RNA–Protein interactions for RNA: ENST00000585867.2

RBFOX1-222, Transcript of RNA binding fox-1 homolog 1, human

TSL 2 BASIC

Gene RBFOX1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBFOX1-222	ENST00000585867	C12orf29	Q8N999	325 aa		18.81	■□□□□ 0.6
RBFOX1-222	ENST00000585867	IPO4	Q8TEX9	1081 aa	Known RBP	18.81	■□□□□ 0.6
RBFOX1-222	ENST00000585867	PGLYRP2	Q96PD5	576 aa		18.81	■□□□□ 0.6
RBFOX1-222	ENST00000585867	CDX2	Q99626	313 aa	Predicted RBP	18.81	■□□□□ 0.6
RBFOX1-222	ENST00000585867	PARVA	Q9NVD7	372 aa		18.81	■□□□□ 0.6
RBFOX1-222	ENST00000585867	WDR35	Q9P2L0	1181 aa		18.81	■□□□□ 0.6
RBFOX1-222	ENST00000585867	CDC23	Q9UJX2	597 aa		18.81	■□□□□ 0.6
RBFOX1-222	ENST00000585867	HYOU1	Q9Y4L1	999 aa		18.81	■□□□□ 0.6
RBFOX1-222	ENST00000585867	ENC1	O14682	589 aa		18.8	■□□□□ 0.6
RBFOX1-222	ENST00000585867	ATMIN	O43313	823 aa	Predicted RBP	18.8	■□□□□ 0.6
RBFOX1-222	ENST00000585867	TGM5	O43548	720 aa		18.8	■□□□□ 0.6
RBFOX1-222	ENST00000585867	RRM1	P23921	792 aa		18.8	■□□□□ 0.6
RBFOX1-222	ENST00000585867	TERF1	P54274	439 aa		18.8	■□□□□ 0.6
RBFOX1-222	ENST00000585867	GSC	P56915	257 aa	Predicted RBP	18.8	■□□□□ 0.6
RBFOX1-222	ENST00000585867	PTP4A2	Q12974	167 aa		18.8	■□□□□ 0.6
RBFOX1-222	ENST00000585867	NFE2	Q16621	373 aa	Predicted RBP	18.8	■□□□□ 0.6
RBFOX1-222	ENST00000585867	DUSP6	Q16828	381 aa		18.8	■□□□□ 0.6
RBFOX1-222	ENST00000585867	WHAMMP3	Q1A5X7	153 aa		18.8	■□□□□ 0.6
RBFOX1-222	ENST00000585867	TCEAL5	Q5H9L2	206 aa		18.8	■□□□□ 0.6
RBFOX1-222	ENST00000585867	TPGS2	Q68CL5	300 aa		18.8	■□□□□ 0.6
RBFOX1-222	ENST00000585867	PEX26	Q7Z412	305 aa		18.8	■□□□□ 0.6
RBFOX1-222	ENST00000585867	MYLIP	Q8WY64	445 aa		18.8	■□□□□ 0.6
RBFOX1-222	ENST00000585867	MYLPF	Q96A32	169 aa		18.8	■□□□□ 0.6
RBFOX1-222	ENST00000585867	PCED1B	Q96HM7	432 aa		18.8	■□□□□ 0.6
RBFOX1-222	ENST00000585867	IGFLR1	Q9H665	355 aa		18.8	■□□□□ 0.6
RBFOX1-222	ENST00000585867	SYNC	Q9H7C4	482 aa		18.8	■□□□□ 0.6
RBFOX1-222	ENST00000585867	FAM49B	Q9NUQ9	324 aa		18.8	■□□□□ 0.6
RBFOX1-222	ENST00000585867	AMFR	Q9UKV5	643 aa		18.8	■□□□□ 0.6
RBFOX1-222	ENST00000585867	SNX12	Q9UMY4	172 aa		18.8	■□□□□ 0.6
RBFOX1-222	ENST00000585867	COG5	Q9UP83	839 aa		18.8	■□□□□ 0.6
RBFOX1-222	ENST00000585867	RIOK3	O14730	519 aa	Known RBP	18.79	■□□□□ 0.6
RBFOX1-222	ENST00000585867	BUB1B	O60566	1050 aa	Predicted RBP	18.79	■□□□□ 0.6
RBFOX1-222	ENST00000585867	GLUD1	P00367	558 aa		18.79	■□□□□ 0.6
RBFOX1-222	ENST00000585867	SPATA31D3	P0C874	917 aa		18.79	■□□□□ 0.6
RBFOX1-222	ENST00000585867	ATF2	P15336	505 aa		18.79	■□□□□ 0.6
RBFOX1-222	ENST00000585867	CLCN4	P51793	760 aa		18.79	■□□□□ 0.6
RBFOX1-222	ENST00000585867	BCAT1	P54687	386 aa		18.79	■□□□□ 0.6
RBFOX1-222	ENST00000585867	SLC8A3	P57103	927 aa		18.79	■□□□□ 0.6
RBFOX1-222	ENST00000585867	AMPD2	Q01433	879 aa		18.79	■□□□□ 0.6
RBFOX1-222	ENST00000585867	ADCY1	Q08828	1119 aa		18.79	■□□□□ 0.6
RBFOX1-222	ENST00000585867	SMARCB1	Q12824	385 aa		18.79	■□□□□ 0.6
RBFOX1-222	ENST00000585867	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	18.79	■□□□□ 0.6
RBFOX1-222	ENST00000585867	PLEKHA7	Q6IQ23	1121 aa		18.79	■□□□□ 0.6
RBFOX1-222	ENST00000585867	LILRA6	Q6PI73	481 aa		18.79	■□□□□ 0.6
RBFOX1-222	ENST00000585867	SPATA31D4	Q6ZUB0	917 aa		18.79	■□□□□ 0.6
RBFOX1-222	ENST00000585867	SPATA2L	Q8IUW3	424 aa	Predicted RBP	18.79	■□□□□ 0.6
RBFOX1-222	ENST00000585867	WDTC1	Q8N5D0	677 aa		18.79	■□□□□ 0.6
RBFOX1-222	ENST00000585867	ATAD1	Q8NBU5	361 aa		18.79	■□□□□ 0.6
RBFOX1-222	ENST00000585867	B3GNT5	Q9BYG0	378 aa		18.79	■□□□□ 0.6
RBFOX1-222	ENST00000585867	ABI2	Q9NYB9	513 aa	Predicted RBP	18.79	■□□□□ 0.6
RBFOX1-222	ENST00000585867	AFF4	Q9UHB7	1163 aa	Known RBP	18.79	■□□□□ 0.6
RBFOX1-222	ENST00000585867	PCDHB5	Q9Y5E4	795 aa		18.79	■□□□□ 0.6
RBFOX1-222	ENST00000585867	MYO7A	Q13402	2215 aa		18.79	■□□□□ 0.6
RBFOX1-222	ENST00000585867	MTMR11	A4FU01	709 aa		18.78	■□□□□ 0.6
RBFOX1-222	ENST00000585867	FTCD	O95954	541 aa		18.78	■□□□□ 0.6
RBFOX1-222	ENST00000585867	CCDC130	P13994	396 aa		18.78	■□□□□ 0.6
RBFOX1-222	ENST00000585867	GTF2F1	P35269	517 aa	Known RBP eCLIP	18.78	■□□□□ 0.6
RBFOX1-222	ENST00000585867	GPD2	P43304	727 aa		18.78	■□□□□ 0.6
RBFOX1-222	ENST00000585867	PDCL	Q13371	301 aa		18.78	■□□□□ 0.6
RBFOX1-222	ENST00000585867	RPS6KA1	Q15418	735 aa		18.78	■□□□□ 0.6
RBFOX1-222	ENST00000585867	DNAJC24	Q6P3W2	148 aa		18.78	■□□□□ 0.6
RBFOX1-222	ENST00000585867	C4orf50	Q6ZRC1	276 aa		18.78	■□□□□ 0.6
RBFOX1-222	ENST00000585867	C3orf20	Q8ND61	904 aa		18.78	■□□□□ 0.6
RBFOX1-222	ENST00000585867	SPPL2B	Q8TCT7	592 aa		18.78	■□□□□ 0.6
RBFOX1-222	ENST00000585867	STK32A	Q8WU08	396 aa		18.78	■□□□□ 0.6
RBFOX1-222	ENST00000585867	C2orf15	Q8WU43	125 aa	Known RBP	18.78	■□□□□ 0.6
RBFOX1-222	ENST00000585867	SLC22A17	Q8WUG5	538 aa		18.78	■□□□□ 0.6
RBFOX1-222	ENST00000585867	C18orf8	Q96DM3	657 aa		18.78	■□□□□ 0.6
RBFOX1-222	ENST00000585867	GUCD1	Q96NT3	240 aa		18.78	■□□□□ 0.6
RBFOX1-222	ENST00000585867	CDCA3	Q99618	268 aa	Predicted RBP	18.78	■□□□□ 0.6
RBFOX1-222	ENST00000585867	MED10	Q9BTT4	135 aa		18.78	■□□□□ 0.6
RBFOX1-222	ENST00000585867	ABCB6	Q9NP58	842 aa		18.78	■□□□□ 0.6
RBFOX1-222	ENST00000585867	CYLD	Q9NQC7	956 aa		18.78	■□□□□ 0.6
RBFOX1-222	ENST00000585867	FAM170A	A1A519	330 aa		18.77	■□□□□ 0.6
RBFOX1-222	ENST00000585867	VNN2	O95498	520 aa		18.77	■□□□□ 0.6
RBFOX1-222	ENST00000585867	ELF1	P32519	619 aa		18.77	■□□□□ 0.6
RBFOX1-222	ENST00000585867	GABRB2	P47870	512 aa		18.77	■□□□□ 0.6
RBFOX1-222	ENST00000585867	BST2	Q10589	180 aa	Known RBP	18.77	■□□□□ 0.6
RBFOX1-222	ENST00000585867	HYAL1	Q12794	435 aa		18.77	■□□□□ 0.6
RBFOX1-222	ENST00000585867	MICALL1	Q8N3F8	863 aa		18.77	■□□□□ 0.6
RBFOX1-222	ENST00000585867	ANKRD52	Q8NB46	1076 aa		18.77	■□□□□ 0.6
RBFOX1-222	ENST00000585867	SLC2A14	Q8TDB8	520 aa		18.77	■□□□□ 0.6
RBFOX1-222	ENST00000585867	HNRNPAB	Q99729	332 aa	Known RBP	18.77	■□□□□ 0.6
RBFOX1-222	ENST00000585867	CYP4F11	Q9HBI6	524 aa		18.77	■□□□□ 0.6
RBFOX1-222	ENST00000585867	MTMR10	Q9NXD2	777 aa		18.77	■□□□□ 0.6
RBFOX1-222	ENST00000585867	ANAPC7	Q9UJX3	599 aa		18.77	■□□□□ 0.6
RBFOX1-222	ENST00000585867	SLC27A5	Q9Y2P5	690 aa		18.77	■□□□□ 0.6
RBFOX1-222	ENST00000585867	HCFC2	Q9Y5Z7	792 aa		18.77	■□□□□ 0.6
RBFOX1-222	ENST00000585867	MIF4GD	A9UHW6	222 aa	Known RBP	18.76	■□□□□ 0.59
RBFOX1-222	ENST00000585867	MYO1F	O00160	1098 aa		18.76	■□□□□ 0.59
RBFOX1-222	ENST00000585867	CLDN5	O00501	218 aa		18.76	■□□□□ 0.59
RBFOX1-222	ENST00000585867	CES2	O00748	559 aa		18.76	■□□□□ 0.59
RBFOX1-222	ENST00000585867	SLU7	O95391	586 aa	Known RBP	18.76	■□□□□ 0.59
RBFOX1-222	ENST00000585867	SEC24A	O95486	1093 aa		18.76	■□□□□ 0.59
RBFOX1-222	ENST00000585867	C1R	P00736	705 aa		18.76	■□□□□ 0.59
RBFOX1-222	ENST00000585867	EPCAM	P16422	314 aa		18.76	■□□□□ 0.59
RBFOX1-222	ENST00000585867	ADORA2B	P29275	332 aa		18.76	■□□□□ 0.59
RBFOX1-222	ENST00000585867	CKAP4	Q07065	602 aa	Known RBP	18.76	■□□□□ 0.59
RBFOX1-222	ENST00000585867	DUSP4	Q13115	394 aa		18.76	■□□□□ 0.59
RBFOX1-222	ENST00000585867	MAMLD1	Q13495	774 aa		18.76	■□□□□ 0.59

Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms