RNA–Protein interactions for RNA: ENST00000589990.1

PRKCSH-210, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-210ENST00000589990 AP5Z1O43299 807 aa13.68□□□□□ -0.22
PRKCSH-210ENST00000589990 APODP05090 189 aa13.68□□□□□ -0.22
PRKCSH-210ENST00000589990 MAOBP27338 520 aa13.68□□□□□ -0.22
PRKCSH-210ENST00000589990 ADSSP30520 456 aa13.68□□□□□ -0.22
PRKCSH-210ENST00000589990 RDXP35241 583 aaKnown RBP13.68□□□□□ -0.22
PRKCSH-210ENST00000589990 HOXD12P35452 270 aa13.68□□□□□ -0.22
PRKCSH-210ENST00000589990 PRPHP41219 470 aa13.68□□□□□ -0.22
PRKCSH-210ENST00000589990 PSMC1P62191 440 aaKnown RBP13.68□□□□□ -0.22
PRKCSH-210ENST00000589990 RESTQ13127 1097 aa13.68□□□□□ -0.22
PRKCSH-210ENST00000589990 CFAP221Q4G0U5 840 aa13.68□□□□□ -0.22
PRKCSH-210ENST00000589990 SPDYCQ5MJ68 293 aa13.68□□□□□ -0.22
PRKCSH-210ENST00000589990 EOGTQ5NDL2 527 aa13.68□□□□□ -0.22
PRKCSH-210ENST00000589990 SPATA2LQ8IUW3 424 aaPredicted RBP13.68□□□□□ -0.22
PRKCSH-210ENST00000589990 NAXDQ8IW45 347 aa13.68□□□□□ -0.22
PRKCSH-210ENST00000589990 NAT16Q8N8M0 369 aa13.68□□□□□ -0.22
PRKCSH-210ENST00000589990 C1orf127Q8N9H9 656 aa13.68□□□□□ -0.22
PRKCSH-210ENST00000589990 TRIML1Q8N9V2 468 aa13.68□□□□□ -0.22
PRKCSH-210ENST00000589990 CEP76Q8TAP6 659 aa13.68□□□□□ -0.22
PRKCSH-210ENST00000589990 HSPA12BQ96MM6 686 aa13.68□□□□□ -0.22
PRKCSH-210ENST00000589990 KCND2Q9NZV8 630 aa13.68□□□□□ -0.22
PRKCSH-210ENST00000589990 CFAP97Q9P2B7 532 aa13.68□□□□□ -0.22
PRKCSH-210ENST00000589990 AGO2Q9UKV8 859 aaKnown RBP13.68□□□□□ -0.22
PRKCSH-210ENST00000589990 VWA3AA6NCI4 1184 aa13.67□□□□□ -0.22
PRKCSH-210ENST00000589990 TRAK2O60296 914 aa13.67□□□□□ -0.22
PRKCSH-210ENST00000589990 FAM13AO94988 1023 aa13.67□□□□□ -0.22
PRKCSH-210ENST00000589990 PLCG1P19174 1290 aa13.67□□□□□ -0.22
PRKCSH-210ENST00000589990 LMO2P25791 158 aa13.67□□□□□ -0.22
PRKCSH-210ENST00000589990 GRIA2P42262 883 aa13.67□□□□□ -0.22
PRKCSH-210ENST00000589990 TFAMQ00059 246 aaKnown RBP13.67□□□□□ -0.22
PRKCSH-210ENST00000589990 GTF2BQ00403 316 aa13.67□□□□□ -0.22
PRKCSH-210ENST00000589990 LY6G5CQ5SRR4 150 aa13.67□□□□□ -0.22
PRKCSH-210ENST00000589990 LMBRD2Q68DH5 695 aaPredicted RBP13.67□□□□□ -0.22
PRKCSH-210ENST00000589990 FSIP1Q8NA03 581 aa13.67□□□□□ -0.22
PRKCSH-210ENST00000589990 WBP2Q969T9 261 aa13.67□□□□□ -0.22
PRKCSH-210ENST00000589990 MYLPFQ96A32 169 aa13.67□□□□□ -0.22
PRKCSH-210ENST00000589990 ZNF560Q96MR9 790 aa13.67□□□□□ -0.22
PRKCSH-210ENST00000589990 ACOX2Q99424 681 aa13.67□□□□□ -0.22
PRKCSH-210ENST00000589990 ZHX3Q9H4I2 956 aa13.67□□□□□ -0.22
PRKCSH-210ENST00000589990 PARVGQ9HBI0 331 aa13.67□□□□□ -0.22
PRKCSH-210ENST00000589990 CD248Q9HCU0 757 aa13.67□□□□□ -0.22
PRKCSH-210ENST00000589990 CRTAC1Q9NQ79 661 aa13.67□□□□□ -0.22
PRKCSH-210ENST00000589990 BLOC1S4Q9NUP1 217 aa13.67□□□□□ -0.22
PRKCSH-210ENST00000589990 TMEM30AQ9NV96 361 aa13.67□□□□□ -0.22
PRKCSH-210ENST00000589990 ODF2LQ9ULJ1 636 aa13.67□□□□□ -0.22
PRKCSH-210ENST00000589990 CYP8B1Q9UNU6 501 aa13.67□□□□□ -0.22
PRKCSH-210ENST00000589990 SNX9Q9Y5X1 595 aa13.67□□□□□ -0.22
PRKCSH-210ENST00000589990 STYXL1Q9Y6J8 313 aa13.67□□□□□ -0.22
PRKCSH-210ENST00000589990 A0A1W2PQF6 199 aa13.66□□□□□ -0.22
PRKCSH-210ENST00000589990 ZNF840PA6NDX5 716 aa13.66□□□□□ -0.22
PRKCSH-210ENST00000589990 GABRDO14764 452 aa13.66□□□□□ -0.22
PRKCSH-210ENST00000589990 HUS1O60921 280 aa13.66□□□□□ -0.22
PRKCSH-210ENST00000589990 CBFA2T3O75081 653 aa13.66□□□□□ -0.22
PRKCSH-210ENST00000589990 OLFM2O95897 454 aa13.66□□□□□ -0.22
PRKCSH-210ENST00000589990 ADH5P11766 374 aa13.66□□□□□ -0.22
PRKCSH-210ENST00000589990 NDUFV2P19404 249 aa13.66□□□□□ -0.22
PRKCSH-210ENST00000589990 BDNFP23560 247 aa13.66□□□□□ -0.22
PRKCSH-210ENST00000589990 CACNA2D1P54289 1103 aa13.66□□□□□ -0.22
PRKCSH-210ENST00000589990 SLC7A9P82251 487 aa13.66□□□□□ -0.22
PRKCSH-210ENST00000589990 MYL7Q01449 175 aa13.66□□□□□ -0.22
PRKCSH-210ENST00000589990 KCNA1Q09470 495 aa13.66□□□□□ -0.22
PRKCSH-210ENST00000589990 MCM6Q14566 821 aa13.66□□□□□ -0.22
PRKCSH-210ENST00000589990 SOWAHAQ2M3V2 549 aa13.66□□□□□ -0.22
PRKCSH-210ENST00000589990 FAM171BQ6P995 826 aa13.66□□□□□ -0.22
PRKCSH-210ENST00000589990 ADGRF2Q8IZF7 708 aa13.66□□□□□ -0.22
PRKCSH-210ENST00000589990 ZNF513Q8N8E2 541 aaPredicted RBP13.66□□□□□ -0.22
PRKCSH-210ENST00000589990 SPRYD3Q8NCJ5 442 aa13.66□□□□□ -0.22
PRKCSH-210ENST00000589990 IL21RQ9HBE5 538 aa13.66□□□□□ -0.22
PRKCSH-210ENST00000589990 TRPM5Q9NZQ8 1165 aa13.66□□□□□ -0.22
PRKCSH-210ENST00000589990 SIX4Q9UIU6 781 aa13.66□□□□□ -0.22
PRKCSH-210ENST00000589990 NME7Q9Y5B8 376 aa13.66□□□□□ -0.22
PRKCSH-210ENST00000589990 PCDHB9Q9Y5E1 797 aa13.66□□□□□ -0.22
PRKCSH-210ENST00000589990 ZNF462Q96JM2 2506 aa13.65□□□□□ -0.22
PRKCSH-210ENST00000589990 LAD1O00515 517 aa13.65□□□□□ -0.22
PRKCSH-210ENST00000589990 C1QL1O75973 258 aa13.65□□□□□ -0.22
PRKCSH-210ENST00000589990 ABL1P00519 1130 aa13.65□□□□□ -0.22
PRKCSH-210ENST00000589990 EIF2DP41214 584 aaKnown RBP13.65□□□□□ -0.22
PRKCSH-210ENST00000589990 DPP6P42658 865 aa13.65□□□□□ -0.22
PRKCSH-210ENST00000589990 MAGEA11P43364 429 aa13.65□□□□□ -0.22
PRKCSH-210ENST00000589990 TNFRSF4P43489 277 aa13.65□□□□□ -0.22
PRKCSH-210ENST00000589990 GRIK2Q13002 908 aa13.65□□□□□ -0.22
PRKCSH-210ENST00000589990 BYSLQ13895 437 aaKnown RBP13.65□□□□□ -0.22
PRKCSH-210ENST00000589990 PLEKHG6Q3KR16 790 aa13.65□□□□□ -0.22
PRKCSH-210ENST00000589990 HSF5Q4G112 596 aaPredicted RBP13.65□□□□□ -0.22
PRKCSH-210ENST00000589990 EGFLAMQ63HQ2 1017 aa13.65□□□□□ -0.22
PRKCSH-210ENST00000589990 DENND5BQ6ZUT9 1274 aa13.65□□□□□ -0.22
PRKCSH-210ENST00000589990 TOGARAM2Q6ZUX3 1019 aa13.65□□□□□ -0.22
PRKCSH-210ENST00000589990 ETFBKMTQ8IXQ9 262 aa13.65□□□□□ -0.22
PRKCSH-210ENST00000589990 KBTBD7Q8WVZ9 684 aa13.65□□□□□ -0.22
PRKCSH-210ENST00000589990 SAAL1Q96ER3 474 aa13.65□□□□□ -0.22
PRKCSH-210ENST00000589990 FUBP3Q96I24 572 aaKnown RBP eCLIP13.65□□□□□ -0.22
PRKCSH-210ENST00000589990 CDK5RAP3Q96JB5 506 aa13.65□□□□□ -0.22
PRKCSH-210ENST00000589990 ZFRQ96KR1 1074 aaKnown RBP13.65□□□□□ -0.22
PRKCSH-210ENST00000589990 TRIM9Q9C026 710 aa13.65□□□□□ -0.22
PRKCSH-210ENST00000589990 TOR4AQ9NXH8 423 aa13.65□□□□□ -0.22
PRKCSH-210ENST00000589990 CACNA2D2Q9NY47 1150 aa13.65□□□□□ -0.22
PRKCSH-210ENST00000589990 RAD54BQ9Y620 910 aa13.65□□□□□ -0.22
PRKCSH-210ENST00000589990 GOLGA4Q13439 2230 aaKnown RBP13.65□□□□□ -0.22
PRKCSH-210ENST00000589990 A0A1W2PQD8 194 aa13.64□□□□□ -0.23
PRKCSH-210ENST00000589990 TBC1D3BA6NDS4 549 aa13.64□□□□□ -0.23
PRKCSH-210ENST00000589990 TULP3O75386 442 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms