RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 SGO2Q562F6 1265 aa13.35□□□□□ -0.27
VMP1-202ENST00000585847 ARHGAP17Q68EM7 881 aa13.35□□□□□ -0.27
VMP1-202ENST00000585847 TMEM184AQ6ZMB5 413 aa13.35□□□□□ -0.27
VMP1-202ENST00000585847 SPATA31D4Q6ZUB0 917 aa13.35□□□□□ -0.27
VMP1-202ENST00000585847 EFHBQ8N7U6 833 aa13.35□□□□□ -0.27
VMP1-202ENST00000585847 C12orf29Q8N999 325 aa13.35□□□□□ -0.27
VMP1-202ENST00000585847 ATAD1Q8NBU5 361 aa13.35□□□□□ -0.27
VMP1-202ENST00000585847 B3GALNT2Q8NCR0 500 aa13.35□□□□□ -0.27
VMP1-202ENST00000585847 ZNF461Q8TAF7 563 aa13.35□□□□□ -0.27
VMP1-202ENST00000585847 OLIG1Q8TAK6 271 aa13.35□□□□□ -0.27
VMP1-202ENST00000585847 STK32AQ8WU08 396 aa13.35□□□□□ -0.27
VMP1-202ENST00000585847 PCED1BQ96HM7 432 aa13.35□□□□□ -0.27
VMP1-202ENST00000585847 PGLYRP2Q96PD5 576 aa13.35□□□□□ -0.27
VMP1-202ENST00000585847 CDCA3Q99618 268 aaPredicted RBP13.35□□□□□ -0.27
VMP1-202ENST00000585847 B3GNT5Q9BYG0 378 aa13.35□□□□□ -0.27
VMP1-202ENST00000585847 ACP6Q9NPH0 428 aa13.35□□□□□ -0.27
VMP1-202ENST00000585847 RRAGDQ9NQL2 400 aaPredicted RBP13.35□□□□□ -0.27
VMP1-202ENST00000585847 TMEM30AQ9NV96 361 aa13.35□□□□□ -0.27
VMP1-202ENST00000585847 AFF4Q9UHB7 1163 aaKnown RBP13.35□□□□□ -0.27
VMP1-202ENST00000585847 GUCA1BQ9UMX6 200 aa13.35□□□□□ -0.27
VMP1-202ENST00000585847 CLDN5O00501 218 aa13.34□□□□□ -0.27
VMP1-202ENST00000585847 PAPLNO95428 1278 aa13.34□□□□□ -0.27
VMP1-202ENST00000585847 C1RP00736 705 aa13.34□□□□□ -0.27
VMP1-202ENST00000585847 CPB1P15086 417 aa13.34□□□□□ -0.27
VMP1-202ENST00000585847 ATF2P15336 505 aa13.34□□□□□ -0.27
VMP1-202ENST00000585847 PRLRP16471 622 aa13.34□□□□□ -0.27
VMP1-202ENST00000585847 CHRNB2P17787 502 aa13.34□□□□□ -0.27
VMP1-202ENST00000585847 SSTR3P32745 418 aaPredicted RBP13.34□□□□□ -0.27
VMP1-202ENST00000585847 CACNA2D1P54289 1103 aa13.34□□□□□ -0.27
VMP1-202ENST00000585847 DLX2Q07687 328 aaPredicted RBP13.34□□□□□ -0.27
VMP1-202ENST00000585847 MDH1BQ5I0G3 518 aa13.34□□□□□ -0.27
VMP1-202ENST00000585847 TPGS2Q68CL5 300 aa13.34□□□□□ -0.27
VMP1-202ENST00000585847 C11orf63Q6NUN7 778 aa13.34□□□□□ -0.27
VMP1-202ENST00000585847 LLGL2Q6P1M3 1020 aa13.34□□□□□ -0.27
VMP1-202ENST00000585847 LCLAT1Q6UWP7 414 aa13.34□□□□□ -0.27
VMP1-202ENST00000585847 FUKQ8N0W3 1084 aa13.34□□□□□ -0.27
VMP1-202ENST00000585847 C17orf53Q8N3J3 647 aaPredicted RBP13.34□□□□□ -0.27
VMP1-202ENST00000585847 MYCBPAPQ8TBZ2 947 aa13.34□□□□□ -0.27
VMP1-202ENST00000585847 ZNF606Q8WXB4 792 aa13.34□□□□□ -0.27
VMP1-202ENST00000585847 TFAP2BQ92481 460 aa13.34□□□□□ -0.27
VMP1-202ENST00000585847 MYLPFQ96A32 169 aa13.34□□□□□ -0.27
VMP1-202ENST00000585847 RHOBTB2Q9BYZ6 727 aa13.34□□□□□ -0.27
VMP1-202ENST00000585847 LACRTQ9GZZ8 138 aa13.34□□□□□ -0.27
VMP1-202ENST00000585847 IGFLR1Q9H665 355 aa13.34□□□□□ -0.27
VMP1-202ENST00000585847 UBE2ZQ9H832 354 aaPredicted RBP13.34□□□□□ -0.27
VMP1-202ENST00000585847 RNF14Q9UBS8 474 aa13.34□□□□□ -0.27
VMP1-202ENST00000585847 HESX1Q9UBX0 185 aa13.34□□□□□ -0.27
VMP1-202ENST00000585847 DNAI1Q9UI46 699 aa13.34□□□□□ -0.27
VMP1-202ENST00000585847 O00370 1275 aa13.33□□□□□ -0.28
VMP1-202ENST00000585847 CES2O00748 559 aa13.33□□□□□ -0.28
VMP1-202ENST00000585847 GPR37L1O60883 481 aa13.33□□□□□ -0.28
VMP1-202ENST00000585847 TBX10O75333 385 aa13.33□□□□□ -0.28
VMP1-202ENST00000585847 GLUD1P00367 558 aa13.33□□□□□ -0.28
VMP1-202ENST00000585847 FTLP02792 175 aaPredicted RBP13.33□□□□□ -0.28
VMP1-202ENST00000585847 CYP1A2P05177 515 aa13.33□□□□□ -0.28
VMP1-202ENST00000585847 MMEP08473 750 aa13.33□□□□□ -0.28
VMP1-202ENST00000585847 CCDC130P13994 396 aa13.33□□□□□ -0.28
VMP1-202ENST00000585847 TCP1P17987 556 aaKnown RBP13.33□□□□□ -0.28
VMP1-202ENST00000585847 KCNA5P22460 613 aa13.33□□□□□ -0.28
VMP1-202ENST00000585847 GALCP54803 685 aa13.33□□□□□ -0.28
VMP1-202ENST00000585847 NOMO3P69849 1222 aa13.33□□□□□ -0.28
VMP1-202ENST00000585847 TSPY1Q01534 308 aa13.33□□□□□ -0.28
VMP1-202ENST00000585847 ADCY1Q08828 1119 aa13.33□□□□□ -0.28
VMP1-202ENST00000585847 DUSP4Q13115 394 aa13.33□□□□□ -0.28
VMP1-202ENST00000585847 PPP1R26Q5T8A7 1209 aaPredicted RBP13.33□□□□□ -0.28
VMP1-202ENST00000585847 ZDHHC17Q8IUH5 632 aa13.33□□□□□ -0.28
VMP1-202ENST00000585847 DCP1BQ8IZD4 617 aaKnown RBP13.33□□□□□ -0.28
VMP1-202ENST00000585847 KREMEN2Q8NCW0 462 aa13.33□□□□□ -0.28
VMP1-202ENST00000585847 IPO4Q8TEX9 1081 aaKnown RBP13.33□□□□□ -0.28
VMP1-202ENST00000585847 SLC20A1Q8WUM9 679 aa13.33□□□□□ -0.28
VMP1-202ENST00000585847 RPGRIP1Q96KN7 1286 aa13.33□□□□□ -0.28
VMP1-202ENST00000585847 MAN1C1Q9NR34 630 aa13.33□□□□□ -0.28
VMP1-202ENST00000585847 FAM49BQ9NUQ9 324 aa13.33□□□□□ -0.28
VMP1-202ENST00000585847 TMEM51Q9NW97 253 aa13.33□□□□□ -0.28
VMP1-202ENST00000585847 CLEC1BQ9P126 229 aa13.33□□□□□ -0.28
VMP1-202ENST00000585847 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.33□□□□□ -0.28
VMP1-202ENST00000585847 SLC27A5Q9Y2P5 690 aa13.33□□□□□ -0.28
VMP1-202ENST00000585847 PATJQ8NI35 1801 aa13.33□□□□□ -0.28
VMP1-202ENST00000585847 BRWD1Q9NSI6 2320 aa13.32□□□□□ -0.28
VMP1-202ENST00000585847 MACROD2A1Z1Q3 448 aa13.32□□□□□ -0.28
VMP1-202ENST00000585847 MIF4GDA9UHW6 222 aaKnown RBP13.32□□□□□ -0.28
VMP1-202ENST00000585847 RFPL2O75678 378 aa13.32□□□□□ -0.28
VMP1-202ENST00000585847 SOAT2O75908 522 aa13.32□□□□□ -0.28
VMP1-202ENST00000585847 HAPLN1P10915 354 aaPredicted RBP13.32□□□□□ -0.28
VMP1-202ENST00000585847 CD19P15391 556 aa13.32□□□□□ -0.28
VMP1-202ENST00000585847 DESP17661 470 aa13.32□□□□□ -0.28
VMP1-202ENST00000585847 MMP8P22894 467 aa13.32□□□□□ -0.28
VMP1-202ENST00000585847 CYP2F1P24903 491 aa13.32□□□□□ -0.28
VMP1-202ENST00000585847 SCNN1AP37088 669 aa13.32□□□□□ -0.28
VMP1-202ENST00000585847 GPR15P49685 360 aa13.32□□□□□ -0.28
VMP1-202ENST00000585847 SMARCB1Q12824 385 aa13.32□□□□□ -0.28
VMP1-202ENST00000585847 ZNF569Q5MCW4 686 aa13.32□□□□□ -0.28
VMP1-202ENST00000585847 TAF3Q5VWG9 929 aa13.32□□□□□ -0.28
VMP1-202ENST00000585847 SYCE2Q6PIF2 218 aa13.32□□□□□ -0.28
VMP1-202ENST00000585847 SYT10Q6XYQ8 523 aa13.32□□□□□ -0.28
VMP1-202ENST00000585847 FAM35AQ86V20 835 aa13.32□□□□□ -0.28
VMP1-202ENST00000585847 GPIHBP1Q8IV16 184 aa13.32□□□□□ -0.28
VMP1-202ENST00000585847 TCEAL8Q8IYN2 117 aa13.32□□□□□ -0.28
VMP1-202ENST00000585847 ZMIZ2Q8NF64 920 aa13.32□□□□□ -0.28
VMP1-202ENST00000585847 NCAPGQ9BPX3 1015 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms