RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 PRPSAP2O60256 369 aa11.8□□□□□ -0.52
LIG3-204ENST00000585740 ADAMTS4O75173 837 aa11.8□□□□□ -0.52
LIG3-204ENST00000585740 SKIP12755 728 aa11.8□□□□□ -0.52
LIG3-204ENST00000585740 KLRC2P26717 231 aa11.8□□□□□ -0.52
LIG3-204ENST00000585740 HOXD10P28358 340 aa11.8□□□□□ -0.52
LIG3-204ENST00000585740 MGAT3Q09327 533 aa11.8□□□□□ -0.52
LIG3-204ENST00000585740 OASLQ15646 514 aaKnown RBP11.8□□□□□ -0.52
LIG3-204ENST00000585740 IZUMO3Q5VZ72 239 aa11.8□□□□□ -0.52
LIG3-204ENST00000585740 GDF6Q6KF10 455 aaPredicted RBP11.8□□□□□ -0.52
LIG3-204ENST00000585740 OLFML1Q6UWY5 402 aa11.8□□□□□ -0.52
LIG3-204ENST00000585740 CXCL17Q6UXB2 119 aa11.8□□□□□ -0.52
LIG3-204ENST00000585740 ANKS1BQ7Z6G8 1248 aa11.8□□□□□ -0.52
LIG3-204ENST00000585740 RFX6Q8HWS3 928 aa11.8□□□□□ -0.52
LIG3-204ENST00000585740 RELL1Q8IUW5 271 aa11.8□□□□□ -0.52
LIG3-204ENST00000585740 ADGRF2Q8IZF7 708 aa11.8□□□□□ -0.52
LIG3-204ENST00000585740 TMEM86AQ8N2M4 240 aa11.8□□□□□ -0.52
LIG3-204ENST00000585740 ARFGAP1Q8N6T3 406 aa11.8□□□□□ -0.52
LIG3-204ENST00000585740 C12orf29Q8N999 325 aa11.8□□□□□ -0.52
LIG3-204ENST00000585740 KLHDC9Q8NEP7 349 aa11.8□□□□□ -0.52
LIG3-204ENST00000585740 SPATA18Q8TC71 538 aa11.8□□□□□ -0.52
LIG3-204ENST00000585740 PPP1R13LQ8WUF5 828 aa11.8□□□□□ -0.52
LIG3-204ENST00000585740 KBTBD7Q8WVZ9 684 aa11.8□□□□□ -0.52
LIG3-204ENST00000585740 ZBTB9Q96C00 473 aa11.8□□□□□ -0.52
LIG3-204ENST00000585740 PGM2Q96G03 612 aa11.8□□□□□ -0.52
LIG3-204ENST00000585740 MAK16Q9BXY0 300 aaKnown RBP11.8□□□□□ -0.52
LIG3-204ENST00000585740 SENP6Q9GZR1 1112 aaPredicted RBP11.8□□□□□ -0.52
LIG3-204ENST00000585740 CXCL16Q9H2A7 254 aa11.8□□□□□ -0.52
LIG3-204ENST00000585740 RNF39Q9H2S5 420 aa11.8□□□□□ -0.52
LIG3-204ENST00000585740 CENPHQ9H3R5 247 aa11.8□□□□□ -0.52
LIG3-204ENST00000585740 CNOT10Q9H9A5 744 aaKnown RBP11.8□□□□□ -0.52
LIG3-204ENST00000585740 XPNPEP3Q9NQH7 507 aa11.8□□□□□ -0.52
LIG3-204ENST00000585740 FAM49BQ9NUQ9 324 aa11.8□□□□□ -0.52
LIG3-204ENST00000585740 FAM105AQ9NUU6 356 aa11.8□□□□□ -0.52
LIG3-204ENST00000585740 DNPEPQ9ULA0 475 aa11.8□□□□□ -0.52
LIG3-204ENST00000585740 ST3GAL5Q9UNP4 418 aa11.8□□□□□ -0.52
LIG3-204ENST00000585740 APOC4-APOC2K7ER74 178 aa11.79□□□□□ -0.52
LIG3-204ENST00000585740 CYB561D2O14569 222 aa11.79□□□□□ -0.52
LIG3-204ENST00000585740 XPO1O14980 1071 aaKnown RBP11.79□□□□□ -0.52
LIG3-204ENST00000585740 CST8O60676 142 aa11.79□□□□□ -0.52
LIG3-204ENST00000585740 CAND2O75155 1236 aa11.79□□□□□ -0.52
LIG3-204ENST00000585740 ENDOD1O94919 500 aa11.79□□□□□ -0.52
LIG3-204ENST00000585740 PGK1P00558 417 aa11.79□□□□□ -0.52
LIG3-204ENST00000585740 APOC2P02655 101 aa11.79□□□□□ -0.52
LIG3-204ENST00000585740 THP07101 528 aa11.79□□□□□ -0.52
LIG3-204ENST00000585740 IL1R2P27930 398 aa11.79□□□□□ -0.52
LIG3-204ENST00000585740 ATP5DP30049 168 aa11.79□□□□□ -0.52
LIG3-204ENST00000585740 RPL9P32969 192 aaKnown RBP11.79□□□□□ -0.52
LIG3-204ENST00000585740 PTPN9P43378 593 aa11.79□□□□□ -0.52
LIG3-204ENST00000585740 RGS7P49802 495 aa11.79□□□□□ -0.52
LIG3-204ENST00000585740 LILRA4P59901 499 aa11.79□□□□□ -0.52
LIG3-204ENST00000585740 GNGT1P63211 74 aa11.79□□□□□ -0.52
LIG3-204ENST00000585740 CAP1Q01518 475 aa11.79□□□□□ -0.52
LIG3-204ENST00000585740 CACNB2Q08289 660 aaPredicted RBP11.79□□□□□ -0.52
LIG3-204ENST00000585740 PDE4CQ08493 712 aa11.79□□□□□ -0.52
LIG3-204ENST00000585740 MORF4L2Q15014 288 aa11.79□□□□□ -0.52
LIG3-204ENST00000585740 EFHC1Q5JVL4 640 aa11.79□□□□□ -0.52
LIG3-204ENST00000585740 KCTD16Q68DU8 428 aa11.79□□□□□ -0.52
LIG3-204ENST00000585740 TXNRD3NBQ6F5E7 133 aa11.79□□□□□ -0.52
LIG3-204ENST00000585740 HIBCHQ6NVY1 386 aaPredicted RBP11.79□□□□□ -0.52
LIG3-204ENST00000585740 PMF1Q6P1K2 205 aa11.79□□□□□ -0.52
LIG3-204ENST00000585740 CHRDL2Q6WN34 429 aa11.79□□□□□ -0.52
LIG3-204ENST00000585740 SLC26A9Q7LBE3 791 aa11.79□□□□□ -0.52
LIG3-204ENST00000585740 MRPL10Q7Z7H8 261 aaKnown RBP11.79□□□□□ -0.52
LIG3-204ENST00000585740 OR2W6PQ8NHA6 318 aa11.79□□□□□ -0.52
LIG3-204ENST00000585740 SLC35B2Q8TB61 432 aa11.79□□□□□ -0.52
LIG3-204ENST00000585740 PGBD4Q96DM1 585 aa11.79□□□□□ -0.52
LIG3-204ENST00000585740 ZNF333Q96JL9 665 aa11.79□□□□□ -0.52
LIG3-204ENST00000585740 TTC25Q96NG3 672 aa11.79□□□□□ -0.52
LIG3-204ENST00000585740 HNRNPABQ99729 332 aaKnown RBP11.79□□□□□ -0.52
LIG3-204ENST00000585740 CCDC77Q9BR77 488 aa11.79□□□□□ -0.52
LIG3-204ENST00000585740 PHACTR1Q9C0D0 580 aa11.79□□□□□ -0.52
LIG3-204ENST00000585740 EPB41L4BQ9H329 900 aa11.79□□□□□ -0.52
LIG3-204ENST00000585740 PRDM16Q9HAZ2 1276 aa11.79□□□□□ -0.52
LIG3-204ENST00000585740 UBN1Q9NPG3 1134 aa11.79□□□□□ -0.52
LIG3-204ENST00000585740 CALCOCO1Q9P1Z2 691 aa11.79□□□□□ -0.52
LIG3-204ENST00000585740 PCSK1NQ9UHG2 260 aa11.79□□□□□ -0.52
LIG3-204ENST00000585740 TPX2Q9ULW0 747 aaKnown RBP11.79□□□□□ -0.52
LIG3-204ENST00000585740 SQORQ9Y6N5 450 aa11.79□□□□□ -0.52
LIG3-204ENST00000585740 TDRD15B5MCY1 1934 aaKnown RBP11.78□□□□□ -0.52
LIG3-204ENST00000585740 ARHGEF37A1IGU5 675 aa11.78□□□□□ -0.52
LIG3-204ENST00000585740 PTGESO14684 152 aa11.78□□□□□ -0.52
LIG3-204ENST00000585740 MCF2LO15068 1137 aa11.78□□□□□ -0.52
LIG3-204ENST00000585740 MDM4O15151 490 aa11.78□□□□□ -0.52
LIG3-204ENST00000585740 RGS16O15492 202 aaPredicted RBP11.78□□□□□ -0.52
LIG3-204ENST00000585740 PAPSS1O43252 624 aaPredicted RBP11.78□□□□□ -0.52
LIG3-204ENST00000585740 ZNF623O75123 536 aa11.78□□□□□ -0.52
LIG3-204ENST00000585740 AGTP01019 485 aa11.78□□□□□ -0.52
LIG3-204ENST00000585740 MYCP01106 439 aaPredicted RBP11.78□□□□□ -0.52
LIG3-204ENST00000585740 PDGFRBP09619 1106 aa11.78□□□□□ -0.52
LIG3-204ENST00000585740 FGFR1P11362 822 aa11.78□□□□□ -0.52
LIG3-204ENST00000585740 ADORA2BP29275 332 aa11.78□□□□□ -0.52
LIG3-204ENST00000585740 LHX1P48742 406 aa11.78□□□□□ -0.52
LIG3-204ENST00000585740 IRAK1P51617 712 aa11.78□□□□□ -0.52
LIG3-204ENST00000585740 CDH6P55285 790 aa11.78□□□□□ -0.52
LIG3-204ENST00000585740 PPP2R2AP63151 447 aa11.78□□□□□ -0.52
LIG3-204ENST00000585740 OTUD4Q01804 1114 aaKnown RBP11.78□□□□□ -0.52
LIG3-204ENST00000585740 PLCB3Q01970 1234 aa11.78□□□□□ -0.52
LIG3-204ENST00000585740 SP3Q02447 781 aa11.78□□□□□ -0.52
LIG3-204ENST00000585740 PRKCZQ05513 592 aa11.78□□□□□ -0.52
LIG3-204ENST00000585740 SOX4Q06945 474 aaPredicted RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms