RNA–Protein interactions for RNA: ENST00000587740.5

NCLN-203, Transcript of nicalin, humanhuman

TSL 1 (best)

Gene NCLN, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-203ENST00000587740 VEPH1Q14D04 833 aa16.75■□□□□ 0.27
NCLN-203ENST00000587740 RBM43Q6ZSC3 357 aaKnown RBP16.75■□□□□ 0.27
NCLN-203ENST00000587740 INTS8Q75QN2 995 aaKnown RBP16.75■□□□□ 0.27
NCLN-203ENST00000587740 CSGALNACT2Q8N6G5 542 aa16.75■□□□□ 0.27
NCLN-203ENST00000587740 MAB21L3Q8N8X9 362 aa16.75■□□□□ 0.27
NCLN-203ENST00000587740 TMC2Q8TDI7 906 aa16.75■□□□□ 0.27
NCLN-203ENST00000587740 PARD3BQ8TEW8 1205 aa16.75■□□□□ 0.27
NCLN-203ENST00000587740 EEF2KMTQ96G04 330 aa16.75■□□□□ 0.27
NCLN-203ENST00000587740 MTMR12Q9C0I1 747 aa16.75■□□□□ 0.27
NCLN-203ENST00000587740 ITGA11Q9UKX5 1188 aa16.75■□□□□ 0.27
NCLN-203ENST00000587740 DMXL2Q8TDJ6 3036 aa16.75■□□□□ 0.27
NCLN-203ENST00000587740 MYO16Q9Y6X6 1858 aa16.75■□□□□ 0.27
NCLN-203ENST00000587740 WDFY3Q8IZQ1 3526 aa16.74■□□□□ 0.27
NCLN-203ENST00000587740 ANO9A1A5B4 782 aa16.74■□□□□ 0.27
NCLN-203ENST00000587740 ITGB3P05106 788 aa16.74■□□□□ 0.27
NCLN-203ENST00000587740 KRT19P08727 400 aa16.74■□□□□ 0.27
NCLN-203ENST00000587740 HAPLN1P10915 354 aaPredicted RBP16.74■□□□□ 0.27
NCLN-203ENST00000587740 PAX3P23760 479 aa16.74■□□□□ 0.27
NCLN-203ENST00000587740 AP3M2P53677 418 aa16.74■□□□□ 0.27
NCLN-203ENST00000587740 STX17P56962 302 aa16.74■□□□□ 0.27
NCLN-203ENST00000587740 CREB5Q02930 508 aa16.74■□□□□ 0.27
NCLN-203ENST00000587740 TXNDC8Q6A555 127 aa16.74■□□□□ 0.27
NCLN-203ENST00000587740 FOXR2Q6PJQ5 311 aa16.74■□□□□ 0.27
NCLN-203ENST00000587740 SASS6Q6UVJ0 657 aa16.74■□□□□ 0.27
NCLN-203ENST00000587740 C1orf127Q8N9H9 656 aa16.74■□□□□ 0.27
NCLN-203ENST00000587740 KDF1Q8NAX2 398 aaPredicted RBP16.74■□□□□ 0.27
NCLN-203ENST00000587740 STKLD1Q8NE28 680 aa16.74■□□□□ 0.27
NCLN-203ENST00000587740 OR5B17Q8NGF7 314 aa16.74■□□□□ 0.27
NCLN-203ENST00000587740 ZNF560Q96MR9 790 aa16.74■□□□□ 0.27
NCLN-203ENST00000587740 GCNAQ96QF7 691 aa16.74■□□□□ 0.27
NCLN-203ENST00000587740 TDP1Q9NUW8 608 aa16.74■□□□□ 0.27
NCLN-203ENST00000587740 TMEM63CQ9P1W3 806 aa16.74■□□□□ 0.27
NCLN-203ENST00000587740 AGAP1Q9UPQ3 857 aa16.74■□□□□ 0.27
NCLN-203ENST00000587740 PCNX2A6NKB5 2137 aa16.73■□□□□ 0.27
NCLN-203ENST00000587740 PTPRJQ12913 1337 aa16.73■□□□□ 0.27
NCLN-203ENST00000587740 THADAQ6YHU6 1953 aa16.73■□□□□ 0.27
NCLN-203ENST00000587740 CACNA1EQ15878 2313 aa16.73■□□□□ 0.27
NCLN-203ENST00000587740 LNP1A1A4G5 178 aa16.73■□□□□ 0.27
NCLN-203ENST00000587740 LRRIQ3A6PVS8 624 aaPredicted RBP16.73■□□□□ 0.27
NCLN-203ENST00000587740 SLC16A3O15427 465 aaKnown RBP16.73■□□□□ 0.27
NCLN-203ENST00000587740 CAVIN2O95810 425 aa16.73■□□□□ 0.27
NCLN-203ENST00000587740 DRD1P21728 446 aa16.73■□□□□ 0.27
NCLN-203ENST00000587740 POLR2BP30876 1174 aaKnown RBP16.73■□□□□ 0.27
NCLN-203ENST00000587740 GJA4P35212 333 aa16.73■□□□□ 0.27
NCLN-203ENST00000587740 AVPR1AP37288 418 aa16.73■□□□□ 0.27
NCLN-203ENST00000587740 PNPLA4P41247 253 aa16.73■□□□□ 0.27
NCLN-203ENST00000587740 TAF6P49848 677 aa16.73■□□□□ 0.27
NCLN-203ENST00000587740 VAMP7P51809 220 aa16.73■□□□□ 0.27
NCLN-203ENST00000587740 RBP5P82980 135 aa16.73■□□□□ 0.27
NCLN-203ENST00000587740 BFSP1Q12934 665 aa16.73■□□□□ 0.27
NCLN-203ENST00000587740 FOXC1Q12948 553 aa16.73■□□□□ 0.27
NCLN-203ENST00000587740 KLHL40Q2TBA0 621 aa16.73■□□□□ 0.27
NCLN-203ENST00000587740 TTI2Q6NXR4 508 aa16.73■□□□□ 0.27
NCLN-203ENST00000587740 CAVIN1Q6NZI2 390 aaKnown RBP16.73■□□□□ 0.27
NCLN-203ENST00000587740 SYT13Q7L8C5 426 aa16.73■□□□□ 0.27
NCLN-203ENST00000587740 ZC3H3Q8IXZ2 948 aaKnown RBP16.73■□□□□ 0.27
NCLN-203ENST00000587740 RPLP0P6Q8NHW5 317 aa16.73■□□□□ 0.27
NCLN-203ENST00000587740 FAM84AQ96KN4 292 aa16.73■□□□□ 0.27
NCLN-203ENST00000587740 CEP63Q96MT8 703 aa16.73■□□□□ 0.27
NCLN-203ENST00000587740 P2RY13Q9BPV8 354 aa16.73■□□□□ 0.27
NCLN-203ENST00000587740 EBF1Q9UH73 591 aa16.73■□□□□ 0.27
NCLN-203ENST00000587740 RWDD2AQ9UIY3 292 aa16.73■□□□□ 0.27
NCLN-203ENST00000587740 INVSQ9Y283 1065 aa16.73■□□□□ 0.27
NCLN-203ENST00000587740 KIAA1549LQ6ZVL6 1849 aa16.73■□□□□ 0.27
NCLN-203ENST00000587740 DSPP15924 2871 aaKnown RBP16.72■□□□□ 0.27
NCLN-203ENST00000587740 ANTXRLA6NF34 631 aa16.72■□□□□ 0.27
NCLN-203ENST00000587740 RHOBTB1O94844 696 aa16.72■□□□□ 0.27
NCLN-203ENST00000587740 FGFR1OPO95684 399 aaKnown RBP16.72■□□□□ 0.27
NCLN-203ENST00000587740 GPR15P49685 360 aa16.72■□□□□ 0.27
NCLN-203ENST00000587740 ENPEPQ07075 957 aa16.72■□□□□ 0.27
NCLN-203ENST00000587740 ZNF252P-AS1Q0IIN9 211 aa16.72■□□□□ 0.27
NCLN-203ENST00000587740 DMC1Q14565 340 aa16.72■□□□□ 0.27
NCLN-203ENST00000587740 ELF2Q15723 593 aa16.72■□□□□ 0.27
NCLN-203ENST00000587740 SKOR2Q2VWA4 1001 aaPredicted RBP16.72■□□□□ 0.27
NCLN-203ENST00000587740 DPCR1Q3MIW9 517 aa16.72■□□□□ 0.27
NCLN-203ENST00000587740 SV2CQ496J9 727 aa16.72■□□□□ 0.27
NCLN-203ENST00000587740 SH3PXD2AQ5TCZ1 1133 aa16.72■□□□□ 0.27
NCLN-203ENST00000587740 WSCD1Q658N2 575 aa16.72■□□□□ 0.27
NCLN-203ENST00000587740 TRAPPC11Q7Z392 1133 aa16.72■□□□□ 0.27
NCLN-203ENST00000587740 FILIP1Q7Z7B0 1213 aa16.72■□□□□ 0.27
NCLN-203ENST00000587740 PLEKHO2Q8TD55 490 aa16.72■□□□□ 0.27
NCLN-203ENST00000587740 DUSP9Q99956 384 aaKnown RBP16.72■□□□□ 0.27
NCLN-203ENST00000587740 GZF1Q9H116 711 aaPredicted RBP16.72■□□□□ 0.27
NCLN-203ENST00000587740 TMLHEQ9NVH6 421 aa16.72■□□□□ 0.27
NCLN-203ENST00000587740 ZMYM5Q9UJ78 669 aa16.72■□□□□ 0.27
NCLN-203ENST00000587740 CYB561D2O14569 222 aa16.71■□□□□ 0.27
NCLN-203ENST00000587740 CDX4O14627 284 aaPredicted RBP16.71■□□□□ 0.27
NCLN-203ENST00000587740 IKBKBO14920 756 aa16.71■□□□□ 0.27
NCLN-203ENST00000587740 PHACTR2O75167 634 aa16.71■□□□□ 0.27
NCLN-203ENST00000587740 TADA3O75528 432 aa16.71■□□□□ 0.27
NCLN-203ENST00000587740 APBB3O95704 486 aa16.71■□□□□ 0.27
NCLN-203ENST00000587740 DLG4P78352 724 aa16.71■□□□□ 0.27
NCLN-203ENST00000587740 CLDN10P78369 228 aa16.71■□□□□ 0.27
NCLN-203ENST00000587740 BIRC3Q13489 604 aa16.71■□□□□ 0.27
NCLN-203ENST00000587740 TRPC3Q13507 836 aa16.71■□□□□ 0.27
NCLN-203ENST00000587740 TAF12Q16514 161 aa16.71■□□□□ 0.27
NCLN-203ENST00000587740 FBXO43Q4G163 708 aa16.71■□□□□ 0.27
NCLN-203ENST00000587740 CT47A1Q5JQC4 288 aaPredicted RBP16.71■□□□□ 0.27
NCLN-203ENST00000587740 MON1AQ86VX9 555 aa16.71■□□□□ 0.27
NCLN-203ENST00000587740 LRRC52Q8N7C0 313 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms