RNA–Protein interactions for RNA: ENST00000591055.5

CIRBP-230, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 928 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-230ENST00000591055 CPQQ9Y646 472 aa16.77■□□□□ 0.28
CIRBP-230ENST00000591055 KIAA1549LQ6ZVL6 1849 aa16.77■□□□□ 0.27
CIRBP-230ENST00000591055 CEP295Q9C0D2 2601 aa16.77■□□□□ 0.27
CIRBP-230ENST00000591055 A8MXQ7 604 aa16.76■□□□□ 0.27
CIRBP-230ENST00000591055 SLC9A3R1O14745 358 aaPredicted RBP16.76■□□□□ 0.27
CIRBP-230ENST00000591055 DCLK1O15075 740 aa16.76■□□□□ 0.27
CIRBP-230ENST00000591055 POLR2DO15514 142 aaKnown RBP16.76■□□□□ 0.27
CIRBP-230ENST00000591055 MYL6P60660 151 aa16.76■□□□□ 0.27
CIRBP-230ENST00000591055 EHHADHQ08426 723 aa16.76■□□□□ 0.27
CIRBP-230ENST00000591055 IFRD2Q12894 506 aaPredicted RBP16.76■□□□□ 0.27
CIRBP-230ENST00000591055 C2orf27AQ580R0 203 aa16.76■□□□□ 0.27
CIRBP-230ENST00000591055 FOXD4L5Q5VV16 416 aaPredicted RBP16.76■□□□□ 0.27
CIRBP-230ENST00000591055 FOXD4L4Q8WXT5 416 aaPredicted RBP16.76■□□□□ 0.27
CIRBP-230ENST00000591055 ZNF516Q92618 1163 aa16.76■□□□□ 0.27
CIRBP-230ENST00000591055 SYAP1Q96A49 352 aaPredicted RBP16.76■□□□□ 0.27
CIRBP-230ENST00000591055 ZNF518BQ9C0D4 1074 aa16.76■□□□□ 0.27
CIRBP-230ENST00000591055 BLZF1Q9H2G9 400 aa16.76■□□□□ 0.27
CIRBP-230ENST00000591055 SMPD4Q9NXE4 827 aa16.76■□□□□ 0.27
CIRBP-230ENST00000591055 CGNQ9P2M7 1197 aaKnown RBP16.76■□□□□ 0.27
CIRBP-230ENST00000591055 NXF1Q9UBU9 619 aaKnown RBP16.76■□□□□ 0.27
CIRBP-230ENST00000591055 MYOFQ9NZM1 2061 aa16.75■□□□□ 0.27
CIRBP-230ENST00000591055 K7EQS6 105 aa16.75■□□□□ 0.27
CIRBP-230ENST00000591055 CLDN5O00501 218 aa16.75■□□□□ 0.27
CIRBP-230ENST00000591055 EXOC3O60645 756 aa16.75■□□□□ 0.27
CIRBP-230ENST00000591055 PHACTR2O75167 634 aa16.75■□□□□ 0.27
CIRBP-230ENST00000591055 STAU1O95793 577 aaKnown RBP16.75■□□□□ 0.27
CIRBP-230ENST00000591055 OLFM2O95897 454 aa16.75■□□□□ 0.27
CIRBP-230ENST00000591055 OAS1P00973 400 aaKnown RBP16.75■□□□□ 0.27
CIRBP-230ENST00000591055 CYP17A1P05093 508 aa16.75■□□□□ 0.27
CIRBP-230ENST00000591055 MBL2P11226 248 aaPredicted RBP16.75■□□□□ 0.27
CIRBP-230ENST00000591055 CASP1P29466 404 aa16.75■□□□□ 0.27
CIRBP-230ENST00000591055 ATICP31939 592 aa16.75■□□□□ 0.27
CIRBP-230ENST00000591055 GBP1P32455 592 aa16.75■□□□□ 0.27
CIRBP-230ENST00000591055 CACNA2D1P54289 1103 aa16.75■□□□□ 0.27
CIRBP-230ENST00000591055 CREB5Q02930 508 aa16.75■□□□□ 0.27
CIRBP-230ENST00000591055 BMT2Q1RMZ1 405 aa16.75■□□□□ 0.27
CIRBP-230ENST00000591055 GAB4Q2WGN9 574 aa16.75■□□□□ 0.27
CIRBP-230ENST00000591055 USP39Q53GS9 565 aaKnown RBP16.75■□□□□ 0.27
CIRBP-230ENST00000591055 C12orf56Q8IXR9 622 aa16.75■□□□□ 0.27
CIRBP-230ENST00000591055 ADGRG2Q8IZP9 1017 aa16.75■□□□□ 0.27
CIRBP-230ENST00000591055 B3GALNT2Q8NCR0 500 aa16.75■□□□□ 0.27
CIRBP-230ENST00000591055 B3GNT5Q9BYG0 378 aa16.75■□□□□ 0.27
CIRBP-230ENST00000591055 SLC39A2Q9NP94 309 aa16.75■□□□□ 0.27
CIRBP-230ENST00000591055 TMEM30AQ9NV96 361 aa16.75■□□□□ 0.27
CIRBP-230ENST00000591055 CFAP97Q9P2B7 532 aa16.75■□□□□ 0.27
CIRBP-230ENST00000591055 INVSQ9Y283 1065 aa16.75■□□□□ 0.27
CIRBP-230ENST00000591055 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.74■□□□□ 0.27
CIRBP-230ENST00000591055 PVALEFA0A1B0GWK0 134 aa16.74■□□□□ 0.27
CIRBP-230ENST00000591055 SCAMP3O14828 347 aaKnown RBP16.74■□□□□ 0.27
CIRBP-230ENST00000591055 TM4SF5O14894 197 aa16.74■□□□□ 0.27
CIRBP-230ENST00000591055 CLSTN1O94985 981 aa16.74■□□□□ 0.27
CIRBP-230ENST00000591055 RTN3O95197 1032 aaPredicted RBP16.74■□□□□ 0.27
CIRBP-230ENST00000591055 YWHAQP27348 245 aa16.74■□□□□ 0.27
CIRBP-230ENST00000591055 DHCR24Q15392 516 aa16.74■□□□□ 0.27
CIRBP-230ENST00000591055 FOXD4L6Q3SYB3 417 aaPredicted RBP16.74■□□□□ 0.27
CIRBP-230ENST00000591055 RNF43Q68DV7 783 aa16.74■□□□□ 0.27
CIRBP-230ENST00000591055 TCEAL6Q6IPX3 200 aa16.74■□□□□ 0.27
CIRBP-230ENST00000591055 FOXD4L3Q6VB84 417 aaPredicted RBP16.74■□□□□ 0.27
CIRBP-230ENST00000591055 C11orf74Q86VG3 221 aa16.74■□□□□ 0.27
CIRBP-230ENST00000591055 DDX42Q86XP3 938 aaKnown RBP eCLIP16.74■□□□□ 0.272e-6■■■□□ 17.9
CIRBP-230ENST00000591055 NUP93Q8N1F7 819 aa16.74■□□□□ 0.27
CIRBP-230ENST00000591055 CCDC33Q8N5R6 958 aa16.74■□□□□ 0.27
CIRBP-230ENST00000591055 TCEAL3Q969E4 200 aa16.74■□□□□ 0.27
CIRBP-230ENST00000591055 BACH2Q9BYV9 841 aa16.74■□□□□ 0.27
CIRBP-230ENST00000591055 TPSD1Q9BZJ3 242 aa16.74■□□□□ 0.27
CIRBP-230ENST00000591055 GZF1Q9H116 711 aaPredicted RBP16.74■□□□□ 0.27
CIRBP-230ENST00000591055 XYLT2Q9H1B5 865 aa16.74■□□□□ 0.27
CIRBP-230ENST00000591055 FAM13BQ9NYF5 915 aa16.74■□□□□ 0.27
CIRBP-230ENST00000591055 MMP17Q9ULZ9 603 aa16.74■□□□□ 0.27
CIRBP-230ENST00000591055 ATP8B3O60423 1300 aa16.73■□□□□ 0.27
CIRBP-230ENST00000591055 BCLAF3A2AJT9 711 aaKnown RBP16.73■□□□□ 0.27
CIRBP-230ENST00000591055 ANTXRLA6NF34 631 aa16.73■□□□□ 0.27
CIRBP-230ENST00000591055 CAVIN2O95810 425 aa16.73■□□□□ 0.27
CIRBP-230ENST00000591055 AFMP43652 599 aa16.73■□□□□ 0.27
CIRBP-230ENST00000591055 SLC6A11P48066 632 aa16.73■□□□□ 0.27
CIRBP-230ENST00000591055 CASP4P49662 377 aa16.73■□□□□ 0.27
CIRBP-230ENST00000591055 MRPS21P82921 87 aaKnown RBP16.73■□□□□ 0.27
CIRBP-230ENST00000591055 BIRC3Q13489 604 aa16.73■□□□□ 0.27
CIRBP-230ENST00000591055 KNOP1Q1ED39 458 aaKnown RBP16.73■□□□□ 0.27
CIRBP-230ENST00000591055 ZNF699Q32M78 642 aa16.73■□□□□ 0.27
CIRBP-230ENST00000591055 N4BP2L1Q5TBK1 243 aaPredicted RBP16.73■□□□□ 0.27
CIRBP-230ENST00000591055 ANO7Q6IWH7 933 aa16.73■□□□□ 0.27
CIRBP-230ENST00000591055 PDZD8Q8NEN9 1154 aa16.73■□□□□ 0.27
CIRBP-230ENST00000591055 GOLGA5Q8TBA6 731 aa16.73■□□□□ 0.27
CIRBP-230ENST00000591055 OVCA2Q8WZ82 227 aa16.73■□□□□ 0.27
CIRBP-230ENST00000591055 FBXO32Q969P5 355 aa16.73■□□□□ 0.27
CIRBP-230ENST00000591055 CHAMP1Q96JM3 812 aa16.73■□□□□ 0.27
CIRBP-230ENST00000591055 PNKPQ96T60 521 aa16.73■□□□□ 0.27
CIRBP-230ENST00000591055 MED10Q9BTT4 135 aa16.73■□□□□ 0.27
CIRBP-230ENST00000591055 SMYD3Q9H7B4 428 aa16.73■□□□□ 0.27
CIRBP-230ENST00000591055 THADAQ6YHU6 1953 aa16.73■□□□□ 0.27
CIRBP-230ENST00000591055 USP24Q9UPU5 2620 aa16.72■□□□□ 0.27
CIRBP-230ENST00000591055 NUP205Q92621 2012 aa16.72■□□□□ 0.27
CIRBP-230ENST00000591055 GON4LQ3T8J9 2241 aa16.72■□□□□ 0.27
CIRBP-230ENST00000591055 KRT37O76014 449 aa16.72■□□□□ 0.27
CIRBP-230ENST00000591055 ADH1CP00326 375 aa16.72■□□□□ 0.27
CIRBP-230ENST00000591055 APODP05090 189 aa16.72■□□□□ 0.27
CIRBP-230ENST00000591055 EIF2DP41214 584 aaKnown RBP16.72■□□□□ 0.27
CIRBP-230ENST00000591055 ME1P48163 572 aa16.72■□□□□ 0.27
CIRBP-230ENST00000591055 AP3M2P53677 418 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms