RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-231ENST00000584063 TRIM50Q86XT4 487 aa12.13□□□□□ -0.47
CDK5RAP3-231ENST00000584063 PGBD3Q8N328 593 aa12.13□□□□□ -0.47
CDK5RAP3-231ENST00000584063 GOT1L1Q8NHS2 421 aaPredicted RBP12.13□□□□□ -0.47
CDK5RAP3-231ENST00000584063 RBM14Q96PK6 669 aaKnown RBP12.13□□□□□ -0.47
CDK5RAP3-231ENST00000584063 MMP19Q99542 508 aa12.13□□□□□ -0.47
CDK5RAP3-231ENST00000584063 C11orf70Q9BRQ4 267 aa12.13□□□□□ -0.47
CDK5RAP3-231ENST00000584063 NMRK2Q9NPI5 230 aa12.13□□□□□ -0.47
CDK5RAP3-231ENST00000584063 FBXO40Q9UH90 709 aa12.13□□□□□ -0.47
CDK5RAP3-231ENST00000584063 ANAPC5Q9UJX4 755 aa12.13□□□□□ -0.47
CDK5RAP3-231ENST00000584063 PDHXO00330 501 aa12.13□□□□□ -0.47
CDK5RAP3-231ENST00000584063 ASAP2O43150 1006 aa12.13□□□□□ -0.47
CDK5RAP3-231ENST00000584063 GGPS1O95749 300 aa12.13□□□□□ -0.47
CDK5RAP3-231ENST00000584063 SFNP31947 248 aa12.13□□□□□ -0.47
CDK5RAP3-231ENST00000584063 FOXN2P32314 431 aa12.13□□□□□ -0.47
CDK5RAP3-231ENST00000584063 SEPHS1P49903 392 aa12.13□□□□□ -0.47
CDK5RAP3-231ENST00000584063 AP2B1P63010 937 aa12.13□□□□□ -0.47
CDK5RAP3-231ENST00000584063 DMP1Q13316 513 aaPredicted RBP12.13□□□□□ -0.47
CDK5RAP3-231ENST00000584063 SP140Q13342 867 aa12.13□□□□□ -0.47
CDK5RAP3-231ENST00000584063 MAP4K3Q8IVH8 894 aa12.13□□□□□ -0.47
CDK5RAP3-231ENST00000584063 C4orf19Q8IY42 314 aa12.13□□□□□ -0.47
CDK5RAP3-231ENST00000584063 BRSK1Q8TDC3 778 aa12.13□□□□□ -0.47
CDK5RAP3-231ENST00000584063 ATP6V0A1Q93050 837 aa12.13□□□□□ -0.47
CDK5RAP3-231ENST00000584063 PPP1R14BQ96C90 147 aa12.13□□□□□ -0.47
CDK5RAP3-231ENST00000584063 CAPN10Q9HC96 672 aa12.13□□□□□ -0.47
CDK5RAP3-231ENST00000584063 NAALADL1Q9UQQ1 740 aa12.13□□□□□ -0.47
CDK5RAP3-231ENST00000584063 COL11A1P12107 1806 aaPredicted RBP12.13□□□□□ -0.47
CDK5RAP3-231ENST00000584063 NOP56O00567 594 aaKnown RBP12.13□□□□□ -0.47
CDK5RAP3-231ENST00000584063 STBD1O95210 358 aa12.13□□□□□ -0.47
CDK5RAP3-231ENST00000584063 MAPTP10636 758 aaKnown RBP12.13□□□□□ -0.47
CDK5RAP3-231ENST00000584063 NQO1P15559 274 aaKnown RBP12.13□□□□□ -0.47
CDK5RAP3-231ENST00000584063 PDE6CP51160 858 aa12.13□□□□□ -0.47
CDK5RAP3-231ENST00000584063 CYP24A1Q07973 514 aa12.13□□□□□ -0.47
CDK5RAP3-231ENST00000584063 WLSQ5T9L3 541 aa12.13□□□□□ -0.47
CDK5RAP3-231ENST00000584063 TRIM68Q6AZZ1 485 aa12.13□□□□□ -0.47
CDK5RAP3-231ENST00000584063 CGB2Q6NT52 195 aa12.13□□□□□ -0.47
CDK5RAP3-231ENST00000584063 C11orf63Q6NUN7 778 aa12.13□□□□□ -0.47
CDK5RAP3-231ENST00000584063 TRIML2Q8N7C3 387 aa12.13□□□□□ -0.47
CDK5RAP3-231ENST00000584063 FBXL13Q8NEE6 735 aa12.13□□□□□ -0.47
CDK5RAP3-231ENST00000584063 COPS5Q92905 334 aa12.13□□□□□ -0.47
CDK5RAP3-231ENST00000584063 NT5C1BQ96P26 610 aa12.13□□□□□ -0.47
CDK5RAP3-231ENST00000584063 KLF6Q99612 283 aaPredicted RBP12.13□□□□□ -0.47
CDK5RAP3-231ENST00000584063 WNT8AQ9H1J5 351 aa12.13□□□□□ -0.47
CDK5RAP3-231ENST00000584063 NINJ2Q9NZG7 142 aa12.13□□□□□ -0.47
CDK5RAP3-231ENST00000584063 SPATA31C2B4DYI2 1134 aa12.12□□□□□ -0.47
CDK5RAP3-231ENST00000584063 NBNO60934 754 aa12.12□□□□□ -0.47
CDK5RAP3-231ENST00000584063 UBA1P22314 1058 aaKnown RBP12.12□□□□□ -0.47
CDK5RAP3-231ENST00000584063 TARSP26639 723 aaKnown RBP12.12□□□□□ -0.47
CDK5RAP3-231ENST00000584063 TCF7P36402 384 aaPredicted RBP12.12□□□□□ -0.47
CDK5RAP3-231ENST00000584063 POLGP54098 1239 aaPredicted RBP12.12□□□□□ -0.47
CDK5RAP3-231ENST00000584063 TAS2R40P59535 323 aa12.12□□□□□ -0.47
CDK5RAP3-231ENST00000584063 CDR2Q01850 454 aa12.12□□□□□ -0.47
CDK5RAP3-231ENST00000584063 GHRHRQ02643 423 aa12.12□□□□□ -0.47
CDK5RAP3-231ENST00000584063 BTG3Q14201 252 aaPredicted RBP12.12□□□□□ -0.47
CDK5RAP3-231ENST00000584063 CRY1Q16526 586 aa12.12□□□□□ -0.47
CDK5RAP3-231ENST00000584063 WDR44Q5JSH3 913 aa12.12□□□□□ -0.47
CDK5RAP3-231ENST00000584063 ARHGEF18Q6ZSZ5 1173 aa12.12□□□□□ -0.47
CDK5RAP3-231ENST00000584063 MAELQ96JY0 434 aaKnown RBP12.12□□□□□ -0.47
CDK5RAP3-231ENST00000584063 POLR3FQ9H1D9 316 aaPredicted RBP12.12□□□□□ -0.47
CDK5RAP3-231ENST00000584063 TCF7L2Q9NQB0 619 aa12.12□□□□□ -0.47
CDK5RAP3-231ENST00000584063 PDGFCQ9NRA1 345 aa12.12□□□□□ -0.47
CDK5RAP3-231ENST00000584063 HOMER3Q9NSC5 361 aa12.12□□□□□ -0.47
CDK5RAP3-231ENST00000584063 ANKFY1Q9P2R3 1169 aa12.12□□□□□ -0.47
CDK5RAP3-231ENST00000584063 SAE1Q9UBE0 346 aaPredicted RBP12.12□□□□□ -0.47
CDK5RAP3-231ENST00000584063 MROH7Q68CQ1 1323 aa12.12□□□□□ -0.47
CDK5RAP3-231ENST00000584063 ZNFX1Q9P2E3 1918 aaKnown RBP12.12□□□□□ -0.47
CDK5RAP3-231ENST00000584063 GOLGA8RI6L899 631 aa12.12□□□□□ -0.47
CDK5RAP3-231ENST00000584063 IFNB1P01574 187 aa12.12□□□□□ -0.47
CDK5RAP3-231ENST00000584063 ATF2P15336 505 aa12.12□□□□□ -0.47
CDK5RAP3-231ENST00000584063 MUTP22033 750 aa12.12□□□□□ -0.47
CDK5RAP3-231ENST00000584063 HSD3B2P26439 372 aa12.12□□□□□ -0.47
CDK5RAP3-231ENST00000584063 MFAP3P55082 362 aa12.12□□□□□ -0.47
CDK5RAP3-231ENST00000584063 MIS18BP1Q6P0N0 1132 aa12.12□□□□□ -0.47
CDK5RAP3-231ENST00000584063 GRAMD2AQ8IUY3 354 aa12.12□□□□□ -0.47
CDK5RAP3-231ENST00000584063 PSPC1Q8WXF1 523 aaKnown RBP12.12□□□□□ -0.47
CDK5RAP3-231ENST00000584063 NSRP1Q9H0G5 558 aaKnown RBP12.12□□□□□ -0.47
CDK5RAP3-231ENST00000584063 ETNK1Q9HBU6 452 aa12.12□□□□□ -0.47
CDK5RAP3-231ENST00000584063 GBA2Q9HCG7 927 aaPredicted RBP12.12□□□□□ -0.47
CDK5RAP3-231ENST00000584063 ZNF302Q9NR11 478 aa12.12□□□□□ -0.47
CDK5RAP3-231ENST00000584063 PHIPQ8WWQ0 1821 aa12.11□□□□□ -0.47
CDK5RAP3-231ENST00000584063 CNMDO75829 334 aa12.11□□□□□ -0.47
CDK5RAP3-231ENST00000584063 GAD2Q05329 585 aa12.11□□□□□ -0.47
CDK5RAP3-231ENST00000584063 HSDL1Q3SXM5 330 aa12.11□□□□□ -0.47
CDK5RAP3-231ENST00000584063 XRRA1Q6P2D8 792 aa12.11□□□□□ -0.47
CDK5RAP3-231ENST00000584063 ANKMY2Q8IV38 441 aa12.11□□□□□ -0.47
CDK5RAP3-231ENST00000584063 C12orf56Q8IXR9 622 aa12.11□□□□□ -0.47
CDK5RAP3-231ENST00000584063 C2orf69Q8N8R5 385 aa12.11□□□□□ -0.47
CDK5RAP3-231ENST00000584063 APOBEC3GQ9HC16 384 aaKnown RBP12.11□□□□□ -0.47
CDK5RAP3-231ENST00000584063 TMEM8AQ9HCN3 771 aa12.11□□□□□ -0.47
CDK5RAP3-231ENST00000584063 HAO1Q9UJM8 370 aa12.11□□□□□ -0.47
CDK5RAP3-231ENST00000584063 GNEQ9Y223 722 aaKnown RBP12.11□□□□□ -0.47
CDK5RAP3-231ENST00000584063 MYPNQ86TC9 1320 aa12.11□□□□□ -0.47
CDK5RAP3-231ENST00000584063 SRRM3A6NNA2 597 aaPredicted RBP12.11□□□□□ -0.47
CDK5RAP3-231ENST00000584063 BTBD19C9JJ37 291 aa12.11□□□□□ -0.47
CDK5RAP3-231ENST00000584063 SUN1O94901 812 aa12.11□□□□□ -0.47
CDK5RAP3-231ENST00000584063 TTC4O95801 387 aa12.11□□□□□ -0.47
CDK5RAP3-231ENST00000584063 TNNI1P19237 187 aa12.11□□□□□ -0.47
CDK5RAP3-231ENST00000584063 DRG2P55039 364 aaKnown RBP12.11□□□□□ -0.47
CDK5RAP3-231ENST00000584063 NOP14P78316 857 aaKnown RBP12.11□□□□□ -0.47
CDK5RAP3-231ENST00000584063 MLLT1Q03111 559 aaPredicted RBP12.11□□□□□ -0.47
CDK5RAP3-231ENST00000584063 P3H1Q32P28 736 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms