RNA–Protein interactions for RNA: ENST00000586638.5

APOC1-201, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 425 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-201ENST00000586638 CRTAC1Q9NQ79 661 aa10.72□□□□□ -0.69
APOC1-201ENST00000586638 RBM12Q9NTZ6 932 aaKnown RBP10.72□□□□□ -0.69
APOC1-201ENST00000586638 LRFN2Q9ULH4 789 aa10.72□□□□□ -0.69
APOC1-201ENST00000586638 PRG3Q9Y2Y8 225 aaPredicted RBP10.72□□□□□ -0.69
APOC1-201ENST00000586638 KIAA1671Q9BY89 1806 aa10.72□□□□□ -0.69
APOC1-201ENST00000586638 TRANK1O15050 2925 aa10.71□□□□□ -0.69
APOC1-201ENST00000586638 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.71□□□□□ -0.69
APOC1-201ENST00000586638 TMEM191CA6NGB0 347 aa10.71□□□□□ -0.69
APOC1-201ENST00000586638 TCF4P15884 667 aa10.71□□□□□ -0.69
APOC1-201ENST00000586638 PTPN1P18031 435 aaKnown RBP10.71□□□□□ -0.69
APOC1-201ENST00000586638 KCNA5P22460 613 aa10.71□□□□□ -0.69
APOC1-201ENST00000586638 MAN1A1P33908 653 aa10.71□□□□□ -0.69
APOC1-201ENST00000586638 SLC1A1P43005 524 aa10.71□□□□□ -0.69
APOC1-201ENST00000586638 SSR1P43307 286 aaKnown RBP10.71□□□□□ -0.69
APOC1-201ENST00000586638 GABRB2P47870 512 aa10.71□□□□□ -0.69
APOC1-201ENST00000586638 OR1G1P47890 313 aa10.71□□□□□ -0.69
APOC1-201ENST00000586638 BCAR1P56945 870 aa10.71□□□□□ -0.69
APOC1-201ENST00000586638 MRPS25P82663 173 aaKnown RBP10.71□□□□□ -0.69
APOC1-201ENST00000586638 RNASELQ05823 741 aaKnown RBP10.71□□□□□ -0.69
APOC1-201ENST00000586638 FAM102AQ5T9C2 384 aaPredicted RBP10.71□□□□□ -0.69
APOC1-201ENST00000586638 FBXO38Q6PIJ6 1188 aa10.71□□□□□ -0.69
APOC1-201ENST00000586638 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.71□□□□□ -0.692e-6■■□□□ 11.9
APOC1-201ENST00000586638 FAM35AQ86V20 835 aa10.71□□□□□ -0.69
APOC1-201ENST00000586638 COLGALT2Q8IYK4 626 aa10.71□□□□□ -0.69
APOC1-201ENST00000586638 EMC1Q8N766 993 aa10.71□□□□□ -0.69
APOC1-201ENST00000586638 SPATA4Q8NEY3 305 aa10.71□□□□□ -0.69
APOC1-201ENST00000586638 FBXO22Q8NEZ5 403 aa10.71□□□□□ -0.69
APOC1-201ENST00000586638 RSPH1Q8WYR4 309 aa10.71□□□□□ -0.69
APOC1-201ENST00000586638 RPGRIP1Q96KN7 1286 aa10.71□□□□□ -0.69
APOC1-201ENST00000586638 RTP3Q9BQQ7 232 aa10.71□□□□□ -0.69
APOC1-201ENST00000586638 DNAI2Q9GZS0 605 aa10.71□□□□□ -0.69
APOC1-201ENST00000586638 CARD9Q9H257 536 aa10.71□□□□□ -0.69
APOC1-201ENST00000586638 ELAC1Q9H777 363 aaKnown RBP10.71□□□□□ -0.69
APOC1-201ENST00000586638 KRT82Q9NSB4 513 aa10.71□□□□□ -0.69
APOC1-201ENST00000586638 KLHL11Q9NVR0 708 aa10.71□□□□□ -0.69
APOC1-201ENST00000586638 WDR35Q9P2L0 1181 aa10.71□□□□□ -0.69
APOC1-201ENST00000586638 DNAJB4Q9UDY4 337 aa10.71□□□□□ -0.69
APOC1-201ENST00000586638 IP6K2Q9UHH9 426 aa10.71□□□□□ -0.69
APOC1-201ENST00000586638 PCDHB7Q9Y5E2 793 aa10.71□□□□□ -0.69
APOC1-201ENST00000586638 CCDC66A2RUB6 948 aa10.7□□□□□ -0.7
APOC1-201ENST00000586638 GRXCR2A6NFK2 248 aa10.7□□□□□ -0.7
APOC1-201ENST00000586638 SIGLEC16A6NMB1 481 aa10.7□□□□□ -0.7
APOC1-201ENST00000586638 TBKBP1A7MCY6 615 aa10.7□□□□□ -0.7
APOC1-201ENST00000586638 PRR33A8MZF0 331 aa10.7□□□□□ -0.7
APOC1-201ENST00000586638 M0QZQ0 153 aa10.7□□□□□ -0.7
APOC1-201ENST00000586638 PSTPIP1O43586 416 aa10.7□□□□□ -0.7
APOC1-201ENST00000586638 GRAP2O75791 330 aa10.7□□□□□ -0.7
APOC1-201ENST00000586638 GABBR2O75899 941 aa10.7□□□□□ -0.7
APOC1-201ENST00000586638 AMHP03971 560 aa10.7□□□□□ -0.7
APOC1-201ENST00000586638 FAM163BP0C2L3 166 aa10.7□□□□□ -0.7
APOC1-201ENST00000586638 KRT3P12035 628 aa10.7□□□□□ -0.7
APOC1-201ENST00000586638 ALADP13716 330 aa10.7□□□□□ -0.7
APOC1-201ENST00000586638 PSMA2P25787 234 aa10.7□□□□□ -0.7
APOC1-201ENST00000586638 LHX1P48742 406 aa10.7□□□□□ -0.7
APOC1-201ENST00000586638 PEX5P50542 639 aa10.7□□□□□ -0.7
APOC1-201ENST00000586638 ITIH3Q06033 890 aa10.7□□□□□ -0.7
APOC1-201ENST00000586638 ZNF268Q14587 947 aaPredicted RBP10.7□□□□□ -0.7
APOC1-201ENST00000586638 PUS10Q3MIT2 529 aaKnown RBP10.7□□□□□ -0.7
APOC1-201ENST00000586638 INTS6LQ5JSJ4 861 aaKnown RBP10.7□□□□□ -0.7
APOC1-201ENST00000586638 PTCRAQ6ISU1 281 aaPredicted RBP10.7□□□□□ -0.7
APOC1-201ENST00000586638 TRNP1Q6NT89 227 aa10.7□□□□□ -0.7
APOC1-201ENST00000586638 DCLRE1AQ6PJP8 1040 aa10.7□□□□□ -0.7
APOC1-201ENST00000586638 OLFML1Q6UWY5 402 aa10.7□□□□□ -0.7
APOC1-201ENST00000586638 PAQR9Q6ZVX9 377 aa10.7□□□□□ -0.7
APOC1-201ENST00000586638 ADAT2Q7Z6V5 191 aaKnown RBP10.7□□□□□ -0.7
APOC1-201ENST00000586638 ALYREFQ86V81 257 aaKnown RBP10.7□□□□□ -0.7
APOC1-201ENST00000586638 METTL23Q86XA0 190 aa10.7□□□□□ -0.7
APOC1-201ENST00000586638 NPAS4Q8IUM7 802 aa10.7□□□□□ -0.7
APOC1-201ENST00000586638 KLHL7Q8IXQ5 586 aa10.7□□□□□ -0.7
APOC1-201ENST00000586638 ABI1Q8IZP0 508 aa10.7□□□□□ -0.7
APOC1-201ENST00000586638 FUKQ8N0W3 1084 aa10.7□□□□□ -0.7
APOC1-201ENST00000586638 MMGT1Q8N4V1 131 aa10.7□□□□□ -0.7
APOC1-201ENST00000586638 GPR161Q8N6U8 529 aaKnown RBP10.7□□□□□ -0.7
APOC1-201ENST00000586638 ANKRD52Q8NB46 1076 aa10.7□□□□□ -0.7
APOC1-201ENST00000586638 ACTRT1Q8TDG2 376 aa10.7□□□□□ -0.7
APOC1-201ENST00000586638 CLEC4CQ8WTT0 213 aa10.7□□□□□ -0.7
APOC1-201ENST00000586638 MYLPFQ96A32 169 aa10.7□□□□□ -0.7
APOC1-201ENST00000586638 SUSD3Q96L08 255 aa10.7□□□□□ -0.7
APOC1-201ENST00000586638 CASD1Q96PB1 797 aa10.7□□□□□ -0.7
APOC1-201ENST00000586638 FAM193BQ96PV7 902 aaPredicted RBP10.7□□□□□ -0.7
APOC1-201ENST00000586638 TMEM209Q96SK2 561 aa10.7□□□□□ -0.7
APOC1-201ENST00000586638 PNKPQ96T60 521 aa10.7□□□□□ -0.7
APOC1-201ENST00000586638 C17orf80Q9BSJ5 609 aa10.7□□□□□ -0.7
APOC1-201ENST00000586638 AP1M1Q9BXS5 423 aa10.7□□□□□ -0.7
APOC1-201ENST00000586638 SLC4A5Q9BY07 1137 aa10.7□□□□□ -0.7
APOC1-201ENST00000586638 B3GNT5Q9BYG0 378 aa10.7□□□□□ -0.7
APOC1-201ENST00000586638 RHOBTB2Q9BYZ6 727 aa10.7□□□□□ -0.7
APOC1-201ENST00000586638 MIS12Q9H081 205 aa10.7□□□□□ -0.7
APOC1-201ENST00000586638 NRDE2Q9H7Z3 1164 aa10.7□□□□□ -0.7
APOC1-201ENST00000586638 RNF14Q9UBS8 474 aa10.7□□□□□ -0.7
APOC1-201ENST00000586638 CDH9Q9ULB4 789 aa10.7□□□□□ -0.7
APOC1-201ENST00000586638 PCDHB8Q9UN66 801 aa10.7□□□□□ -0.7
APOC1-201ENST00000586638 PCDHA3Q9Y5H8 950 aa10.7□□□□□ -0.7
APOC1-201ENST00000586638 MYBPHLA2RUH7 354 aa10.69□□□□□ -0.7
APOC1-201ENST00000586638 F8VP50 259 aa10.69□□□□□ -0.7
APOC1-201ENST00000586638 PAPSS1O43252 624 aaPredicted RBP10.69□□□□□ -0.7
APOC1-201ENST00000586638 FGGP02679 453 aa10.69□□□□□ -0.7
APOC1-201ENST00000586638 KRT1P04264 644 aa10.69□□□□□ -0.7
APOC1-201ENST00000586638 CYP11A1P05108 521 aa10.69□□□□□ -0.7
APOC1-201ENST00000586638 PYGMP11217 842 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms