RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 CCDC26Q8TAB7 109 aa19.65■□□□□ 0.74
CCDC43-204ENST00000588687 ZFRQ96KR1 1074 aaKnown RBP19.65■□□□□ 0.74
CCDC43-204ENST00000588687 TRIM9Q9C026 710 aa19.65■□□□□ 0.74
CCDC43-204ENST00000588687 DPEP3Q9H4B8 488 aa19.65■□□□□ 0.74
CCDC43-204ENST00000588687 MTMR6Q9Y217 621 aa19.65■□□□□ 0.74
CCDC43-204ENST00000588687 CPQQ9Y646 472 aa19.65■□□□□ 0.74
CCDC43-204ENST00000588687 ZFYVE26Q68DK2 2539 aa19.65■□□□□ 0.74
CCDC43-204ENST00000588687 ASCC3Q8N3C0 2202 aaKnown RBP19.64■□□□□ 0.74
CCDC43-204ENST00000588687 C4orf47A7E2U8 309 aa19.64■□□□□ 0.73
CCDC43-204ENST00000588687 PATE3B3GLJ2 98 aa19.64■□□□□ 0.73
CCDC43-204ENST00000588687 CDX4O14627 284 aaPredicted RBP19.64■□□□□ 0.73
CCDC43-204ENST00000588687 SCAMP3O14828 347 aaKnown RBP19.64■□□□□ 0.73
CCDC43-204ENST00000588687 EIF3DO15371 548 aaKnown RBP eCLIP19.64■□□□□ 0.73
CCDC43-204ENST00000588687 CST3P01034 146 aaPredicted RBP19.64■□□□□ 0.73
CCDC43-204ENST00000588687 GBP1P32455 592 aa19.64■□□□□ 0.73
CCDC43-204ENST00000588687 EIF2DP41214 584 aaKnown RBP19.64■□□□□ 0.73
CCDC43-204ENST00000588687 EHHADHQ08426 723 aa19.64■□□□□ 0.73
CCDC43-204ENST00000588687 DHCR24Q15392 516 aa19.64■□□□□ 0.73
CCDC43-204ENST00000588687 SNRNP35Q16560 246 aaKnown RBP19.64■□□□□ 0.73
CCDC43-204ENST00000588687 C11orf74Q86VG3 221 aa19.64■□□□□ 0.73
CCDC43-204ENST00000588687 IL17RCQ8NAC3 791 aa19.64■□□□□ 0.73
CCDC43-204ENST00000588687 ZNF518BQ9C0D4 1074 aa19.64■□□□□ 0.73
CCDC43-204ENST00000588687 UPF2Q9HAU5 1272 aaKnown RBP19.64■□□□□ 0.73
CCDC43-204ENST00000588687 AGPAT3Q9NRZ7 376 aa19.64■□□□□ 0.73
CCDC43-204ENST00000588687 SMPD4Q9NXE4 827 aa19.64■□□□□ 0.73
CCDC43-204ENST00000588687 ANXA13P27216 316 aa19.63■□□□□ 0.73
CCDC43-204ENST00000588687 KIR2DL1P43626 348 aaPredicted RBP19.63■□□□□ 0.73
CCDC43-204ENST00000588687 SLC6A11P48066 632 aa19.63■□□□□ 0.73
CCDC43-204ENST00000588687 PPP3CCP48454 512 aa19.63■□□□□ 0.73
CCDC43-204ENST00000588687 TAF10Q12962 218 aa19.63■□□□□ 0.73
CCDC43-204ENST00000588687 USP39Q53GS9 565 aaKnown RBP19.63■□□□□ 0.73
CCDC43-204ENST00000588687 CNNM4Q6P4Q7 775 aa19.63■□□□□ 0.73
CCDC43-204ENST00000588687 RHBDF2Q6PJF5 856 aa19.63■□□□□ 0.73
CCDC43-204ENST00000588687 CCDC33Q8N5R6 958 aa19.63■□□□□ 0.73
CCDC43-204ENST00000588687 MMS19Q96T76 1030 aa19.63■□□□□ 0.73
CCDC43-204ENST00000588687 CGRRF1Q99675 332 aa19.63■□□□□ 0.73
CCDC43-204ENST00000588687 TMEM121BQ9BXQ6 578 aaPredicted RBP19.63■□□□□ 0.73
CCDC43-204ENST00000588687 XYLT2Q9H1B5 865 aa19.63■□□□□ 0.73
CCDC43-204ENST00000588687 A0A0A0MRY4 1105 aa19.62■□□□□ 0.73
CCDC43-204ENST00000588687 SGK1O00141 431 aa19.62■□□□□ 0.73
CCDC43-204ENST00000588687 STAU1O95793 577 aaKnown RBP19.62■□□□□ 0.73
CCDC43-204ENST00000588687 P2RY2P41231 377 aa19.62■□□□□ 0.73
CCDC43-204ENST00000588687 NOVA1P51513 510 aaKnown RBP19.62■□□□□ 0.73
CCDC43-204ENST00000588687 MRPS21P82921 87 aaKnown RBP19.62■□□□□ 0.73
CCDC43-204ENST00000588687 PSMD6Q15008 389 aa19.62■□□□□ 0.73
CCDC43-204ENST00000588687 ALLCQ8N6M5 410 aa19.62■□□□□ 0.73
CCDC43-204ENST00000588687 ZNF507Q8TCN5 953 aa19.62■□□□□ 0.73
CCDC43-204ENST00000588687 ZNF516Q92618 1163 aa19.62■□□□□ 0.73
CCDC43-204ENST00000588687 FNBP1Q96RU3 617 aa19.62■□□□□ 0.73
CCDC43-204ENST00000588687 ELOVL4Q9GZR5 314 aa19.62■□□□□ 0.73
CCDC43-204ENST00000588687 KIAA1586Q9HCI6 787 aa19.62■□□□□ 0.73
CCDC43-204ENST00000588687 EHD2Q9NZN4 543 aa19.62■□□□□ 0.73
CCDC43-204ENST00000588687 CFAP97Q9P2B7 532 aa19.62■□□□□ 0.73
CCDC43-204ENST00000588687 MYO18AQ92614 2054 aaKnown RBP19.62■□□□□ 0.73
CCDC43-204ENST00000588687 PKD1L2Q7Z442 2459 aa19.62■□□□□ 0.73
CCDC43-204ENST00000588687 LAMA5O15230 3695 aa19.62■□□□□ 0.73
CCDC43-204ENST00000588687 CACNA1EQ15878 2313 aa19.61■□□□□ 0.73
CCDC43-204ENST00000588687 ADAM23O75077 832 aa19.61■□□□□ 0.73
CCDC43-204ENST00000588687 KAT7O95251 611 aa19.61■□□□□ 0.73
CCDC43-204ENST00000588687 FAM163BP0C2L3 166 aa19.61■□□□□ 0.73
CCDC43-204ENST00000588687 DLATP10515 647 aaKnown RBP19.61■□□□□ 0.73
CCDC43-204ENST00000588687 PTPN1P18031 435 aaKnown RBP19.61■□□□□ 0.73
CCDC43-204ENST00000588687 CYP24A1Q07973 514 aa19.61■□□□□ 0.73
CCDC43-204ENST00000588687 STXBP4Q6ZWJ1 553 aa19.61■□□□□ 0.73
CCDC43-204ENST00000588687 CYP2U1Q7Z449 544 aa19.61■□□□□ 0.73
CCDC43-204ENST00000588687 ETFBKMTQ8IXQ9 262 aa19.61■□□□□ 0.73
CCDC43-204ENST00000588687 TXNDC5Q8NBS9 432 aaKnown RBP19.61■□□□□ 0.73
CCDC43-204ENST00000588687 LINC00301Q8NCQ3 95 aa19.61■□□□□ 0.73
CCDC43-204ENST00000588687 B3GNT5Q9BYG0 378 aa19.61■□□□□ 0.73
CCDC43-204ENST00000588687 EVLQ9UI08 416 aaPredicted RBP19.61■□□□□ 0.73
CCDC43-204ENST00000588687 PCDH15Q96QU1 1955 aa19.61■□□□□ 0.73
CCDC43-204ENST00000588687 PI4KAP42356 2102 aa19.6■□□□□ 0.73
CCDC43-204ENST00000588687 UBE4BO95155 1302 aa19.6■□□□□ 0.73
CCDC43-204ENST00000588687 CLDN5O00501 218 aa19.6■□□□□ 0.73
CCDC43-204ENST00000588687 PROS1P07225 676 aa19.6■□□□□ 0.73
CCDC43-204ENST00000588687 GNL1P36915 607 aaPredicted RBP19.6■□□□□ 0.73
CCDC43-204ENST00000588687 ZNF252P-AS1Q0IIN9 211 aa19.6■□□□□ 0.73
CCDC43-204ENST00000588687 HSF5Q4G112 596 aaPredicted RBP19.6■□□□□ 0.73
CCDC43-204ENST00000588687 FAM26FQ5R3K3 315 aa19.6■□□□□ 0.73
CCDC43-204ENST00000588687 SH3PXD2AQ5TCZ1 1133 aa19.6■□□□□ 0.73
CCDC43-204ENST00000588687 EMC10Q5UCC4 262 aa19.6■□□□□ 0.73
CCDC43-204ENST00000588687 FRMD1Q8N878 549 aa19.6■□□□□ 0.73
CCDC43-204ENST00000588687 B3GALNT2Q8NCR0 500 aa19.6■□□□□ 0.73
CCDC43-204ENST00000588687 SCFD1Q8WVM8 642 aa19.6■□□□□ 0.73
CCDC43-204ENST00000588687 PNKPQ96T60 521 aa19.6■□□□□ 0.73
CCDC43-204ENST00000588687 DUSP9Q99956 384 aaKnown RBP19.6■□□□□ 0.73
CCDC43-204ENST00000588687 SNX25Q9H3E2 840 aa19.6■□□□□ 0.73
CCDC43-204ENST00000588687 TMEM9BQ9NQ34 198 aa19.6■□□□□ 0.73
CCDC43-204ENST00000588687 MBD1Q9UIS9 605 aaPredicted RBP19.6■□□□□ 0.73
CCDC43-204ENST00000588687 R3HCC1Q9Y3T6 440 aaKnown RBP19.6■□□□□ 0.73
CCDC43-204ENST00000588687 DSPP15924 2871 aaKnown RBP19.6■□□□□ 0.73
CCDC43-204ENST00000588687 GON4LQ3T8J9 2241 aa19.59■□□□□ 0.73
CCDC43-204ENST00000588687 C1QTNF9BB2RNN3 333 aa19.59■□□□□ 0.73
CCDC43-204ENST00000588687 SLC9A3R1O14745 358 aaPredicted RBP19.59■□□□□ 0.73
CCDC43-204ENST00000588687 TNFRSF10BO14763 440 aa19.59■□□□□ 0.73
CCDC43-204ENST00000588687 KHNYNO15037 678 aaKnown RBP19.59■□□□□ 0.73
CCDC43-204ENST00000588687 COCHO43405 550 aa19.59■□□□□ 0.73
CCDC43-204ENST00000588687 KLF8O95600 359 aaPredicted RBP19.59■□□□□ 0.73
CCDC43-204ENST00000588687 C1QTNF9P0C862 333 aa19.59■□□□□ 0.73
CCDC43-204ENST00000588687 ADH5P11766 374 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms