□□ -0.05
CLIP3-205ENST00000592017 MED15Q96RN5 788 aa14.77□□□□□ -0.05
CLIP3-205ENST00000592017 DNAI2Q9GZS0 605 aa14.77□□□□□ -0.05
CLIP3-205ENST00000592017 LMAN1LQ9HAT1 526 aa14.77□□□□□ -0.05
CLIP3-205ENST00000592017 DMAP1Q9NPF5 467 aaPredicted RBP14.77□□□□□ -0.05
CLIP3-205ENST00000592017 GKN1Q9NS71 199 aa14.77□□□□□ -0.05
CLIP3-205ENST00000592017 CISHQ9NSE2 258 aa14.77□□□□□ -0.05
CLIP3-205ENST00000592017 GTSE1Q9NYZ3 720 aa14.77□□□□□ -0.05
CLIP3-205ENST00000592017 ZMYM5Q9UJ78 669 aa14.77□□□□□ -0.05
CLIP3-205ENST00000592017 COQ4Q9Y3A0 265 aa14.77□□□□□ -0.05
CLIP3-205ENST00000592017 FAM186AA6NE01 2351 aa14.77□□□□□ -0.05
CLIP3-205ENST00000592017 SOBPA7XYQ1 873 aa14.76□□□□□ -0.05
CLIP3-205ENST00000592017 LAMTOR5O43504 91 aa14.76□□□□□ -0.05
CLIP3-205ENST00000592017 MBD3O95983 291 aa14.76□□□□□ -0.05
CLIP3-205ENST00000592017 AVPR1AP37288 418 aa14.76□□□□□ -0.05
CLIP3-205ENST00000592017 MARSP56192 900 aaKnown RBP14.76□□□□□ -0.05
CLIP3-205ENST00000592017 CSTF1Q05048 431 aaKnown RBP14.76□□□□□ -0.05
CLIP3-205ENST00000592017 KCNH2Q12809 1159 aa14.76□□□□□ -0.05
CLIP3-205ENST00000592017 CUL2Q13617 745 aa14.76□□□□□ -0.05
CLIP3-205ENST00000592017 PAQR9Q6ZVX9 377 aa14.76□□□□□ -0.05
CLIP3-205ENST00000592017 CRYBG2Q8N1P7 616 aa14.76□□□□□ -0.05
CLIP3-205ENST00000592017 TTC16Q8NEE8 873 aa14.76□□□□□ -0.05
CLIP3-205ENST00000592017 WHAMMQ8TF30 809 aa14.76□□□□□ -0.05
CLIP3-205ENST00000592017 JAKMIP2Q96AA8 810 aa14.76□□□□□ -0.05
CLIP3-205ENST00000592017 NT5C1BQ96P26 610 aa14.76□□□□□ -0.05
CLIP3-205ENST00000592017 SLC22A12Q96S37 553 aa14.76□□□□□ -0.05
CLIP3-205ENST00000592017 CYP2S1Q96SQ9 504 aa14.76□□□□□ -0.05
CLIP3-205ENST00000592017 KCNK16Q96T55 309 aa14.76□□□□□ -0.05
CLIP3-205ENST00000592017 FAM83CQ9BQN1 747 aa14.76□□□□□ -0.05
CLIP3-205ENST00000592017 CHRDQ9H2X0 955 aa14.76□□□□□ -0.05
CLIP3-205ENST00000592017 C8orf33Q9H7E9 229 aaPredicted RBP14.76□□□□□ -0.05
CLIP3-205ENST00000592017 FBXO4Q9UKT5 387 aa14.76□□□□□ -0.05
CLIP3-205ENST00000592017 SPECC1L-ADORA2AF8WAN1 911 aa14.75□□□□□ -0.05
CLIP3-205ENST00000592017 ABL1P00519 1130 aa14.75□□□□□ -0.05
CLIP3-205ENST00000592017 FAM200BP0CF97 657 aa14.75□□□□□ -0.05
CLIP3-205ENST00000592017 CTHP32929 405 aa14.75□□□□□ -0.05
CLIP3-205ENST00000592017 MTIF2P46199 727 aaKnown RBP14.75□□□□□ -0.05
CLIP3-205ENST00000592017 SLC5A3P53794 718 aa14.75□□□□□ -0.05
CLIP3-205ENST00000592017 MAP3K7CLP57077 242 aa14.75□□□□□ -0.05
CLIP3-205ENST00000592017 PLCB2Q00722 1185 aa14.75□□□□□ -0.05
CLIP3-205ENST00000592017 GAS6Q14393 721 aa14.75□□□□□ -0.05
CLIP3-205ENST00000592017 ZNF528Q3MIS6 628 aa14.75□□□□□ -0.05
CLIP3-205ENST00000592017 HSP90AA4PQ58FG1 418 aa14.75□□□□□ -0.05
CLIP3-205ENST00000592017 TSSK4Q6SA08 328 aa14.75□□□□□ -0.05
CLIP3-205ENST00000592017 PPM1KQ8N3J5 372 aa14.75□□□□□ -0.05
CLIP3-205ENST00000592017 TTC39CQ8N584 583 aa14.75□□□□□ -0.05
CLIP3-205ENST00000592017 CYFIP2Q96F07 1278 aa14.75□□□□□ -0.05
CLIP3-205ENST00000592017 FAXDC2Q96IV6 333 aa14.75□□□□□ -0.05
CLIP3-205ENST00000592017 CEP295NLQ96MC4 621 aa14.75□□□□□ -0.05
CLIP3-205ENST00000592017 HEXIM2Q96MH2 286 aaKnown RBP14.75□□□□□ -0.05
CLIP3-205ENST00000592017 HPS4Q9NQG7 708 aa14.75□□□□□ -0.05
CLIP3-205ENST00000592017 TDP1Q9NUW8 608 aa14.75□□□□□ -0.05
CLIP3-205ENST00000592017 THG1LQ9NWX6 298 aaKnown RBP14.75□□□□□ -0.05
CLIP3-205ENST00000592017 EHD2Q9NZN4 543 aa14.75□□□□□ -0.05
CLIP3-205ENST00000592017 GCNT4Q9P109 453 aa14.75□□□□□ -0.05
CLIP3-205ENST00000592017 C2orf78A6NCI8 922 aa14.74□□□□□ -0.05
CLIP3-205ENST00000592017 OTOL1A6NHN0 477 aaPredicted RBP14.74□□□□□ -0.05
CLIP3-205ENST00000592017 P4HA2O15460 535 aa14.74□□□□□ -0.05
CLIP3-205ENST00000592017 BEST1O76090 585 aa14.74□□□□□ -0.05
CLIP3-205ENST00000592017 TBXAS1P24557 533 aaPredicted RBP14.74□□□□□ -0.05
CLIP3-205ENST00000592017 YWHAEP62258 255 aaKnown RBP14.74□□□□□ -0.05
CLIP3-205ENST00000592017 ZNF268Q14587 947 aaPredicted RBP14.74□□□□□ -0.05
CLIP3-205ENST00000592017 TRIM68Q6AZZ1 485 aa14.74□□□□□ -0.05
CLIP3-205ENST00000592017 MAMSTRQ6ZN01 415 aa14.74□□□□□ -0.05
CLIP3-205ENST00000592017 RALGPS2Q86X27 583 aaPredicted RBP14.74□□□□□ -0.05
CLIP3-205ENST00000592017 NUP93Q8N1F7 819 aa14.74□□□□□ -0.05
CLIP3-205ENST00000592017 NELL1Q92832 810 aa14.74□□□□□ -0.05
CLIP3-205ENST00000592017 FBXO32Q969P5 355 aa14.74□□□□□ -0.05
CLIP3-205ENST00000592017 MSANTD3Q96H12 275 aa14.74□□□□□ -0.05
CLIP3-205ENST00000592017 TMEM176AQ96HP8 235 aa14.74□□□□□ -0.05
CLIP3-205ENST00000592017 SLITRK1Q96PX8 696 aa14.74□□□□□ -0.05
CLIP3-205ENST00000592017 HNRNPABQ99729 332 aaKnown RBP14.74□□□□□ -0.05
CLIP3-205ENST00000592017 SMOQ99835 787 aa14.74□□□□□ -0.05
CLIP3-205ENST00000592017 TTLL2Q9BWV7 592 aa14.74□□□□□ -0.05
CLIP3-205ENST00000592017 INTS2Q9H0H0 1204 aaKnown RBP14.74□□□□□ -0.05
CLIP3-205ENST00000592017 SEMA4AQ9H3S1 761 aa14.74□□□□□ -0.05
CLIP3-205ENST00000592017 PRMT8Q9NR22 394 aaPredicted RBP14.74□□□□□ -0.05
CLIP3-205ENST00000592017 RBM12Q9NTZ6 932 aaKnown RBP14.74□□□□□ -0.05
CLIP3-205ENST00000592017 TRPM5Q9NZQ8 1165 aa14.74□□□□□ -0.05
CLIP3-205ENST00000592017 ZNF292O60281 2723 aa14.73□□□□□ -0.05
CLIP3-205ENST00000592017 TRAV19A0A0A6YYK7 116 aa14.73□□□□□ -0.05
CLIP3-205ENST00000592017 PMM2O15305 246 aa14.73□□□□□ -0.05
CLIP3-205ENST00000592017 RTN3O95197 1032 aaPredicted RBP14.73□□□□□ -0.05
CLIP3-205ENST00000592017 LMNAP02545 664 aaKnown RBP14.73□□□□□ -0.05
CLIP3-205ENST00000592017 CKMP06732 381 aa14.73□□□□□ -0.05
CLIP3-205ENST00000592017 TDGF1P13385 188 aa14.73□□□□□ -0.05
CLIP3-205ENST00000592017 ARSAP15289 507 aa14.73□□□□□ -0.05
CLIP3-205ENST00000592017 CD19P15391 556 aa14.73□□□□□ -0.05
CLIP3-205ENST00000592017 YWHAQP27348 245 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 113.2 ms