RNA–Protein interactions for RNA: ENST00000591548.5

TUBD1-211, Transcript of tubulin delta 1, humanhuman

TSL 1 (best)

Gene TUBD1, Length 1,577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-211ENST00000591548 RNF168Q8IYW5 571 aaPredicted RBP11.96□□□□□ -0.49
TUBD1-211ENST00000591548 RASGEF1CQ8N431 466 aa11.96□□□□□ -0.49
TUBD1-211ENST00000591548 ARFGAP1Q8N6T3 406 aa11.96□□□□□ -0.49
TUBD1-211ENST00000591548 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.96□□□□□ -0.49
TUBD1-211ENST00000591548 UBXN6Q9BZV1 441 aa11.96□□□□□ -0.49
TUBD1-211ENST00000591548 CXXC1Q9P0U4 656 aaPredicted RBP11.96□□□□□ -0.49
TUBD1-211ENST00000591548 RNF14Q9UBS8 474 aa11.96□□□□□ -0.49
TUBD1-211ENST00000591548 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.96□□□□□ -0.49
TUBD1-211ENST00000591548 MRPL42Q9Y6G3 142 aaKnown RBP11.96□□□□□ -0.49
TUBD1-211ENST00000591548 V9GYY5 206 aaPredicted RBP11.96□□□□□ -0.49
TUBD1-211ENST00000591548 ZBBXA8MT70 800 aa11.96□□□□□ -0.5
TUBD1-211ENST00000591548 EFCAB8A8MWE9 144 aa11.96□□□□□ -0.5
TUBD1-211ENST00000591548 PYGMP11217 842 aa11.96□□□□□ -0.5
TUBD1-211ENST00000591548 CYP2F1P24903 491 aa11.96□□□□□ -0.5
TUBD1-211ENST00000591548 SCNN1AP37088 669 aa11.96□□□□□ -0.5
TUBD1-211ENST00000591548 TKTL1P51854 596 aa11.96□□□□□ -0.5
TUBD1-211ENST00000591548 ZNF143P52747 638 aaPredicted RBP11.96□□□□□ -0.5
TUBD1-211ENST00000591548 SPOUT1Q5T280 376 aaKnown RBP11.96□□□□□ -0.5
TUBD1-211ENST00000591548 CCDC181Q5TID7 509 aa11.96□□□□□ -0.5
TUBD1-211ENST00000591548 ZNF280DQ6N043 979 aa11.96□□□□□ -0.5
TUBD1-211ENST00000591548 AADACL2Q6P093 401 aa11.96□□□□□ -0.5
TUBD1-211ENST00000591548 C4orf50Q6ZRC1 276 aa11.96□□□□□ -0.5
TUBD1-211ENST00000591548 SLC26A9Q7LBE3 791 aa11.96□□□□□ -0.5
TUBD1-211ENST00000591548 SPATA2LQ8IUW3 424 aaPredicted RBP11.96□□□□□ -0.5
TUBD1-211ENST00000591548 DCP1BQ8IZD4 617 aaKnown RBP11.96□□□□□ -0.5
TUBD1-211ENST00000591548 SLC39A11Q8N1S5 342 aa11.96□□□□□ -0.5
TUBD1-211ENST00000591548 ACTRT1Q8TDG2 376 aa11.96□□□□□ -0.5
TUBD1-211ENST00000591548 RXFP2Q8WXD0 754 aa11.96□□□□□ -0.5
TUBD1-211ENST00000591548 TSC1Q92574 1164 aa11.96□□□□□ -0.5
TUBD1-211ENST00000591548 NDRG1Q92597 394 aaKnown RBP11.96□□□□□ -0.5
TUBD1-211ENST00000591548 ZNF558Q96NG5 402 aa11.96□□□□□ -0.5
TUBD1-211ENST00000591548 YME1L1Q96TA2 773 aa11.96□□□□□ -0.5
TUBD1-211ENST00000591548 TTPALQ9BTX7 342 aa11.96□□□□□ -0.5
TUBD1-211ENST00000591548 LRRC4Q9HBW1 653 aa11.96□□□□□ -0.5
TUBD1-211ENST00000591548 OR6C75A6NL08 312 aa11.95□□□□□ -0.5
TUBD1-211ENST00000591548 LRCH4O75427 683 aa11.95□□□□□ -0.5
TUBD1-211ENST00000591548 GJB5O95377 273 aa11.95□□□□□ -0.5
TUBD1-211ENST00000591548 PDGFRAP16234 1089 aa11.95□□□□□ -0.5
TUBD1-211ENST00000591548 GPD1P21695 349 aa11.95□□□□□ -0.5
TUBD1-211ENST00000591548 PAFAH1B1P43034 410 aa11.95□□□□□ -0.5
TUBD1-211ENST00000591548 RWDD2BP57060 319 aa11.95□□□□□ -0.5
TUBD1-211ENST00000591548 MRPS5P82675 430 aaKnown RBP11.95□□□□□ -0.5
TUBD1-211ENST00000591548 HTRA4P83105 476 aaPredicted RBP11.95□□□□□ -0.5
TUBD1-211ENST00000591548 ERCC6LQ2NKX8 1250 aa11.95□□□□□ -0.5
TUBD1-211ENST00000591548 USP41Q3LFD5 358 aa11.95□□□□□ -0.5
TUBD1-211ENST00000591548 CCDC14Q49A88 953 aa11.95□□□□□ -0.5
TUBD1-211ENST00000591548 SH3PXD2AQ5TCZ1 1133 aa11.95□□□□□ -0.5
TUBD1-211ENST00000591548 PRSS55Q6UWB4 352 aaPredicted RBP11.95□□□□□ -0.5
TUBD1-211ENST00000591548 ANKS3Q6ZW76 656 aa11.95□□□□□ -0.5
TUBD1-211ENST00000591548 ARCQ7LC44 396 aa11.95□□□□□ -0.5
TUBD1-211ENST00000591548 RHOT1Q8IXI2 618 aa11.95□□□□□ -0.5
TUBD1-211ENST00000591548 COLGALT1Q8NBJ5 622 aa11.95□□□□□ -0.5
TUBD1-211ENST00000591548 NOA1Q8NC60 698 aaKnown RBP11.95□□□□□ -0.5
TUBD1-211ENST00000591548 SPATA4Q8NEY3 305 aa11.95□□□□□ -0.5
TUBD1-211ENST00000591548 RNPC3Q96LT9 517 aaKnown RBP11.95□□□□□ -0.5
TUBD1-211ENST00000591548 CNPY3Q9BT09 278 aa11.95□□□□□ -0.5
TUBD1-211ENST00000591548 DMAP1Q9NPF5 467 aaPredicted RBP11.95□□□□□ -0.5
TUBD1-211ENST00000591548 CHST7Q9NS84 486 aa11.95□□□□□ -0.5
TUBD1-211ENST00000591548 TTC7AQ9ULT0 858 aaPredicted RBP11.95□□□□□ -0.5
TUBD1-211ENST00000591548 PTPRDP23468 1912 aa11.95□□□□□ -0.5
TUBD1-211ENST00000591548 LAMA2P24043 3122 aaKnown RBP11.94□□□□□ -0.5
TUBD1-211ENST00000591548 H7C4K7 107 aa11.94□□□□□ -0.5
TUBD1-211ENST00000591548 PGRMC1O00264 195 aaKnown RBP11.94□□□□□ -0.5
TUBD1-211ENST00000591548 DPYSL4O14531 572 aa11.94□□□□□ -0.5
TUBD1-211ENST00000591548 PSTPIP1O43586 416 aa11.94□□□□□ -0.5
TUBD1-211ENST00000591548 LINC00271P0C7V0 271 aa11.94□□□□□ -0.5
TUBD1-211ENST00000591548 LAG3P18627 525 aa11.94□□□□□ -0.5
TUBD1-211ENST00000591548 SSR1P43307 286 aaKnown RBP11.94□□□□□ -0.5
TUBD1-211ENST00000591548 ITIH3Q06033 890 aa11.94□□□□□ -0.5
TUBD1-211ENST00000591548 ACAP1Q15027 740 aa11.94□□□□□ -0.5
TUBD1-211ENST00000591548 NFE2Q16621 373 aaPredicted RBP11.94□□□□□ -0.5
TUBD1-211ENST00000591548 C15orf59Q2T9L4 293 aaPredicted RBP11.94□□□□□ -0.5
TUBD1-211ENST00000591548 ATP13A4Q4VNC1 1196 aa11.94□□□□□ -0.5
TUBD1-211ENST00000591548 RAB6CQ53S08 254 aa11.94□□□□□ -0.5
TUBD1-211ENST00000591548 EFHC1Q5JVL4 640 aa11.94□□□□□ -0.5
TUBD1-211ENST00000591548 LRRC38Q5VT99 294 aa11.94□□□□□ -0.5
TUBD1-211ENST00000591548 TXNRD3NBQ6F5E7 133 aa11.94□□□□□ -0.5
TUBD1-211ENST00000591548 PSRC1Q6PGN9 363 aaPredicted RBP11.94□□□□□ -0.5
TUBD1-211ENST00000591548 SIX6OS1Q8N1H7 587 aa11.94□□□□□ -0.5
TUBD1-211ENST00000591548 FUBP3Q96I24 572 aaKnown RBP eCLIP11.94□□□□□ -0.5
TUBD1-211ENST00000591548 RPGRIP1Q96KN7 1286 aa11.94□□□□□ -0.5
TUBD1-211ENST00000591548 CFAP57Q96MR6 1250 aa11.94□□□□□ -0.5
TUBD1-211ENST00000591548 PGLYRP2Q96PD5 576 aa11.94□□□□□ -0.5
TUBD1-211ENST00000591548 ULBP1Q9BZM6 244 aa11.94□□□□□ -0.5
TUBD1-211ENST00000591548 RAB6CQ9H0N0 254 aa11.94□□□□□ -0.5
TUBD1-211ENST00000591548 ABI2Q9NYB9 513 aaPredicted RBP11.94□□□□□ -0.5
TUBD1-211ENST00000591548 ZMYND8Q9ULU4 1186 aaPredicted RBP11.94□□□□□ -0.5
TUBD1-211ENST00000591548 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.94□□□□□ -0.5
TUBD1-211ENST00000591548 TNFRSF10BO14763 440 aa11.93□□□□□ -0.5
TUBD1-211ENST00000591548 FBXO21O94952 628 aa11.93□□□□□ -0.5
TUBD1-211ENST00000591548 VNN2O95498 520 aa11.93□□□□□ -0.5
TUBD1-211ENST00000591548 FGGP02679 453 aa11.93□□□□□ -0.5
TUBD1-211ENST00000591548 USP17L7P0C7H9 530 aa11.93□□□□□ -0.5
TUBD1-211ENST00000591548 TFE3P19532 575 aaPredicted RBP11.93□□□□□ -0.5
TUBD1-211ENST00000591548 IL1R2P27930 398 aa11.93□□□□□ -0.5
TUBD1-211ENST00000591548 GRIK1P39086 918 aa11.93□□□□□ -0.5
TUBD1-211ENST00000591548 ARPP19P56211 112 aa11.93□□□□□ -0.5
TUBD1-211ENST00000591548 DAOAP59103 153 aa11.93□□□□□ -0.5
TUBD1-211ENST00000591548 YWHAZP63104 245 aaKnown RBP11.93□□□□□ -0.5
TUBD1-211ENST00000591548 SLC25A11Q02978 314 aaKnown RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms