RNA–Protein interactions for RNA: ENST00000588009.1

TUBD1-208, Transcript of tubulin delta 1, humanhuman

TSL 3

Gene TUBD1, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-208ENST00000588009 GNRHR2Q96P88 292 aa6.25□□□□□ -1.41
TUBD1-208ENST00000588009 VPS16Q9H269 839 aa6.25□□□□□ -1.41
TUBD1-208ENST00000588009 RNPEPQ9H4A4 650 aa6.25□□□□□ -1.41
TUBD1-208ENST00000588009 VPS51Q9UID3 782 aa6.25□□□□□ -1.41
TUBD1-208ENST00000588009 NDRG4Q9ULP0 352 aaKnown RBP6.25□□□□□ -1.41
TUBD1-208ENST00000588009 AATKQ6ZMQ8 1374 aa6.25□□□□□ -1.41
TUBD1-208ENST00000588009 FER1L4A9Z1Z3 1794 aa6.24□□□□□ -1.41
TUBD1-208ENST00000588009 PNMA6EA0A0J9YXQ4 647 aa6.24□□□□□ -1.41
TUBD1-208ENST00000588009 FAM90A18PA6NE21 464 aa6.24□□□□□ -1.41
TUBD1-208ENST00000588009 FAM90A16PA6NEW6 464 aa6.24□□□□□ -1.41
TUBD1-208ENST00000588009 FAM90A9PA6NNJ1 464 aa6.24□□□□□ -1.41
TUBD1-208ENST00000588009 FAM90A5PA8MXJ8 464 aa6.24□□□□□ -1.41
TUBD1-208ENST00000588009 B4E171 279 aa6.24□□□□□ -1.41
TUBD1-208ENST00000588009 NPIPB6E9PJ23 425 aa6.24□□□□□ -1.41
TUBD1-208ENST00000588009 ZSCAN9O15535 394 aaPredicted RBP6.24□□□□□ -1.41
TUBD1-208ENST00000588009 DHHO43323 396 aa6.24□□□□□ -1.41
TUBD1-208ENST00000588009 HSP90AA1P07900 732 aaKnown RBP6.24□□□□□ -1.41
TUBD1-208ENST00000588009 FAM90A15PP0C7V4 464 aa6.24□□□□□ -1.41
TUBD1-208ENST00000588009 FAM90A14PP0C7W9 464 aa6.24□□□□□ -1.41
TUBD1-208ENST00000588009 ATP1A3P13637 1013 aa6.24□□□□□ -1.41
TUBD1-208ENST00000588009 HGFP14210 728 aa6.24□□□□□ -1.41
TUBD1-208ENST00000588009 KCNA2P16389 499 aa6.24□□□□□ -1.41
TUBD1-208ENST00000588009 RXRAP19793 462 aa6.24□□□□□ -1.41
TUBD1-208ENST00000588009 CAPN3P20807 821 aa6.24□□□□□ -1.41
TUBD1-208ENST00000588009 AKT1P31749 480 aa6.24□□□□□ -1.41
TUBD1-208ENST00000588009 TSPAN7P41732 249 aa6.24□□□□□ -1.41
TUBD1-208ENST00000588009 VAMP2P63027 116 aa6.24□□□□□ -1.41
TUBD1-208ENST00000588009 UBE3AQ05086 875 aa6.24□□□□□ -1.41
TUBD1-208ENST00000588009 MAPK7Q13164 816 aa6.24□□□□□ -1.41
TUBD1-208ENST00000588009 SLC12A1Q13621 1099 aa6.24□□□□□ -1.41
TUBD1-208ENST00000588009 DLGAP5Q15398 846 aa6.24□□□□□ -1.41
TUBD1-208ENST00000588009 ZNF124Q15973 351 aa6.24□□□□□ -1.41
TUBD1-208ENST00000588009 BTBD16Q32M84 506 aa6.24□□□□□ -1.41
TUBD1-208ENST00000588009 FBLN7Q53RD9 439 aa6.24□□□□□ -1.41
TUBD1-208ENST00000588009 ARHGAP40Q5TG30 622 aa6.24□□□□□ -1.41
TUBD1-208ENST00000588009 C1QL3Q5VWW1 255 aa6.24□□□□□ -1.41
TUBD1-208ENST00000588009 NFRKBQ6P4R8 1299 aa6.24□□□□□ -1.41
TUBD1-208ENST00000588009 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.24□□□□□ -1.41
TUBD1-208ENST00000588009 Q8NA96 180 aa6.24□□□□□ -1.41
TUBD1-208ENST00000588009 OR56A1Q8NGH5 318 aa6.24□□□□□ -1.41
TUBD1-208ENST00000588009 WDR60Q8WVS4 1066 aa6.24□□□□□ -1.41
TUBD1-208ENST00000588009 C3orf49Q96BT1 292 aa6.24□□□□□ -1.41
TUBD1-208ENST00000588009 MIEF2Q96C03 454 aa6.24□□□□□ -1.41
TUBD1-208ENST00000588009 ELAC1Q9H777 363 aaKnown RBP6.24□□□□□ -1.41
TUBD1-208ENST00000588009 FSCN3Q9NQT6 498 aa6.24□□□□□ -1.41
TUBD1-208ENST00000588009 TMEM160Q9NX00 188 aa6.24□□□□□ -1.41
TUBD1-208ENST00000588009 NEU2Q9Y3R4 380 aa6.24□□□□□ -1.41
TUBD1-208ENST00000588009 SPATA31A3Q5VYP0 1347 aa6.24□□□□□ -1.41
TUBD1-208ENST00000588009 LMTK3Q96Q04 1460 aa6.23□□□□□ -1.41
TUBD1-208ENST00000588009 A0A1B0GTW7 788 aa6.23□□□□□ -1.41
TUBD1-208ENST00000588009 PRSS47A8MTI9 375 aa6.23□□□□□ -1.41
TUBD1-208ENST00000588009 TOR1BO14657 336 aa6.23□□□□□ -1.41
TUBD1-208ENST00000588009 LAMTOR5O43504 91 aa6.23□□□□□ -1.41
TUBD1-208ENST00000588009 PPP6R2O75170 966 aa6.23□□□□□ -1.41
TUBD1-208ENST00000588009 RAD17O75943 681 aa6.23□□□□□ -1.41
TUBD1-208ENST00000588009 TSPAN15O95858 294 aa6.23□□□□□ -1.41
TUBD1-208ENST00000588009 HLA-DOAP06340 250 aa6.23□□□□□ -1.41
TUBD1-208ENST00000588009 FGFR4P22455 802 aa6.23□□□□□ -1.41
TUBD1-208ENST00000588009 PPIFP30405 207 aaKnown RBP6.23□□□□□ -1.41
TUBD1-208ENST00000588009 ANXA11P50995 505 aaKnown RBP6.23□□□□□ -1.41
TUBD1-208ENST00000588009 CCR5P51681 352 aa6.23□□□□□ -1.41
TUBD1-208ENST00000588009 RABGGTBP53611 331 aa6.23□□□□□ -1.41
TUBD1-208ENST00000588009 HSD11B2P80365 405 aa6.23□□□□□ -1.41
TUBD1-208ENST00000588009 MC2RQ01718 297 aa6.23□□□□□ -1.41
TUBD1-208ENST00000588009 FHL3Q13643 280 aa6.23□□□□□ -1.41
TUBD1-208ENST00000588009 E2F2Q14209 437 aa6.23□□□□□ -1.41
TUBD1-208ENST00000588009 L1TD1Q5T7N2 865 aaKnown RBP6.23□□□□□ -1.41
TUBD1-208ENST00000588009 TCERG1LQ5VWI1 586 aa6.23□□□□□ -1.41
TUBD1-208ENST00000588009 MZT2BQ6NZ67 158 aa6.23□□□□□ -1.41
TUBD1-208ENST00000588009 FOXR2Q6PJQ5 311 aa6.23□□□□□ -1.41
TUBD1-208ENST00000588009 ANKS1BQ7Z6G8 1248 aa6.23□□□□□ -1.41
TUBD1-208ENST00000588009 TTC30AQ86WT1 665 aa6.23□□□□□ -1.41
TUBD1-208ENST00000588009 SP8Q8IXZ3 490 aa6.23□□□□□ -1.41
TUBD1-208ENST00000588009 GSPT2Q8IYD1 628 aaKnown RBP6.23□□□□□ -1.41
TUBD1-208ENST00000588009 HVCN1Q96D96 273 aa6.23□□□□□ -1.41
TUBD1-208ENST00000588009 ZBTB45Q96K62 511 aaPredicted RBP6.23□□□□□ -1.41
TUBD1-208ENST00000588009 NEUROD6Q96NK8 337 aa6.23□□□□□ -1.41
TUBD1-208ENST00000588009 HIST1H2AAQ96QV6 131 aa6.23□□□□□ -1.41
TUBD1-208ENST00000588009 ZSWIM1Q9BR11 485 aa6.23□□□□□ -1.41
TUBD1-208ENST00000588009 NUDT22Q9BRQ3 303 aa6.23□□□□□ -1.41
TUBD1-208ENST00000588009 BRD8Q9H0E9 1235 aa6.23□□□□□ -1.41
TUBD1-208ENST00000588009 OSBPL5Q9H0X9 879 aaPredicted RBP6.23□□□□□ -1.41
TUBD1-208ENST00000588009 JMJD4Q9H9V9 463 aa6.23□□□□□ -1.41
TUBD1-208ENST00000588009 ALG13Q9NP73 1137 aaKnown RBP6.23□□□□□ -1.41
TUBD1-208ENST00000588009 C19orf53Q9UNZ5 99 aaPredicted RBP6.23□□□□□ -1.41
TUBD1-208ENST00000588009 USP15Q9Y4E8 981 aaPredicted RBP6.23□□□□□ -1.41
TUBD1-208ENST00000588009 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.23□□□□□ -1.41
TUBD1-208ENST00000588009 SLC30A1Q9Y6M5 507 aa6.23□□□□□ -1.41
TUBD1-208ENST00000588009 EFCAB8A8MWE9 144 aa6.22□□□□□ -1.41
TUBD1-208ENST00000588009 ADM5C9JUS6 153 aa6.22□□□□□ -1.41
TUBD1-208ENST00000588009 E7EVH7 732 aa6.22□□□□□ -1.41
TUBD1-208ENST00000588009 TAF5LO75529 589 aa6.22□□□□□ -1.41
TUBD1-208ENST00000588009 RNASEH2AO75792 299 aaKnown RBP6.22□□□□□ -1.41
TUBD1-208ENST00000588009 KRT38O76015 456 aa6.22□□□□□ -1.41
TUBD1-208ENST00000588009 BAIAP3O94812 1187 aa6.22□□□□□ -1.41
TUBD1-208ENST00000588009 GPANK1O95872 356 aa6.22□□□□□ -1.41
TUBD1-208ENST00000588009 LMNAP02545 664 aaKnown RBP6.22□□□□□ -1.41
TUBD1-208ENST00000588009 CSF1RP07333 972 aa6.22□□□□□ -1.41
TUBD1-208ENST00000588009 NTSR1P30989 418 aa6.22□□□□□ -1.41
TUBD1-208ENST00000588009 PRKAR1BP31321 381 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms