RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 LMBRD2Q68DH5 695 aaPredicted RBP11.11□□□□□ -0.63
VPS4B-207ENST00000591519 HEATR6Q6AI08 1181 aaKnown RBP11.11□□□□□ -0.63
VPS4B-207ENST00000591519 UNC13DQ70J99 1090 aa11.11□□□□□ -0.63
VPS4B-207ENST00000591519 SCN4BQ8IWT1 228 aa11.11□□□□□ -0.63
VPS4B-207ENST00000591519 C12orf56Q8IXR9 622 aa11.11□□□□□ -0.63
VPS4B-207ENST00000591519 FAM160A2Q8N612 972 aaPredicted RBP11.11□□□□□ -0.63
VPS4B-207ENST00000591519 ARL14EPQ8N8R7 260 aaPredicted RBP11.11□□□□□ -0.63
VPS4B-207ENST00000591519 MYCBPAPQ8TBZ2 947 aa11.11□□□□□ -0.63
VPS4B-207ENST00000591519 NETO1Q8TDF5 533 aa11.11□□□□□ -0.63
VPS4B-207ENST00000591519 NOC3LQ8WTT2 800 aaKnown RBP11.11□□□□□ -0.63
VPS4B-207ENST00000591519 TMEM174Q8WUU8 243 aa11.11□□□□□ -0.63
VPS4B-207ENST00000591519 SCFD1Q8WVM8 642 aa11.11□□□□□ -0.63
VPS4B-207ENST00000591519 GAB3Q8WWW8 586 aa11.11□□□□□ -0.63
VPS4B-207ENST00000591519 ATP2A3Q93084 1043 aa11.11□□□□□ -0.63
VPS4B-207ENST00000591519 DHX58Q96C10 678 aa11.11□□□□□ -0.63
VPS4B-207ENST00000591519 ZC3H10Q96K80 434 aaKnown RBP11.11□□□□□ -0.63
VPS4B-207ENST00000591519 P2RY13Q9BPV8 354 aa11.11□□□□□ -0.63
VPS4B-207ENST00000591519 TTLL2Q9BWV7 592 aa11.11□□□□□ -0.63
VPS4B-207ENST00000591519 MAGEF1Q9HAY2 307 aa11.11□□□□□ -0.63
VPS4B-207ENST00000591519 DUS2Q9NX74 493 aaKnown RBP11.11□□□□□ -0.63
VPS4B-207ENST00000591519 EHD2Q9NZN4 543 aa11.11□□□□□ -0.63
VPS4B-207ENST00000591519 CGNQ9P2M7 1197 aaKnown RBP11.11□□□□□ -0.63
VPS4B-207ENST00000591519 ARHGAP26Q9UNA1 814 aa11.11□□□□□ -0.63
VPS4B-207ENST00000591519 RALGAPA1Q6GYQ0 2036 aa11.11□□□□□ -0.63
VPS4B-207ENST00000591519 UBE4BO95155 1302 aa11.1□□□□□ -0.63
VPS4B-207ENST00000591519 NCOR2Q9Y618 2525 aa11.1□□□□□ -0.63
VPS4B-207ENST00000591519 ATG2BQ96BY7 2078 aa11.1□□□□□ -0.63
VPS4B-207ENST00000591519 C2orf78A6NCI8 922 aa11.1□□□□□ -0.63
VPS4B-207ENST00000591519 EGFP01133 1207 aa11.1□□□□□ -0.63
VPS4B-207ENST00000591519 PDGFRBP09619 1106 aa11.1□□□□□ -0.63
VPS4B-207ENST00000591519 BDNFP23560 247 aa11.1□□□□□ -0.63
VPS4B-207ENST00000591519 GRIK1P39086 918 aa11.1□□□□□ -0.63
VPS4B-207ENST00000591519 RAP1GAPP47736 663 aa11.1□□□□□ -0.63
VPS4B-207ENST00000591519 PDE6CP51160 858 aa11.1□□□□□ -0.63
VPS4B-207ENST00000591519 NOP14P78316 857 aaKnown RBP11.1□□□□□ -0.63
VPS4B-207ENST00000591519 ASIC1P78348 528 aa11.1□□□□□ -0.63
VPS4B-207ENST00000591519 PRR20EP86478 221 aa11.1□□□□□ -0.63
VPS4B-207ENST00000591519 PRR20CP86479 221 aa11.1□□□□□ -0.63
VPS4B-207ENST00000591519 PRR20DP86480 221 aa11.1□□□□□ -0.63
VPS4B-207ENST00000591519 PRR20BP86481 221 aa11.1□□□□□ -0.63
VPS4B-207ENST00000591519 PRR20AP86496 221 aa11.1□□□□□ -0.63
VPS4B-207ENST00000591519 ZXDBP98169 803 aa11.1□□□□□ -0.63
VPS4B-207ENST00000591519 CYP24A1Q07973 514 aa11.1□□□□□ -0.63
VPS4B-207ENST00000591519 NR1H3Q13133 447 aa11.1□□□□□ -0.63
VPS4B-207ENST00000591519 BMT2Q1RMZ1 405 aa11.1□□□□□ -0.63
VPS4B-207ENST00000591519 EML3Q32P44 896 aa11.1□□□□□ -0.63
VPS4B-207ENST00000591519 ATL3Q6DD88 541 aa11.1□□□□□ -0.63
VPS4B-207ENST00000591519 PRR23CQ6ZRP0 262 aa11.1□□□□□ -0.63
VPS4B-207ENST00000591519 DENND5BQ6ZUT9 1274 aa11.1□□□□□ -0.63
VPS4B-207ENST00000591519 SYT13Q7L8C5 426 aa11.1□□□□□ -0.63
VPS4B-207ENST00000591519 CACNA2D4Q7Z3S7 1137 aa11.1□□□□□ -0.63
VPS4B-207ENST00000591519 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.1□□□□□ -0.63
VPS4B-207ENST00000591519 CPA6Q8N4T0 437 aa11.1□□□□□ -0.63
VPS4B-207ENST00000591519 XXYLT1Q8NBI6 393 aa11.1□□□□□ -0.63
VPS4B-207ENST00000591519 RDH13Q8NBN7 331 aa11.1□□□□□ -0.63
VPS4B-207ENST00000591519 MYLPFQ96A32 169 aa11.1□□□□□ -0.63
VPS4B-207ENST00000591519 ZNF775Q96BV0 537 aaPredicted RBP11.1□□□□□ -0.63
VPS4B-207ENST00000591519 PCED1BQ96HM7 432 aa11.1□□□□□ -0.63
VPS4B-207ENST00000591519 C8orf48Q96LL4 319 aa11.1□□□□□ -0.63
VPS4B-207ENST00000591519 CGRRF1Q99675 332 aa11.1□□□□□ -0.63
VPS4B-207ENST00000591519 GZF1Q9H116 711 aaPredicted RBP11.1□□□□□ -0.63
VPS4B-207ENST00000591519 LINC00597Q9H2U6 94 aa11.1□□□□□ -0.63
VPS4B-207ENST00000591519 EBF1Q9UH73 591 aa11.1□□□□□ -0.63
VPS4B-207ENST00000591519 SLC8A2Q9UPR5 921 aa11.1□□□□□ -0.63
VPS4B-207ENST00000591519 NME7Q9Y5B8 376 aa11.1□□□□□ -0.63
VPS4B-207ENST00000591519 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.1□□□□□ -0.63
VPS4B-207ENST00000591519 DCDC2BA2VCK2 349 aa11.09□□□□□ -0.63
VPS4B-207ENST00000591519 ZNF840PA6NDX5 716 aa11.09□□□□□ -0.63
VPS4B-207ENST00000591519 TRIM66O15016 1216 aa11.09□□□□□ -0.63
VPS4B-207ENST00000591519 POLR2DO15514 142 aaKnown RBP11.09□□□□□ -0.63
VPS4B-207ENST00000591519 RPP40O75818 363 aaKnown RBP11.09□□□□□ -0.63
VPS4B-207ENST00000591519 OLFM2O95897 454 aa11.09□□□□□ -0.63
VPS4B-207ENST00000591519 CKMP06732 381 aa11.09□□□□□ -0.63
VPS4B-207ENST00000591519 PTPN1P18031 435 aaKnown RBP11.09□□□□□ -0.63
VPS4B-207ENST00000591519 TNNI1P19237 187 aa11.09□□□□□ -0.63
VPS4B-207ENST00000591519 ATICP31939 592 aa11.09□□□□□ -0.63
VPS4B-207ENST00000591519 IFNAR2P48551 515 aa11.09□□□□□ -0.63
VPS4B-207ENST00000591519 USP46P62068 366 aa11.09□□□□□ -0.63
VPS4B-207ENST00000591519 PSMC1P62191 440 aaKnown RBP11.09□□□□□ -0.63
VPS4B-207ENST00000591519 CLDN10P78369 228 aa11.09□□□□□ -0.63
VPS4B-207ENST00000591519 SLC7A9P82251 487 aa11.09□□□□□ -0.63
VPS4B-207ENST00000591519 WDR72Q3MJ13 1102 aa11.09□□□□□ -0.63
VPS4B-207ENST00000591519 CEP68Q76N32 757 aa11.09□□□□□ -0.63
VPS4B-207ENST00000591519 HS2ST1Q7LGA3 356 aa11.09□□□□□ -0.63
VPS4B-207ENST00000591519 ADGRG2Q8IZP9 1017 aa11.09□□□□□ -0.63
VPS4B-207ENST00000591519 CCDC26Q8TAB7 109 aa11.09□□□□□ -0.63
VPS4B-207ENST00000591519 SH3RF2Q8TEC5 729 aa11.09□□□□□ -0.63
VPS4B-207ENST00000591519 EZH1Q92800 747 aaPredicted RBP11.09□□□□□ -0.63
VPS4B-207ENST00000591519 CD101Q93033 1021 aa11.09□□□□□ -0.63
VPS4B-207ENST00000591519 CCDC127Q96BQ5 260 aa11.09□□□□□ -0.63
VPS4B-207ENST00000591519 SPATA32Q96LK8 384 aa11.09□□□□□ -0.63
VPS4B-207ENST00000591519 FNBP1Q96RU3 617 aa11.09□□□□□ -0.63
VPS4B-207ENST00000591519 MMS19Q96T76 1030 aa11.09□□□□□ -0.63
VPS4B-207ENST00000591519 MRPL45Q9BRJ2 306 aaKnown RBP11.09□□□□□ -0.63
VPS4B-207ENST00000591519 RNF38Q9H0F5 515 aa11.09□□□□□ -0.63
VPS4B-207ENST00000591519 XYLT2Q9H1B5 865 aa11.09□□□□□ -0.63
VPS4B-207ENST00000591519 SNX25Q9H3E2 840 aa11.09□□□□□ -0.63
VPS4B-207ENST00000591519 VRTNQ9H8Y1 702 aa11.09□□□□□ -0.63
VPS4B-207ENST00000591519 GDPD2Q9HCC8 539 aa11.09□□□□□ -0.63
VPS4B-207ENST00000591519 TRPC7Q9HCX4 862 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms