RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 GOLGA8IPA6NC78 632 aa11.94□□□□□ -0.5
CCDC47-206ENST00000584112 ZNF233A6NK53 670 aa11.94□□□□□ -0.5
CCDC47-206ENST00000584112 GOLGA8JA6NMD2 632 aa11.94□□□□□ -0.5
CCDC47-206ENST00000584112 ARNTLO00327 626 aa11.94□□□□□ -0.5
CCDC47-206ENST00000584112 SH3BP5O60239 455 aa11.94□□□□□ -0.5
CCDC47-206ENST00000584112 HUS1O60921 280 aa11.94□□□□□ -0.5
CCDC47-206ENST00000584112 GJA1P17302 382 aa11.94□□□□□ -0.5
CCDC47-206ENST00000584112 BCKDHBP21953 392 aa11.94□□□□□ -0.5
CCDC47-206ENST00000584112 VIPR2P41587 438 aa11.94□□□□□ -0.5
CCDC47-206ENST00000584112 ME1P48163 572 aa11.94□□□□□ -0.5
CCDC47-206ENST00000584112 DHPSP49366 369 aaPredicted RBP11.94□□□□□ -0.5
CCDC47-206ENST00000584112 KPNA1P52294 538 aaPredicted RBP11.94□□□□□ -0.5
CCDC47-206ENST00000584112 MYL7Q01449 175 aa11.94□□□□□ -0.5
CCDC47-206ENST00000584112 TAF12Q16514 161 aa11.94□□□□□ -0.5
CCDC47-206ENST00000584112 MGAT5BQ3V5L5 792 aa11.94□□□□□ -0.5
CCDC47-206ENST00000584112 ARHGAP15Q53QZ3 475 aa11.94□□□□□ -0.5
CCDC47-206ENST00000584112 FAM26FQ5R3K3 315 aa11.94□□□□□ -0.5
CCDC47-206ENST00000584112 TOGARAM2Q6ZUX3 1019 aa11.94□□□□□ -0.5
CCDC47-206ENST00000584112 DNAJB7Q7Z6W7 309 aaPredicted RBP11.94□□□□□ -0.5
CCDC47-206ENST00000584112 YAF2Q8IY57 180 aa11.94□□□□□ -0.5
CCDC47-206ENST00000584112 TMEM86AQ8N2M4 240 aa11.94□□□□□ -0.5
CCDC47-206ENST00000584112 TTC9BQ8N6N2 239 aa11.94□□□□□ -0.5
CCDC47-206ENST00000584112 C1orf127Q8N9H9 656 aa11.94□□□□□ -0.5
CCDC47-206ENST00000584112 ZSWIM2Q8NEG5 633 aa11.94□□□□□ -0.5
CCDC47-206ENST00000584112 FAM200AQ8TCP9 573 aa11.94□□□□□ -0.5
CCDC47-206ENST00000584112 ANKRD36BP1Q96IX9 119 aa11.94□□□□□ -0.5
CCDC47-206ENST00000584112 GCNAQ96QF7 691 aa11.94□□□□□ -0.5
CCDC47-206ENST00000584112 SEPT5Q99719 369 aaPredicted RBP11.94□□□□□ -0.5
CCDC47-206ENST00000584112 C7orf25Q9BPX7 421 aa11.94□□□□□ -0.5
CCDC47-206ENST00000584112 NUSAP1Q9BXS6 441 aaKnown RBP11.94□□□□□ -0.5
CCDC47-206ENST00000584112 KIAA1586Q9HCI6 787 aa11.94□□□□□ -0.5
CCDC47-206ENST00000584112 POLMQ9NP87 494 aaPredicted RBP11.94□□□□□ -0.5
CCDC47-206ENST00000584112 ZMYM5Q9UJ78 669 aa11.94□□□□□ -0.5
CCDC47-206ENST00000584112 TNRC6BQ9UPQ9 1833 aaKnown RBP11.94□□□□□ -0.5
CCDC47-206ENST00000584112 SPTBN1Q01082 2364 aaKnown RBP11.94□□□□□ -0.5
CCDC47-206ENST00000584112 CENPEQ02224 2701 aa11.93□□□□□ -0.5
CCDC47-206ENST00000584112 FAM149AA5PLN7 773 aa11.93□□□□□ -0.5
CCDC47-206ENST00000584112 ERVH48-1M5A8F1 160 aa11.93□□□□□ -0.5
CCDC47-206ENST00000584112 ZNF263O14978 683 aa11.93□□□□□ -0.5
CCDC47-206ENST00000584112 POLR2DO15514 142 aaKnown RBP11.93□□□□□ -0.5
CCDC47-206ENST00000584112 TLX3O43711 291 aaPredicted RBP11.93□□□□□ -0.5
CCDC47-206ENST00000584112 TNNC2P02585 160 aa11.93□□□□□ -0.5
CCDC47-206ENST00000584112 KRT19P08727 400 aa11.93□□□□□ -0.5
CCDC47-206ENST00000584112 GABRR2P28476 465 aa11.93□□□□□ -0.5
CCDC47-206ENST00000584112 CDC25CP30307 473 aa11.93□□□□□ -0.5
CCDC47-206ENST00000584112 WNT7BP56706 349 aa11.93□□□□□ -0.5
CCDC47-206ENST00000584112 SNRPFP62306 86 aaKnown RBP11.93□□□□□ -0.5
CCDC47-206ENST00000584112 RBP5P82980 135 aa11.93□□□□□ -0.5
CCDC47-206ENST00000584112 BFSP1Q12934 665 aa11.93□□□□□ -0.5
CCDC47-206ENST00000584112 MYO1EQ12965 1108 aa11.93□□□□□ -0.5
CCDC47-206ENST00000584112 CAMK2BQ13554 666 aa11.93□□□□□ -0.5
CCDC47-206ENST00000584112 NFE2Q16621 373 aaPredicted RBP11.93□□□□□ -0.5
CCDC47-206ENST00000584112 FOXD4L6Q3SYB3 417 aaPredicted RBP11.93□□□□□ -0.5
CCDC47-206ENST00000584112 FOXD4L3Q6VB84 417 aaPredicted RBP11.93□□□□□ -0.5
CCDC47-206ENST00000584112 UNC13DQ70J99 1090 aa11.93□□□□□ -0.5
CCDC47-206ENST00000584112 TMPRSS7Q7RTY8 843 aa11.93□□□□□ -0.5
CCDC47-206ENST00000584112 MFSD6LQ8IWD5 586 aa11.93□□□□□ -0.5
CCDC47-206ENST00000584112 PDCL2Q8N4E4 241 aa11.93□□□□□ -0.5
CCDC47-206ENST00000584112 CSGALNACT2Q8N6G5 542 aa11.93□□□□□ -0.5
CCDC47-206ENST00000584112 ZNF507Q8TCN5 953 aa11.93□□□□□ -0.5
CCDC47-206ENST00000584112 ZSWIM3Q96MP5 696 aa11.93□□□□□ -0.5
CCDC47-206ENST00000584112 MTMR12Q9C0I1 747 aa11.93□□□□□ -0.5
CCDC47-206ENST00000584112 ATXN3LQ9H3M9 355 aa11.93□□□□□ -0.5
CCDC47-206ENST00000584112 PDE11AQ9HCR9 933 aa11.93□□□□□ -0.5
CCDC47-206ENST00000584112 GDAP2Q9NXN4 497 aa11.93□□□□□ -0.5
CCDC47-206ENST00000584112 ABI2Q9NYB9 513 aaPredicted RBP11.93□□□□□ -0.5
CCDC47-206ENST00000584112 HSPBP1Q9NZL4 362 aa11.93□□□□□ -0.5
CCDC47-206ENST00000584112 PCDHB5Q9Y5E4 795 aa11.93□□□□□ -0.5
CCDC47-206ENST00000584112 MYO16Q9Y6X6 1858 aa11.92□□□□□ -0.5
CCDC47-206ENST00000584112 HEPACAM2A8MVW5 462 aa11.92□□□□□ -0.5
CCDC47-206ENST00000584112 SPECC1L-ADORA2AF8WAN1 911 aa11.92□□□□□ -0.5
CCDC47-206ENST00000584112 DPYSL4O14531 572 aa11.92□□□□□ -0.5
CCDC47-206ENST00000584112 SOAT2O75908 522 aa11.92□□□□□ -0.5
CCDC47-206ENST00000584112 HAPLN1P10915 354 aaPredicted RBP11.92□□□□□ -0.5
CCDC47-206ENST00000584112 ATF6P18850 670 aa11.92□□□□□ -0.5
CCDC47-206ENST00000584112 IL12RB1P42701 662 aa11.92□□□□□ -0.5
CCDC47-206ENST00000584112 DUOXA2Q1HG44 320 aa11.92□□□□□ -0.5
CCDC47-206ENST00000584112 RESP18Q5W5W9 173 aa11.92□□□□□ -0.5
CCDC47-206ENST00000584112 C1orf228Q6PIY5 440 aa11.92□□□□□ -0.5
CCDC47-206ENST00000584112 GAREM2Q75VX8 874 aa11.92□□□□□ -0.5
CCDC47-206ENST00000584112 EPM2AIP1Q7L775 607 aaPredicted RBP11.92□□□□□ -0.5
CCDC47-206ENST00000584112 HS2ST1Q7LGA3 356 aa11.92□□□□□ -0.5
CCDC47-206ENST00000584112 CEP57L1Q8IYX8 460 aa11.92□□□□□ -0.5
CCDC47-206ENST00000584112 TOP6BLQ8N6T0 577 aa11.92□□□□□ -0.5
CCDC47-206ENST00000584112 LEO1Q8WVC0 666 aaPredicted RBP11.92□□□□□ -0.5
CCDC47-206ENST00000584112 HPS3Q969F9 1004 aa11.92□□□□□ -0.5
CCDC47-206ENST00000584112 LPIN3Q9BQK8 851 aa11.92□□□□□ -0.5
CCDC47-206ENST00000584112 ACBD6Q9BR61 282 aa11.92□□□□□ -0.5
CCDC47-206ENST00000584112 SLC4A5Q9BY07 1137 aa11.92□□□□□ -0.5
CCDC47-206ENST00000584112 TMEM74BQ9NUR3 256 aa11.92□□□□□ -0.5
CCDC47-206ENST00000584112 INTS13Q9NVM9 706 aa11.92□□□□□ -0.5
CCDC47-206ENST00000584112 OBP2AQ9NY56 170 aa11.92□□□□□ -0.5
CCDC47-206ENST00000584112 CGNQ9P2M7 1197 aaKnown RBP11.92□□□□□ -0.5
CCDC47-206ENST00000584112 PCDHA7Q9UN72 937 aa11.92□□□□□ -0.5
CCDC47-206ENST00000584112 L1RE1Q9UN81 338 aa11.92□□□□□ -0.5
CCDC47-206ENST00000584112 SNX9Q9Y5X1 595 aa11.92□□□□□ -0.5
CCDC47-206ENST00000584112 ATXN2Q99700 1313 aaKnown RBP11.91□□□□□ -0.5
CCDC47-206ENST00000584112 PVALEFA0A1B0GWK0 134 aa11.91□□□□□ -0.5
CCDC47-206ENST00000584112 CHADO15335 359 aa11.91□□□□□ -0.5
CCDC47-206ENST00000584112 PRPF40AO75400 957 aaKnown RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms