RNA–Protein interactions for RNA: ENST00000584991.5

CDK5RAP3-236, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-236ENST00000584991 PNPLA4P41247 253 aa15.75■□□□□ 0.11
CDK5RAP3-236ENST00000584991 TAF6P49848 677 aa15.75■□□□□ 0.11
CDK5RAP3-236ENST00000584991 PTK6Q13882 451 aa15.75■□□□□ 0.11
CDK5RAP3-236ENST00000584991 SGO2Q562F6 1265 aa15.75■□□□□ 0.11
CDK5RAP3-236ENST00000584991 AADACL2Q6P093 401 aa15.75■□□□□ 0.11
CDK5RAP3-236ENST00000584991 DEFB128Q7Z7B8 93 aa15.75■□□□□ 0.11
CDK5RAP3-236ENST00000584991 RELL1Q8IUW5 271 aa15.75■□□□□ 0.11
CDK5RAP3-236ENST00000584991 CCDC13Q8IYE1 715 aa15.75■□□□□ 0.11
CDK5RAP3-236ENST00000584991 MCOLN2Q8IZK6 566 aa15.75■□□□□ 0.11
CDK5RAP3-236ENST00000584991 ATL2Q8NHH9 583 aa15.75■□□□□ 0.11
CDK5RAP3-236ENST00000584991 ATXN2LQ8WWM7 1075 aaKnown RBP15.75■□□□□ 0.11
CDK5RAP3-236ENST00000584991 SNF8Q96H20 258 aa15.75■□□□□ 0.11
CDK5RAP3-236ENST00000584991 INTS9Q9NV88 658 aaKnown RBP15.75■□□□□ 0.11
CDK5RAP3-236ENST00000584991 KPNA7A9QM74 516 aa15.74■□□□□ 0.11
CDK5RAP3-236ENST00000584991 PSTPIP1O43586 416 aa15.74■□□□□ 0.11
CDK5RAP3-236ENST00000584991 CILPO75339 1184 aa15.74■□□□□ 0.11
CDK5RAP3-236ENST00000584991 RASSF9O75901 435 aa15.74■□□□□ 0.11
CDK5RAP3-236ENST00000584991 PARNO95453 639 aaKnown RBP15.74■□□□□ 0.11
CDK5RAP3-236ENST00000584991 SSTR3P32745 418 aaPredicted RBP15.74■□□□□ 0.11
CDK5RAP3-236ENST00000584991 ORC1Q13415 861 aa15.74■□□□□ 0.11
CDK5RAP3-236ENST00000584991 RHBDF2Q6PJF5 856 aa15.74■□□□□ 0.11
CDK5RAP3-236ENST00000584991 ZNF606Q8WXB4 792 aa15.74■□□□□ 0.11
CDK5RAP3-236ENST00000584991 CCT6BQ92526 530 aa15.74■□□□□ 0.11
CDK5RAP3-236ENST00000584991 APBB2Q92870 758 aa15.74■□□□□ 0.11
CDK5RAP3-236ENST00000584991 TWNKQ96RR1 684 aa15.74■□□□□ 0.11
CDK5RAP3-236ENST00000584991 TACO1Q9BSH4 297 aaKnown RBP15.74■□□□□ 0.11
CDK5RAP3-236ENST00000584991 ADAM7Q9H2U9 754 aa15.74■□□□□ 0.11
CDK5RAP3-236ENST00000584991 MRPL47Q9HD33 250 aaKnown RBP15.74■□□□□ 0.11
CDK5RAP3-236ENST00000584991 HMGXB4Q9UGU5 601 aa15.74■□□□□ 0.11
CDK5RAP3-236ENST00000584991 CASTOR2A6NHX0 329 aa15.74■□□□□ 0.11
CDK5RAP3-236ENST00000584991 NDC80O14777 642 aa15.74■□□□□ 0.11
CDK5RAP3-236ENST00000584991 CXCL10P02778 98 aa15.74■□□□□ 0.11
CDK5RAP3-236ENST00000584991 CYP1A1P04798 512 aaPredicted RBP15.74■□□□□ 0.11
CDK5RAP3-236ENST00000584991 CFHP08603 1231 aa15.74■□□□□ 0.11
CDK5RAP3-236ENST00000584991 IGFBP6P24592 240 aaPredicted RBP15.74■□□□□ 0.11
CDK5RAP3-236ENST00000584991 CLCNKBP51801 687 aa15.74■□□□□ 0.11
CDK5RAP3-236ENST00000584991 RAD23BP54727 409 aa15.74■□□□□ 0.11
CDK5RAP3-236ENST00000584991 LILRA4P59901 499 aa15.74■□□□□ 0.11
CDK5RAP3-236ENST00000584991 LMNB2Q03252 620 aa15.74■□□□□ 0.11
CDK5RAP3-236ENST00000584991 GRIK3Q13003 919 aa15.74■□□□□ 0.11
CDK5RAP3-236ENST00000584991 AUHQ13825 339 aaKnown RBP15.74■□□□□ 0.11
CDK5RAP3-236ENST00000584991 QPCTQ16769 361 aa15.74■□□□□ 0.11
CDK5RAP3-236ENST00000584991 SV2CQ496J9 727 aa15.74■□□□□ 0.11
CDK5RAP3-236ENST00000584991 ANKRD20A8PQ5CZ79 823 aa15.74■□□□□ 0.11
CDK5RAP3-236ENST00000584991 LIN9Q5TKA1 542 aa15.74■□□□□ 0.11
CDK5RAP3-236ENST00000584991 CCDC114Q96M63 670 aa15.74■□□□□ 0.11
CDK5RAP3-236ENST00000584991 PLCD4Q9BRC7 762 aa15.74■□□□□ 0.11
CDK5RAP3-236ENST00000584991 MRPL45Q9BRJ2 306 aaKnown RBP15.74■□□□□ 0.11
CDK5RAP3-236ENST00000584991 ELOVL4Q9GZR5 314 aa15.74■□□□□ 0.11
CDK5RAP3-236ENST00000584991 ANAPC7Q9UJX3 599 aa15.74■□□□□ 0.11
CDK5RAP3-236ENST00000584991 BARX2Q9UMQ3 279 aaPredicted RBP15.74■□□□□ 0.11
CDK5RAP3-236ENST00000584991 DNAJC8O75937 253 aaPredicted RBP15.73■□□□□ 0.11
CDK5RAP3-236ENST00000584991 FGFR1P11362 822 aa15.73■□□□□ 0.11
CDK5RAP3-236ENST00000584991 BRD2P25440 801 aaKnown RBP15.73■□□□□ 0.11
CDK5RAP3-236ENST00000584991 CETN2P41208 172 aa15.73■□□□□ 0.11
CDK5RAP3-236ENST00000584991 GTF2A1P52655 376 aaPredicted RBP15.73■□□□□ 0.11
CDK5RAP3-236ENST00000584991 INCA1Q0VD86 236 aa15.73■□□□□ 0.11
CDK5RAP3-236ENST00000584991 CCNG2Q16589 344 aa15.73■□□□□ 0.11
CDK5RAP3-236ENST00000584991 SOWAHAQ2M3V2 549 aa15.73■□□□□ 0.11
CDK5RAP3-236ENST00000584991 CLLU1OSQ5K130 101 aa15.73■□□□□ 0.11
CDK5RAP3-236ENST00000584991 FBXW10Q5XX13 1052 aa15.73■□□□□ 0.11
CDK5RAP3-236ENST00000584991 GLB1LQ6UWU2 654 aa15.73■□□□□ 0.11
CDK5RAP3-236ENST00000584991 MAGEC3Q8TD91 643 aa15.73■□□□□ 0.11
CDK5RAP3-236ENST00000584991 TMEM161AQ9NX61 479 aa15.73■□□□□ 0.11
CDK5RAP3-236ENST00000584991 GDAP2Q9NXN4 497 aa15.73■□□□□ 0.11
CDK5RAP3-236ENST00000584991 SAMD15Q9P1V8 674 aa15.73■□□□□ 0.11
CDK5RAP3-236ENST00000584991 TLDC2A0PJX2 215 aa15.72■□□□□ 0.11
CDK5RAP3-236ENST00000584991 CCT8L1PA6NM43 557 aa15.72■□□□□ 0.11
CDK5RAP3-236ENST00000584991 CD19P15391 556 aa15.72■□□□□ 0.11
CDK5RAP3-236ENST00000584991 NSFP46459 744 aaKnown RBP15.72■□□□□ 0.11
CDK5RAP3-236ENST00000584991 NDST1P52848 882 aa15.72■□□□□ 0.11
CDK5RAP3-236ENST00000584991 KRT17Q04695 432 aa15.72■□□□□ 0.11
CDK5RAP3-236ENST00000584991 XRCC4Q13426 336 aa15.72■□□□□ 0.11
CDK5RAP3-236ENST00000584991 TTC39CQ8N584 583 aa15.72■□□□□ 0.11
CDK5RAP3-236ENST00000584991 SLC4A11Q8NBS3 891 aa15.72■□□□□ 0.11
CDK5RAP3-236ENST00000584991 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.72■□□□□ 0.11
CDK5RAP3-236ENST00000584991 CCHCR1Q8TD31 782 aa15.72■□□□□ 0.11
CDK5RAP3-236ENST00000584991 TFAP2BQ92481 460 aa15.72■□□□□ 0.11
CDK5RAP3-236ENST00000584991 TMEM176AQ96HP8 235 aa15.72■□□□□ 0.11
CDK5RAP3-236ENST00000584991 PAAF1Q9BRP4 392 aa15.72■□□□□ 0.11
CDK5RAP3-236ENST00000584991 FAM124BQ9H5Z6 455 aaPredicted RBP15.72■□□□□ 0.11
CDK5RAP3-236ENST00000584991 KLC4Q9NSK0 619 aa15.72■□□□□ 0.11
CDK5RAP3-236ENST00000584991 PCDHB7Q9Y5E2 793 aa15.72■□□□□ 0.11
CDK5RAP3-236ENST00000584991 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.72■□□□□ 0.11
CDK5RAP3-236ENST00000584991 TTC3P53804 2025 aa15.72■□□□□ 0.11
CDK5RAP3-236ENST00000584991 INPPL1O15357 1258 aa15.71■□□□□ 0.11
CDK5RAP3-236ENST00000584991 ATMINO43313 823 aaPredicted RBP15.71■□□□□ 0.11
CDK5RAP3-236ENST00000584991 PROSCO94903 275 aa15.71■□□□□ 0.11
CDK5RAP3-236ENST00000584991 TTC4O95801 387 aa15.71■□□□□ 0.11
CDK5RAP3-236ENST00000584991 IVDP26440 423 aa15.71■□□□□ 0.11
CDK5RAP3-236ENST00000584991 RPL9P32969 192 aaKnown RBP15.71■□□□□ 0.11
CDK5RAP3-236ENST00000584991 PASD1Q8IV76 773 aa15.71■□□□□ 0.11
CDK5RAP3-236ENST00000584991 RHOT1Q8IXI2 618 aa15.71■□□□□ 0.11
CDK5RAP3-236ENST00000584991 CCDC89Q8N998 374 aa15.71■□□□□ 0.11
CDK5RAP3-236ENST00000584991 C3orf58Q8NDZ4 430 aa15.71■□□□□ 0.11
CDK5RAP3-236ENST00000584991 SELENOSQ9BQE4 189 aa15.71■□□□□ 0.11
CDK5RAP3-236ENST00000584991 ELAC1Q9H777 363 aaKnown RBP15.71■□□□□ 0.11
CDK5RAP3-236ENST00000584991 PRDM5Q9NQX1 630 aaPredicted RBP15.71■□□□□ 0.11
CDK5RAP3-236ENST00000584991 ACTL7BQ9Y614 415 aa15.71■□□□□ 0.11
CDK5RAP3-236ENST00000584991 SCINQ9Y6U3 715 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms