RNA–Protein interactions for RNA: ENST00000587776.1

HDAC5-206, Transcript of histone deacetylase 5, humanhuman

TSL 3

Gene HDAC5, Length 917 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-206ENST00000587776 USP24Q9UPU5 2620 aa16.14■□□□□ 0.17
HDAC5-206ENST00000587776 ZNF840PA6NDX5 716 aa16.14■□□□□ 0.17
HDAC5-206ENST00000587776 GIPC1O14908 333 aa16.14■□□□□ 0.17
HDAC5-206ENST00000587776 MAP3K13O43283 966 aa16.14■□□□□ 0.17
HDAC5-206ENST00000587776 KLF8O95600 359 aaPredicted RBP16.14■□□□□ 0.17
HDAC5-206ENST00000587776 ADH1CP00326 375 aa16.14■□□□□ 0.17
HDAC5-206ENST00000587776 SYT1P21579 422 aa16.14■□□□□ 0.17
HDAC5-206ENST00000587776 TIE1P35590 1138 aa16.14■□□□□ 0.17
HDAC5-206ENST00000587776 CYP2J2P51589 502 aa16.14■□□□□ 0.17
HDAC5-206ENST00000587776 ASIC1P78348 528 aa16.14■□□□□ 0.17
HDAC5-206ENST00000587776 SLC7A9P82251 487 aa16.14■□□□□ 0.17
HDAC5-206ENST00000587776 KDSRQ06136 332 aa16.14■□□□□ 0.17
HDAC5-206ENST00000587776 FOXC1Q12948 553 aa16.14■□□□□ 0.17
HDAC5-206ENST00000587776 TAF10Q12962 218 aa16.14■□□□□ 0.17
HDAC5-206ENST00000587776 CUL4AQ13619 759 aa16.14■□□□□ 0.17
HDAC5-206ENST00000587776 SLC39A14Q15043 492 aa16.14■□□□□ 0.17
HDAC5-206ENST00000587776 STK38Q15208 465 aa16.14■□□□□ 0.17
HDAC5-206ENST00000587776 DHCR24Q15392 516 aa16.14■□□□□ 0.17
HDAC5-206ENST00000587776 SNRNP35Q16560 246 aaKnown RBP16.14■□□□□ 0.17
HDAC5-206ENST00000587776 SH3PXD2AQ5TCZ1 1133 aa16.14■□□□□ 0.17
HDAC5-206ENST00000587776 TRAPPC11Q7Z392 1133 aa16.14■□□□□ 0.17
HDAC5-206ENST00000587776 RASSF3Q86WH2 238 aa16.14■□□□□ 0.17
HDAC5-206ENST00000587776 ALLCQ8N6M5 410 aa16.14■□□□□ 0.17
HDAC5-206ENST00000587776 PIGKQ92643 395 aa16.14■□□□□ 0.17
HDAC5-206ENST00000587776 C8orf48Q96LL4 319 aa16.14■□□□□ 0.17
HDAC5-206ENST00000587776 USP28Q96RU2 1077 aa16.14■□□□□ 0.17
HDAC5-206ENST00000587776 PNKPQ96T60 521 aa16.14■□□□□ 0.17
HDAC5-206ENST00000587776 MRPL45Q9BRJ2 306 aaKnown RBP16.14■□□□□ 0.17
HDAC5-206ENST00000587776 ELOVL4Q9GZR5 314 aa16.14■□□□□ 0.17
HDAC5-206ENST00000587776 RNF38Q9H0F5 515 aa16.14■□□□□ 0.17
HDAC5-206ENST00000587776 TNMDQ9H2S6 317 aa16.14■□□□□ 0.17
HDAC5-206ENST00000587776 POLMQ9NP87 494 aaPredicted RBP16.14■□□□□ 0.17
HDAC5-206ENST00000587776 PATE3B3GLJ2 98 aa16.13■□□□□ 0.17
HDAC5-206ENST00000587776 EIF3DO15371 548 aaKnown RBP eCLIP16.13■□□□□ 0.17
HDAC5-206ENST00000587776 ADH5P11766 374 aa16.13■□□□□ 0.17
HDAC5-206ENST00000587776 PTPN1P18031 435 aaKnown RBP16.13■□□□□ 0.17
HDAC5-206ENST00000587776 SLC6A11P48066 632 aa16.13■□□□□ 0.17
HDAC5-206ENST00000587776 TRPC3Q13507 836 aa16.13■□□□□ 0.17
HDAC5-206ENST00000587776 UAP1L1Q3KQV9 507 aa16.13■□□□□ 0.17
HDAC5-206ENST00000587776 WDR72Q3MJ13 1102 aa16.13■□□□□ 0.17
HDAC5-206ENST00000587776 LPCAT2Q7L5N7 544 aa16.13■□□□□ 0.17
HDAC5-206ENST00000587776 PGBD3Q8N328 593 aa16.13■□□□□ 0.17
HDAC5-206ENST00000587776 TXNDC5Q8NBS9 432 aaKnown RBP16.13■□□□□ 0.17
HDAC5-206ENST00000587776 WHAMMQ8TF30 809 aa16.13■□□□□ 0.17
HDAC5-206ENST00000587776 CCDC127Q96BQ5 260 aa16.13■□□□□ 0.17
HDAC5-206ENST00000587776 CGRRF1Q99675 332 aa16.13■□□□□ 0.17
HDAC5-206ENST00000587776 ARHGEF4Q9NR80 690 aa16.13■□□□□ 0.17
HDAC5-206ENST00000587776 ATP8B3O60423 1300 aa16.13■□□□□ 0.17
HDAC5-206ENST00000587776 ANTXRLA6NF34 631 aa16.12■□□□□ 0.17
HDAC5-206ENST00000587776 A8MXQ7 604 aa16.12■□□□□ 0.17
HDAC5-206ENST00000587776 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.12■□□□□ 0.17
HDAC5-206ENST00000587776 PHACTR2O75167 634 aa16.12■□□□□ 0.17
HDAC5-206ENST00000587776 TACC1O75410 805 aa16.12■□□□□ 0.17
HDAC5-206ENST00000587776 KAT7O95251 611 aa16.12■□□□□ 0.17
HDAC5-206ENST00000587776 OAS1P00973 400 aaKnown RBP16.12■□□□□ 0.17
HDAC5-206ENST00000587776 YWHAQP27348 245 aa16.12■□□□□ 0.17
HDAC5-206ENST00000587776 EIF2DP41214 584 aaKnown RBP16.12■□□□□ 0.17
HDAC5-206ENST00000587776 AMPD3Q01432 767 aa16.12■□□□□ 0.17
HDAC5-206ENST00000587776 GAB4Q2WGN9 574 aa16.12■□□□□ 0.17
HDAC5-206ENST00000587776 HSF5Q4G112 596 aaPredicted RBP16.12■□□□□ 0.17
HDAC5-206ENST00000587776 EOGTQ5NDL2 527 aa16.12■□□□□ 0.17
HDAC5-206ENST00000587776 TMEM92Q6UXU6 159 aa16.12■□□□□ 0.17
HDAC5-206ENST00000587776 ARMCX6Q7L4S7 300 aa16.12■□□□□ 0.17
HDAC5-206ENST00000587776 NELFCDQ8IXH7 590 aa16.12■□□□□ 0.17
HDAC5-206ENST00000587776 ADGRG2Q8IZP9 1017 aa16.12■□□□□ 0.17
HDAC5-206ENST00000587776 KIAA1958Q8N8K9 716 aa16.12■□□□□ 0.17
HDAC5-206ENST00000587776 IL17RCQ8NAC3 791 aa16.12■□□□□ 0.17
HDAC5-206ENST00000587776 B3GALNT2Q8NCR0 500 aa16.12■□□□□ 0.17
HDAC5-206ENST00000587776 PDZD8Q8NEN9 1154 aa16.12■□□□□ 0.17
HDAC5-206ENST00000587776 HMGB4Q8WW32 186 aa16.12■□□□□ 0.17
HDAC5-206ENST00000587776 RLN3Q8WXF3 142 aa16.12■□□□□ 0.17
HDAC5-206ENST00000587776 FBXO32Q969P5 355 aa16.12■□□□□ 0.17
HDAC5-206ENST00000587776 MED10Q9BTT4 135 aa16.12■□□□□ 0.17
HDAC5-206ENST00000587776 NUSAP1Q9BXS6 441 aaKnown RBP16.12■□□□□ 0.17
HDAC5-206ENST00000587776 ZNF518BQ9C0D4 1074 aa16.12■□□□□ 0.17
HDAC5-206ENST00000587776 DPEP3Q9H4B8 488 aa16.12■□□□□ 0.17
HDAC5-206ENST00000587776 TBC1D14Q9P2M4 693 aa16.12■□□□□ 0.17
HDAC5-206ENST00000587776 NXF1Q9UBU9 619 aaKnown RBP16.12■□□□□ 0.17
HDAC5-206ENST00000587776 LAMA1P25391 3075 aa16.11■□□□□ 0.17
HDAC5-206ENST00000587776 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.11■□□□□ 0.17
HDAC5-206ENST00000587776 SGK1O00141 431 aa16.11■□□□□ 0.17
HDAC5-206ENST00000587776 CLDN5O00501 218 aa16.11■□□□□ 0.17
HDAC5-206ENST00000587776 CLIC2O15247 247 aa16.11■□□□□ 0.17
HDAC5-206ENST00000587776 RTN3O95197 1032 aaPredicted RBP16.11■□□□□ 0.17
HDAC5-206ENST00000587776 OLFM2O95897 454 aa16.11■□□□□ 0.17
HDAC5-206ENST00000587776 CST3P01034 146 aaPredicted RBP16.11■□□□□ 0.17
HDAC5-206ENST00000587776 CACNA2D1P54289 1103 aa16.11■□□□□ 0.17
HDAC5-206ENST00000587776 CYP24A1Q07973 514 aa16.11■□□□□ 0.17
HDAC5-206ENST00000587776 PSMD6Q15008 389 aa16.11■□□□□ 0.17
HDAC5-206ENST00000587776 TRIM61Q5EBN2 209 aa16.11■□□□□ 0.17
HDAC5-206ENST00000587776 FAM26FQ5R3K3 315 aa16.11■□□□□ 0.17
HDAC5-206ENST00000587776 BTBD8Q5XKL5 378 aa16.11■□□□□ 0.17
HDAC5-206ENST00000587776 C12orf40Q86WS4 652 aa16.11■□□□□ 0.17
HDAC5-206ENST00000587776 SFTPA1Q8IWL2 248 aa16.11■□□□□ 0.17
HDAC5-206ENST00000587776 TMEFF1Q8IYR6 380 aa16.11■□□□□ 0.17
HDAC5-206ENST00000587776 NUP93Q8N1F7 819 aa16.11■□□□□ 0.17
HDAC5-206ENST00000587776 DHX58Q96C10 678 aa16.11■□□□□ 0.17
HDAC5-206ENST00000587776 TRIM9Q9C026 710 aa16.11■□□□□ 0.17
HDAC5-206ENST00000587776 CUEDC2Q9H467 287 aa16.11■□□□□ 0.17
HDAC5-206ENST00000587776 ZSCAN16Q9H4T2 348 aaPredicted RBP16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms