RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 FUT8Q9BYC5 575 aa20.82■□□□□ 0.92
TRIM47-204ENST00000587339 DNAJB4Q9UDY4 337 aa20.82■□□□□ 0.92
TRIM47-204ENST00000587339 PCSK1NQ9UHG2 260 aa20.82■□□□□ 0.92
TRIM47-204ENST00000587339 USP18Q9UMW8 372 aa20.82■□□□□ 0.92
TRIM47-204ENST00000587339 UTP11Q9Y3A2 253 aaKnown RBP20.82■□□□□ 0.92
TRIM47-204ENST00000587339 LRRD1A4D1F6 860 aa20.82■□□□□ 0.92
TRIM47-204ENST00000587339 DPYSL4O14531 572 aa20.82■□□□□ 0.92
TRIM47-204ENST00000587339 AP1G2O75843 785 aa20.82■□□□□ 0.92
TRIM47-204ENST00000587339 CXCL10P02778 98 aa20.82■□□□□ 0.92
TRIM47-204ENST00000587339 TYMPP19971 482 aa20.82■□□□□ 0.92
TRIM47-204ENST00000587339 CARSP49589 748 aaKnown RBP20.82■□□□□ 0.92
TRIM47-204ENST00000587339 ADIGQ0VDE8 80 aa20.82■□□□□ 0.92
TRIM47-204ENST00000587339 CDO1Q16878 200 aa20.82■□□□□ 0.92
TRIM47-204ENST00000587339 TCTN1Q2MV58 587 aa20.82■□□□□ 0.92
TRIM47-204ENST00000587339 C15orf59Q2T9L4 293 aaPredicted RBP20.82■□□□□ 0.92
TRIM47-204ENST00000587339 CCDC14Q49A88 953 aa20.82■□□□□ 0.92
TRIM47-204ENST00000587339 INTS6LQ5JSJ4 861 aaKnown RBP20.82■□□□□ 0.92
TRIM47-204ENST00000587339 KCNT1Q5JUK3 1230 aa20.82■□□□□ 0.92
TRIM47-204ENST00000587339 SH3PXD2AQ5TCZ1 1133 aa20.82■□□□□ 0.92
TRIM47-204ENST00000587339 MFSD7Q6UXD7 560 aa20.82■□□□□ 0.92
TRIM47-204ENST00000587339 C12orf50Q8NA57 414 aaPredicted RBP20.82■□□□□ 0.92
TRIM47-204ENST00000587339 DIS3LQ8TF46 1054 aaKnown RBP20.82■□□□□ 0.92
TRIM47-204ENST00000587339 KCTD13Q8WZ19 329 aa20.82■□□□□ 0.92
TRIM47-204ENST00000587339 RAPGEF5Q92565 580 aa20.82■□□□□ 0.92
TRIM47-204ENST00000587339 RUNDC3BQ96NL0 473 aa20.82■□□□□ 0.92
TRIM47-204ENST00000587339 LRRC19Q9H756 370 aa20.82■□□□□ 0.92
TRIM47-204ENST00000587339 LRRC4Q9HBW1 653 aa20.82■□□□□ 0.92
TRIM47-204ENST00000587339 PCYOX1Q9UHG3 505 aa20.82■□□□□ 0.92
TRIM47-204ENST00000587339 PRG3Q9Y2Y8 225 aaPredicted RBP20.82■□□□□ 0.92
TRIM47-204ENST00000587339 CYP2C18P33260 490 aa20.81■□□□□ 0.92
TRIM47-204ENST00000587339 ATP11AP98196 1134 aa20.81■□□□□ 0.92
TRIM47-204ENST00000587339 YWHAHQ04917 246 aaPredicted RBP20.81■□□□□ 0.92
TRIM47-204ENST00000587339 TFDP3Q5H9I0 405 aa20.81■□□□□ 0.92
TRIM47-204ENST00000587339 TTC27Q6P3X3 843 aa20.81■□□□□ 0.92
TRIM47-204ENST00000587339 ARCQ7LC44 396 aa20.81■□□□□ 0.92
TRIM47-204ENST00000587339 ANKS1BQ7Z6G8 1248 aa20.81■□□□□ 0.92
TRIM47-204ENST00000587339 CCDC105Q8IYK2 499 aa20.81■□□□□ 0.92
TRIM47-204ENST00000587339 CASKIN2Q8WXE0 1202 aa20.81■□□□□ 0.92
TRIM47-204ENST00000587339 RAB17Q9H0T7 212 aa20.81■□□□□ 0.92
TRIM47-204ENST00000587339 PCDHB8Q9UN66 801 aa20.81■□□□□ 0.92
TRIM47-204ENST00000587339 HOXA2O43364 376 aa20.8■□□□□ 0.92
TRIM47-204ENST00000587339 TRAPPC3O43617 180 aa20.8■□□□□ 0.92
TRIM47-204ENST00000587339 COILP38432 576 aaPredicted RBP20.8■□□□□ 0.92
TRIM47-204ENST00000587339 FNTAP49354 379 aa20.8■□□□□ 0.92
TRIM47-204ENST00000587339 EFHC1Q5JVL4 640 aa20.8■□□□□ 0.92
TRIM47-204ENST00000587339 FAM171BQ6P995 826 aa20.8■□□□□ 0.92
TRIM47-204ENST00000587339 SPOCD1Q6ZMY3 1216 aa20.8■□□□□ 0.92
TRIM47-204ENST00000587339 HDXQ7Z353 690 aa20.8■□□□□ 0.92
TRIM47-204ENST00000587339 DEFB128Q7Z7B8 93 aa20.8■□□□□ 0.92
TRIM47-204ENST00000587339 SIX6OS1Q8N1H7 587 aa20.8■□□□□ 0.92
TRIM47-204ENST00000587339 AENQ8WTP8 325 aaKnown RBP20.8■□□□□ 0.92
TRIM47-204ENST00000587339 C1orf54Q8WWF1 131 aa20.8■□□□□ 0.92
TRIM47-204ENST00000587339 SMARCD1Q96GM5 515 aa20.8■□□□□ 0.92
TRIM47-204ENST00000587339 CASD1Q96PB1 797 aa20.8■□□□□ 0.92
TRIM47-204ENST00000587339 NFU1Q9UMS0 254 aa20.8■□□□□ 0.92
TRIM47-204ENST00000587339 ATP11BQ9Y2G3 1177 aa20.8■□□□□ 0.92
TRIM47-204ENST00000587339 TSC2P49815 1807 aa20.8■□□□□ 0.92
TRIM47-204ENST00000587339 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.8■□□□□ 0.92
TRIM47-204ENST00000587339 FAM187AA6NFU0 413 aa20.8■□□□□ 0.92
TRIM47-204ENST00000587339 TJP3O95049 919 aa20.8■□□□□ 0.92
TRIM47-204ENST00000587339 EPHB4P54760 987 aa20.8■□□□□ 0.92
TRIM47-204ENST00000587339 TRADDQ15628 312 aa20.8■□□□□ 0.92
TRIM47-204ENST00000587339 KAZNQ674X7 775 aa20.8■□□□□ 0.92
TRIM47-204ENST00000587339 OR10T2Q8NGX3 314 aa20.8■□□□□ 0.92
TRIM47-204ENST00000587339 MYLPFQ96A32 169 aa20.8■□□□□ 0.92
TRIM47-204ENST00000587339 KCNK16Q96T55 309 aa20.8■□□□□ 0.92
TRIM47-204ENST00000587339 NGRNQ9NPE2 291 aaKnown RBP20.8■□□□□ 0.92
TRIM47-204ENST00000587339 HOMER3Q9NSC5 361 aa20.8■□□□□ 0.92
TRIM47-204ENST00000587339 RASAL2Q9UJF2 1139 aa20.8■□□□□ 0.92
TRIM47-204ENST00000587339 TANC1Q9C0D5 1861 aa20.79■□□□□ 0.92
TRIM47-204ENST00000587339 TADA2AO75478 443 aa20.79■□□□□ 0.92
TRIM47-204ENST00000587339 SASH3O75995 380 aa20.79■□□□□ 0.92
TRIM47-204ENST00000587339 TRUB2O95900 331 aaKnown RBP20.79■□□□□ 0.92
TRIM47-204ENST00000587339 KRT10P13645 584 aa20.79■□□□□ 0.92
TRIM47-204ENST00000587339 PTPN7P35236 360 aa20.79■□□□□ 0.92
TRIM47-204ENST00000587339 GJA8P48165 433 aa20.79■□□□□ 0.92
TRIM47-204ENST00000587339 TSPY1Q01534 308 aa20.79■□□□□ 0.92
TRIM47-204ENST00000587339 CUL1Q13616 776 aa20.79■□□□□ 0.92
TRIM47-204ENST00000587339 MAPRE1Q15691 268 aaKnown RBP20.79■□□□□ 0.92
TRIM47-204ENST00000587339 JAMLQ86YT9 394 aa20.79■□□□□ 0.92
TRIM47-204ENST00000587339 DNAJC5GQ8N7S2 189 aa20.79■□□□□ 0.92
TRIM47-204ENST00000587339 FAM172AQ8WUF8 416 aa20.79■□□□□ 0.92
TRIM47-204ENST00000587339 ARMC5Q96C12 935 aa20.79■□□□□ 0.92
TRIM47-204ENST00000587339 GDAP1L1Q96MZ0 367 aa20.79■□□□□ 0.92
TRIM47-204ENST00000587339 SMOQ99835 787 aa20.79■□□□□ 0.92
TRIM47-204ENST00000587339 TRIM51Q9BSJ1 452 aa20.79■□□□□ 0.92
TRIM47-204ENST00000587339 TET1Q8NFU7 2136 aa20.79■□□□□ 0.92
TRIM47-204ENST00000587339 PRPSAP2O60256 369 aa20.78■□□□□ 0.92
TRIM47-204ENST00000587339 CDKN2BP42772 138 aa20.78■□□□□ 0.92
TRIM47-204ENST00000587339 PTPN9P43378 593 aa20.78■□□□□ 0.92
TRIM47-204ENST00000587339 TNNT3P45378 269 aaPredicted RBP20.78■□□□□ 0.92
TRIM47-204ENST00000587339 GATMP50440 423 aa20.78■□□□□ 0.92
TRIM47-204ENST00000587339 TKTL1P51854 596 aa20.78■□□□□ 0.92
TRIM47-204ENST00000587339 C1QTNF8P60827 252 aa20.78■□□□□ 0.92
TRIM47-204ENST00000587339 MRPS5P82675 430 aaKnown RBP20.78■□□□□ 0.92
TRIM47-204ENST00000587339 KCTD19Q17RG1 926 aaPredicted RBP20.78■□□□□ 0.92
TRIM47-204ENST00000587339 EMBQ6PCB8 327 aa20.78■□□□□ 0.92
TRIM47-204ENST00000587339 NPAS4Q8IUM7 802 aa20.78■□□□□ 0.92
TRIM47-204ENST00000587339 CRIPAKQ8N1N5 446 aa20.78■□□□□ 0.92
TRIM47-204ENST00000587339 EIF1ADQ8N9N8 165 aaKnown RBP20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms