RNA–Protein interactions for RNA: ENST00000585799.5

SMARCA4-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,842 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-208ENST00000585799 CHMP6Q96FZ7 201 aa13.01□□□□□ -0.33
SMARCA4-208ENST00000585799 FGD4Q96M96 766 aa13.01□□□□□ -0.33
SMARCA4-208ENST00000585799 GRHL1Q9NZI5 618 aa13.01□□□□□ -0.33
SMARCA4-208ENST00000585799 MANSC4A6NHS7 340 aaPredicted RBP13.01□□□□□ -0.33
SMARCA4-208ENST00000585799 AP1G2O75843 785 aa13.01□□□□□ -0.33
SMARCA4-208ENST00000585799 DARSP14868 501 aaKnown RBP13.01□□□□□ -0.33
SMARCA4-208ENST00000585799 ELNP15502 786 aa13.01□□□□□ -0.33
SMARCA4-208ENST00000585799 SCNN1GP51170 649 aa13.01□□□□□ -0.33
SMARCA4-208ENST00000585799 CDC42EP1Q00587 391 aa13.01□□□□□ -0.33
SMARCA4-208ENST00000585799 PMF1Q6P1K2 205 aa13.01□□□□□ -0.33
SMARCA4-208ENST00000585799 MREGQ8N565 214 aa13.01□□□□□ -0.33
SMARCA4-208ENST00000585799 CCDC110Q8TBZ0 833 aa13.01□□□□□ -0.33
SMARCA4-208ENST00000585799 KLC2Q9H0B6 622 aa13.01□□□□□ -0.33
SMARCA4-208ENST00000585799 KLHL8Q9P2G9 620 aaPredicted RBP13.01□□□□□ -0.33
SMARCA4-208ENST00000585799 PRDM4Q9UKN5 801 aa13.01□□□□□ -0.33
SMARCA4-208ENST00000585799 CDY2AQ9Y6F7 541 aa13.01□□□□□ -0.33
SMARCA4-208ENST00000585799 ZBTB42B2RXF5 422 aa13□□□□□ -0.33
SMARCA4-208ENST00000585799 PPFIA2O75334 1257 aa13□□□□□ -0.33
SMARCA4-208ENST00000585799 HMGCRP04035 888 aa13□□□□□ -0.33
SMARCA4-208ENST00000585799 HADHBP55084 474 aaKnown RBP13□□□□□ -0.33
SMARCA4-208ENST00000585799 IL9RQ01113 521 aa13□□□□□ -0.33
SMARCA4-208ENST00000585799 STILQ15468 1287 aa13□□□□□ -0.33
SMARCA4-208ENST00000585799 TAF12Q16514 161 aa13□□□□□ -0.33
SMARCA4-208ENST00000585799 ZDHHC24Q6UX98 284 aa13□□□□□ -0.33
SMARCA4-208ENST00000585799 KDELC2Q7Z4H8 507 aa13□□□□□ -0.33
SMARCA4-208ENST00000585799 TTC17Q96AE7 1141 aa13□□□□□ -0.33
SMARCA4-208ENST00000585799 L3MBTL3Q96JM7 780 aaPredicted RBP13□□□□□ -0.33
SMARCA4-208ENST00000585799 NACA2Q9H009 215 aa13□□□□□ -0.33
SMARCA4-208ENST00000585799 XYLT2Q9H1B5 865 aa13□□□□□ -0.33
SMARCA4-208ENST00000585799 STK38LQ9Y2H1 464 aa13□□□□□ -0.33
SMARCA4-208ENST00000585799 ADGRA2Q96PE1 1338 aa13□□□□□ -0.33
SMARCA4-208ENST00000585799 SMIM28A0A1B0GU29 152 aa13□□□□□ -0.33
SMARCA4-208ENST00000585799 LIASO43766 372 aa13□□□□□ -0.33
SMARCA4-208ENST00000585799 CDH16O75309 829 aa13□□□□□ -0.33
SMARCA4-208ENST00000585799 MTA2O94776 668 aa13□□□□□ -0.33
SMARCA4-208ENST00000585799 NCAM1P13591 858 aa13□□□□□ -0.33
SMARCA4-208ENST00000585799 AKR1A1P14550 325 aa13□□□□□ -0.33
SMARCA4-208ENST00000585799 LMO2P25791 158 aa13□□□□□ -0.33
SMARCA4-208ENST00000585799 ITKQ08881 620 aa13□□□□□ -0.33
SMARCA4-208ENST00000585799 RGMBQ6NW40 437 aa13□□□□□ -0.33
SMARCA4-208ENST00000585799 SRLQ86TD4 932 aa13□□□□□ -0.33
SMARCA4-208ENST00000585799 TRABDQ9H4I3 376 aa13□□□□□ -0.33
SMARCA4-208ENST00000585799 DDX43Q9NXZ2 648 aaKnown RBP13□□□□□ -0.33
SMARCA4-208ENST00000585799 STAP1Q9ULZ2 295 aa13□□□□□ -0.33
SMARCA4-208ENST00000585799 WDR3Q9UNX4 943 aaKnown RBP eCLIP13□□□□□ -0.33
SMARCA4-208ENST00000585799 SSC5DA1L4H1 1573 aa13□□□□□ -0.33
SMARCA4-208ENST00000585799 hCG_1818297A0A087WSY0 165 aa13□□□□□ -0.33
SMARCA4-208ENST00000585799 E2F8A0AVK6 867 aa13□□□□□ -0.33
SMARCA4-208ENST00000585799 AMPD1P23109 780 aa13□□□□□ -0.33
SMARCA4-208ENST00000585799 GRM5P41594 1212 aa13□□□□□ -0.33
SMARCA4-208ENST00000585799 FLT3LGP49771 235 aa13□□□□□ -0.33
SMARCA4-208ENST00000585799 ATXN1P54253 815 aaKnown RBP13□□□□□ -0.33
SMARCA4-208ENST00000585799 DEUP1Q05D60 604 aa13□□□□□ -0.33
SMARCA4-208ENST00000585799 SPOUT1Q5T280 376 aaKnown RBP13□□□□□ -0.33
SMARCA4-208ENST00000585799 UBAP2Q5T6F2 1119 aaKnown RBP13□□□□□ -0.33
SMARCA4-208ENST00000585799 XYLT1Q86Y38 959 aa13□□□□□ -0.33
SMARCA4-208ENST00000585799 LRRC34Q8IZ02 419 aa13□□□□□ -0.33
SMARCA4-208ENST00000585799 USP33Q8TEY7 942 aa13□□□□□ -0.33
SMARCA4-208ENST00000585799 PTPN18Q99952 460 aa13□□□□□ -0.33
SMARCA4-208ENST00000585799 FGFR1OP2Q9NVK5 253 aa13□□□□□ -0.33
SMARCA4-208ENST00000585799 NUDT5Q9UKK9 219 aa13□□□□□ -0.33
SMARCA4-208ENST00000585799 A0A1B0GUA9 196 aa12.99□□□□□ -0.33
SMARCA4-208ENST00000585799 PTK6Q13882 451 aa12.99□□□□□ -0.33
SMARCA4-208ENST00000585799 NBPF20Q3BBV1 942 aa12.99□□□□□ -0.33
SMARCA4-208ENST00000585799 PID1Q7Z2X4 250 aa12.99□□□□□ -0.33
SMARCA4-208ENST00000585799 CD302Q8IX05 232 aa12.99□□□□□ -0.33
SMARCA4-208ENST00000585799 ATP11CQ8NB49 1132 aa12.99□□□□□ -0.33
SMARCA4-208ENST00000585799 ATXN7L3BQ96GX2 97 aa12.99□□□□□ -0.33
SMARCA4-208ENST00000585799 UBXN6Q9BZV1 441 aa12.99□□□□□ -0.33
SMARCA4-208ENST00000585799 SLC13A1Q9BZW2 595 aa12.99□□□□□ -0.33
SMARCA4-208ENST00000585799 KRT82Q9NSB4 513 aa12.99□□□□□ -0.33
SMARCA4-208ENST00000585799 C2CD2Q9Y426 696 aa12.99□□□□□ -0.33
SMARCA4-208ENST00000585799 THP07101 528 aa12.99□□□□□ -0.33
SMARCA4-208ENST00000585799 IL1R2P27930 398 aa12.99□□□□□ -0.33
SMARCA4-208ENST00000585799 SETDB1Q15047 1291 aa12.99□□□□□ -0.33
SMARCA4-208ENST00000585799 CCDC142Q17RM4 750 aa12.99□□□□□ -0.33
SMARCA4-208ENST00000585799 BOLA3Q53S33 107 aa12.99□□□□□ -0.33
SMARCA4-208ENST00000585799 UNC45BQ8IWX7 931 aa12.99□□□□□ -0.33
SMARCA4-208ENST00000585799 DEFB106AQ8N104 65 aa12.99□□□□□ -0.33
SMARCA4-208ENST00000585799 RAET1EQ8TD07 263 aa12.99□□□□□ -0.33
SMARCA4-208ENST00000585799 CLEC4CQ8WTT0 213 aa12.99□□□□□ -0.33
SMARCA4-208ENST00000585799 PIK3R5Q8WYR1 880 aa12.99□□□□□ -0.33
SMARCA4-208ENST00000585799 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.99□□□□□ -0.331e-7■□□□□ 11.2
SMARCA4-208ENST00000585799 KLHL14Q9P2G3 628 aa12.99□□□□□ -0.33
SMARCA4-208ENST00000585799 NENFQ9UMX5 172 aa12.99□□□□□ -0.33
SMARCA4-208ENST00000585799 NAALADL1Q9UQQ1 740 aa12.99□□□□□ -0.33
SMARCA4-208ENST00000585799 IGF2BP3O00425 579 aaKnown RBP eCLIP12.99□□□□□ -0.33
SMARCA4-208ENST00000585799 FAM200BP0CF97 657 aa12.99□□□□□ -0.33
SMARCA4-208ENST00000585799 BCAT1P54687 386 aa12.99□□□□□ -0.33
SMARCA4-208ENST00000585799 STAT4Q14765 748 aa12.99□□□□□ -0.33
SMARCA4-208ENST00000585799 VPS52Q8N1B4 723 aa12.99□□□□□ -0.33
SMARCA4-208ENST00000585799 FBXO36Q8NEA4 188 aa12.99□□□□□ -0.33
SMARCA4-208ENST00000585799 ART4Q93070 314 aa12.99□□□□□ -0.33
SMARCA4-208ENST00000585799 PIWIL1Q96J94 861 aaKnown RBP12.99□□□□□ -0.33
SMARCA4-208ENST00000585799 ZMAT2Q96NC0 199 aaKnown RBP12.99□□□□□ -0.33
SMARCA4-208ENST00000585799 TGS1Q96RS0 853 aaKnown RBP12.99□□□□□ -0.33
SMARCA4-208ENST00000585799 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.99□□□□□ -0.33
SMARCA4-208ENST00000585799 ST3GAL5Q9UNP4 418 aa12.99□□□□□ -0.33
SMARCA4-208ENST00000585799 AP4E1Q9UPM8 1137 aa12.99□□□□□ -0.33
SMARCA4-208ENST00000585799 NR2E3Q9Y5X4 410 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms