RNA–Protein interactions for RNA: ENST00000588032.5

TPM4-207, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 712 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-207ENST00000588032 CLEC20AQ6ZU45 233 aa10.69□□□□□ -0.7
TPM4-207ENST00000588032 UBR7Q8N806 425 aa10.69□□□□□ -0.7
TPM4-207ENST00000588032 KIAA1958Q8N8K9 716 aa10.69□□□□□ -0.7
TPM4-207ENST00000588032 ANKRD52Q8NB46 1076 aa10.69□□□□□ -0.7
TPM4-207ENST00000588032 ZMIZ2Q8NF64 920 aa10.69□□□□□ -0.7
TPM4-207ENST00000588032 FBXO32Q969P5 355 aa10.69□□□□□ -0.7
TPM4-207ENST00000588032 PRRX2Q99811 253 aa10.69□□□□□ -0.7
TPM4-207ENST00000588032 TUBGCP2Q9BSJ2 902 aa10.69□□□□□ -0.7
TPM4-207ENST00000588032 NAT10Q9H0A0 1025 aaKnown RBP10.69□□□□□ -0.7
TPM4-207ENST00000588032 INTS2Q9H0H0 1204 aaKnown RBP10.69□□□□□ -0.7
TPM4-207ENST00000588032 NDST4Q9H3R1 872 aa10.69□□□□□ -0.7
TPM4-207ENST00000588032 GCNT4Q9P109 453 aa10.69□□□□□ -0.7
TPM4-207ENST00000588032 HESX1Q9UBX0 185 aa10.69□□□□□ -0.7
TPM4-207ENST00000588032 NFE2L3Q9Y4A8 694 aa10.69□□□□□ -0.7
TPM4-207ENST00000588032 ARIH1Q9Y4X5 557 aaPredicted RBP10.69□□□□□ -0.7
TPM4-207ENST00000588032 PCDHB4Q9Y5E5 795 aa10.69□□□□□ -0.7
TPM4-207ENST00000588032 KRBA1A5PL33 1030 aa10.68□□□□□ -0.7
TPM4-207ENST00000588032 KCNJ18B7U540 433 aa10.68□□□□□ -0.7
TPM4-207ENST00000588032 STK25O00506 426 aa10.68□□□□□ -0.7
TPM4-207ENST00000588032 MAN2B1O00754 1011 aa10.68□□□□□ -0.7
TPM4-207ENST00000588032 TPM2P07951 284 aa10.68□□□□□ -0.7
TPM4-207ENST00000588032 TCF3P15923 654 aa10.68□□□□□ -0.7
TPM4-207ENST00000588032 ACO1P21399 889 aaKnown RBP10.68□□□□□ -0.7
TPM4-207ENST00000588032 RFX1P22670 979 aa10.68□□□□□ -0.7
TPM4-207ENST00000588032 AVPR2P30518 371 aa10.68□□□□□ -0.7
TPM4-207ENST00000588032 TUBP50607 506 aa10.68□□□□□ -0.7
TPM4-207ENST00000588032 GRM2Q14416 872 aa10.68□□□□□ -0.7
TPM4-207ENST00000588032 KCNJ12Q14500 433 aa10.68□□□□□ -0.7
TPM4-207ENST00000588032 MLF2Q15773 248 aaPredicted RBP10.68□□□□□ -0.7
TPM4-207ENST00000588032 EXOC3L4Q17RC7 722 aa10.68□□□□□ -0.7
TPM4-207ENST00000588032 TCP11X2Q5H9J9 407 aa10.68□□□□□ -0.7
TPM4-207ENST00000588032 CC2D1AQ6P1N0 951 aaPredicted RBP10.68□□□□□ -0.7
TPM4-207ENST00000588032 TRIM65Q6PJ69 517 aa10.68□□□□□ -0.7
TPM4-207ENST00000588032 TMEM270Q6UE05 265 aa10.68□□□□□ -0.7
TPM4-207ENST00000588032 RRAGAQ7L523 313 aa10.68□□□□□ -0.7
TPM4-207ENST00000588032 SPDYE1Q8NFV5 336 aaPredicted RBP10.68□□□□□ -0.7
TPM4-207ENST00000588032 CSGALNACT1Q8TDX6 532 aa10.68□□□□□ -0.7
TPM4-207ENST00000588032 USP13Q92995 863 aaPredicted RBP10.68□□□□□ -0.7
TPM4-207ENST00000588032 MSANTD3Q96H12 275 aa10.68□□□□□ -0.7
TPM4-207ENST00000588032 CYP2S1Q96SQ9 504 aa10.68□□□□□ -0.7
TPM4-207ENST00000588032 OSBPL6Q9BZF3 934 aa10.68□□□□□ -0.7
TPM4-207ENST00000588032 TRPC7Q9HCX4 862 aa10.68□□□□□ -0.7
TPM4-207ENST00000588032 UBE2TQ9NPD8 197 aaPredicted RBP10.68□□□□□ -0.7
TPM4-207ENST00000588032 TLR8Q9NR97 1041 aaKnown RBP10.68□□□□□ -0.7
TPM4-207ENST00000588032 TMEM63CQ9P1W3 806 aa10.68□□□□□ -0.7
TPM4-207ENST00000588032 CA14Q9ULX7 337 aa10.68□□□□□ -0.7
TPM4-207ENST00000588032 ARHGAP26Q9UNA1 814 aa10.68□□□□□ -0.7
TPM4-207ENST00000588032 CNTN6Q9UQ52 1028 aa10.68□□□□□ -0.7
TPM4-207ENST00000588032 SCML2Q9UQR0 700 aa10.68□□□□□ -0.7
TPM4-207ENST00000588032 MRPS17Q9Y2R5 130 aaKnown RBP10.68□□□□□ -0.7
TPM4-207ENST00000588032 HCN4Q9Y3Q4 1203 aa10.68□□□□□ -0.7
TPM4-207ENST00000588032 A0A0C4DFX4 3053 aa10.67□□□□□ -0.7
TPM4-207ENST00000588032 KANSL1LA0AUZ9 987 aa10.67□□□□□ -0.7
TPM4-207ENST00000588032 HHLA1C9JL84 531 aa10.67□□□□□ -0.7
TPM4-207ENST00000588032 PRAMEF12O95522 483 aa10.67□□□□□ -0.7
TPM4-207ENST00000588032 OLFM2O95897 454 aa10.67□□□□□ -0.7
TPM4-207ENST00000588032 ABL1P00519 1130 aa10.67□□□□□ -0.7
TPM4-207ENST00000588032 OAS1P00973 400 aaKnown RBP10.67□□□□□ -0.7
TPM4-207ENST00000588032 PDGFBP01127 241 aaPredicted RBP10.67□□□□□ -0.7
TPM4-207ENST00000588032 CKMP06732 381 aa10.67□□□□□ -0.7
TPM4-207ENST00000588032 ZDHHC11BP0C7U3 371 aa10.67□□□□□ -0.7
TPM4-207ENST00000588032 CD19P15391 556 aa10.67□□□□□ -0.7
TPM4-207ENST00000588032 AOC1P19801 751 aa10.67□□□□□ -0.7
TPM4-207ENST00000588032 COL9A1P20849 921 aa10.67□□□□□ -0.7
TPM4-207ENST00000588032 PON1P27169 355 aa10.67□□□□□ -0.7
TPM4-207ENST00000588032 PSEN1P49768 467 aa10.67□□□□□ -0.7
TPM4-207ENST00000588032 KIF11P52732 1056 aa10.67□□□□□ -0.7
TPM4-207ENST00000588032 BCAT1P54687 386 aa10.67□□□□□ -0.7
TPM4-207ENST00000588032 SLC7A9P82251 487 aa10.67□□□□□ -0.7
TPM4-207ENST00000588032 IFRD2Q12894 506 aaPredicted RBP10.67□□□□□ -0.7
TPM4-207ENST00000588032 CNGA2Q16280 664 aa10.67□□□□□ -0.7
TPM4-207ENST00000588032 KLHL40Q2TBA0 621 aa10.67□□□□□ -0.7
TPM4-207ENST00000588032 HECTD3Q5T447 861 aa10.67□□□□□ -0.7
TPM4-207ENST00000588032 ZNF852Q6ZMS4 543 aa10.67□□□□□ -0.7
TPM4-207ENST00000588032 DDX42Q86XP3 938 aaKnown RBP eCLIP10.67□□□□□ -0.7
TPM4-207ENST00000588032 ARHGEF19Q8IW93 802 aa10.67□□□□□ -0.7
TPM4-207ENST00000588032 ZNF276Q8N554 614 aa10.67□□□□□ -0.7
TPM4-207ENST00000588032 ARL14EPQ8N8R7 260 aaPredicted RBP10.67□□□□□ -0.7
TPM4-207ENST00000588032 ANKRD20A12PQ8NF67 263 aa10.67□□□□□ -0.7
TPM4-207ENST00000588032 FLCNQ8NFG4 579 aa10.67□□□□□ -0.7
TPM4-207ENST00000588032 SCAMP5Q8TAC9 235 aa10.67□□□□□ -0.7
TPM4-207ENST00000588032 RSPRY1Q96DX4 576 aa10.67□□□□□ -0.7
TPM4-207ENST00000588032 LRRC3BQ96PB8 259 aa10.67□□□□□ -0.7
TPM4-207ENST00000588032 CRACR2AQ9BSW2 395 aa10.67□□□□□ -0.7
TPM4-207ENST00000588032 DDX23Q9BUQ8 820 aaKnown RBP10.67□□□□□ -0.7
TPM4-207ENST00000588032 C8orf33Q9H7E9 229 aaPredicted RBP10.67□□□□□ -0.7
TPM4-207ENST00000588032 TBC1D17Q9HA65 648 aa10.67□□□□□ -0.7
TPM4-207ENST00000588032 SAMSN1Q9NSI8 373 aaKnown RBP10.67□□□□□ -0.7
TPM4-207ENST00000588032 APEX2Q9UBZ4 518 aa10.67□□□□□ -0.7
TPM4-207ENST00000588032 CHORDC1Q9UHD1 332 aaPredicted RBP10.67□□□□□ -0.7
TPM4-207ENST00000588032 TSPAN16Q9UKR8 245 aa10.67□□□□□ -0.7
TPM4-207ENST00000588032 SIT1Q9Y3P8 196 aa10.67□□□□□ -0.7
TPM4-207ENST00000588032 PTPRDP23468 1912 aa10.66□□□□□ -0.7
TPM4-207ENST00000588032 TECTAO75443 2155 aa10.66□□□□□ -0.7
TPM4-207ENST00000588032 VCANP13611 3396 aa10.66□□□□□ -0.7
TPM4-207ENST00000588032 C2orf78A6NCI8 922 aa10.66□□□□□ -0.7
TPM4-207ENST00000588032 ARNTLO00327 626 aa10.66□□□□□ -0.7
TPM4-207ENST00000588032 O00370 1275 aa10.66□□□□□ -0.7
TPM4-207ENST00000588032 XPO1O14980 1071 aaKnown RBP10.66□□□□□ -0.7
TPM4-207ENST00000588032 NCAM2O15394 837 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms