RNA–Protein interactions for RNA: ENST00000583800.1

SMCHD1-210, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-210ENST00000583800 CRELD2Q6UXH1 353 aaPredicted RBP8.38□□□□□ -1.07
SMCHD1-210ENST00000583800 ZNF662Q6ZS27 426 aa8.38□□□□□ -1.07
SMCHD1-210ENST00000583800 DCP1BQ8IZD4 617 aaKnown RBP8.38□□□□□ -1.07
SMCHD1-210ENST00000583800 TMEM151AQ8N4L1 468 aa8.38□□□□□ -1.07
SMCHD1-210ENST00000583800 TTC16Q8NEE8 873 aa8.38□□□□□ -1.07
SMCHD1-210ENST00000583800 RASSF8Q8NHQ8 419 aa8.38□□□□□ -1.07
SMCHD1-210ENST00000583800 MRPS31Q92665 395 aaKnown RBP8.38□□□□□ -1.07
SMCHD1-210ENST00000583800 TCEAL3Q969E4 200 aa8.38□□□□□ -1.07
SMCHD1-210ENST00000583800 LOXL4Q96JB6 756 aa8.38□□□□□ -1.07
SMCHD1-210ENST00000583800 FAM84AQ96KN4 292 aa8.38□□□□□ -1.07
SMCHD1-210ENST00000583800 AK8Q96MA6 479 aa8.38□□□□□ -1.07
SMCHD1-210ENST00000583800 ZNF560Q96MR9 790 aa8.38□□□□□ -1.07
SMCHD1-210ENST00000583800 CCSER1Q9C0I3 900 aa8.38□□□□□ -1.07
SMCHD1-210ENST00000583800 KIF9Q9HAQ2 790 aa8.38□□□□□ -1.07
SMCHD1-210ENST00000583800 TDP1Q9NUW8 608 aa8.38□□□□□ -1.07
SMCHD1-210ENST00000583800 ANGPTL2Q9UKU9 493 aa8.38□□□□□ -1.07
SMCHD1-210ENST00000583800 AGO2Q9UKV8 859 aaKnown RBP8.38□□□□□ -1.07
SMCHD1-210ENST00000583800 KIF3AQ9Y496 699 aa8.38□□□□□ -1.07
SMCHD1-210ENST00000583800 PCDHB5Q9Y5E4 795 aa8.38□□□□□ -1.07
SMCHD1-210ENST00000583800 CEP192Q8TEP8 1941 aa8.38□□□□□ -1.07
SMCHD1-210ENST00000583800 TM4SF5O14894 197 aa8.37□□□□□ -1.07
SMCHD1-210ENST00000583800 DCLK1O15075 740 aa8.37□□□□□ -1.07
SMCHD1-210ENST00000583800 SLC26A4O43511 780 aa8.37□□□□□ -1.07
SMCHD1-210ENST00000583800 HCRTO43612 131 aa8.37□□□□□ -1.07
SMCHD1-210ENST00000583800 CSH1P0DML2 217 aa8.37□□□□□ -1.07
SMCHD1-210ENST00000583800 CSH2P0DML3 217 aa8.37□□□□□ -1.07
SMCHD1-210ENST00000583800 SCP2P22307 547 aa8.37□□□□□ -1.07
SMCHD1-210ENST00000583800 ADSSP30520 456 aa8.37□□□□□ -1.07
SMCHD1-210ENST00000583800 POLR2BP30876 1174 aaKnown RBP8.37□□□□□ -1.07
SMCHD1-210ENST00000583800 GJA4P35212 333 aa8.37□□□□□ -1.07
SMCHD1-210ENST00000583800 PI4KAP42356 2102 aa8.37□□□□□ -1.07
SMCHD1-210ENST00000583800 GALK1P51570 392 aa8.37□□□□□ -1.07
SMCHD1-210ENST00000583800 FANCCQ00597 558 aa8.37□□□□□ -1.07
SMCHD1-210ENST00000583800 TSPY1Q01534 308 aa8.37□□□□□ -1.07
SMCHD1-210ENST00000583800 USP4Q13107 963 aa8.37□□□□□ -1.07
SMCHD1-210ENST00000583800 MTF1Q14872 753 aa8.37□□□□□ -1.07
SMCHD1-210ENST00000583800 ZNF77Q15935 545 aa8.37□□□□□ -1.07
SMCHD1-210ENST00000583800 DDR2Q16832 855 aa8.37□□□□□ -1.07
SMCHD1-210ENST00000583800 PLK5Q496M5 336 aa8.37□□□□□ -1.07
SMCHD1-210ENST00000583800 SLFN12LQ6IEE8 588 aa8.37□□□□□ -1.07
SMCHD1-210ENST00000583800 CC2D1AQ6P1N0 951 aaPredicted RBP8.37□□□□□ -1.07
SMCHD1-210ENST00000583800 MON1AQ86VX9 555 aa8.37□□□□□ -1.07
SMCHD1-210ENST00000583800 SFR1Q86XK3 245 aa8.37□□□□□ -1.07
SMCHD1-210ENST00000583800 PDCL2Q8N4E4 241 aa8.37□□□□□ -1.07
SMCHD1-210ENST00000583800 ZSWIM2Q8NEG5 633 aa8.37□□□□□ -1.07
SMCHD1-210ENST00000583800 RPLP0P6Q8NHW5 317 aa8.37□□□□□ -1.07
SMCHD1-210ENST00000583800 POMGNT1Q8WZA1 660 aa8.37□□□□□ -1.07
SMCHD1-210ENST00000583800 LARP4BQ92615 738 aaKnown RBP8.37□□□□□ -1.07
SMCHD1-210ENST00000583800 EZH1Q92800 747 aaPredicted RBP8.37□□□□□ -1.07
SMCHD1-210ENST00000583800 RNF34Q969K3 372 aa8.37□□□□□ -1.07
SMCHD1-210ENST00000583800 SAAL1Q96ER3 474 aa8.37□□□□□ -1.07
SMCHD1-210ENST00000583800 CITED4Q96RK1 184 aa8.37□□□□□ -1.07
SMCHD1-210ENST00000583800 SLC22A12Q96S37 553 aa8.37□□□□□ -1.07
SMCHD1-210ENST00000583800 P2RY13Q9BPV8 354 aa8.37□□□□□ -1.07
SMCHD1-210ENST00000583800 DUSP15Q9H1R2 295 aaPredicted RBP8.37□□□□□ -1.07
SMCHD1-210ENST00000583800 ECT2Q9H8V3 914 aa8.37□□□□□ -1.07
SMCHD1-210ENST00000583800 TRPC7Q9HCX4 862 aa8.37□□□□□ -1.07
SMCHD1-210ENST00000583800 ZMYM5Q9UJ78 669 aa8.37□□□□□ -1.07
SMCHD1-210ENST00000583800 L1RE1Q9UN81 338 aa8.37□□□□□ -1.07
SMCHD1-210ENST00000583800 PCDHGA5Q9Y5G8 931 aa8.37□□□□□ -1.07
SMCHD1-210ENST00000583800 WNT6Q9Y6F9 365 aa8.37□□□□□ -1.07
SMCHD1-210ENST00000583800 STYXL1Q9Y6J8 313 aa8.37□□□□□ -1.07
SMCHD1-210ENST00000583800 MYO18AQ92614 2054 aaKnown RBP8.37□□□□□ -1.07
SMCHD1-210ENST00000583800 CFAP47Q6ZTR5 3102 aa8.37□□□□□ -1.07
SMCHD1-210ENST00000583800 ADAMTS9Q9P2N4 1935 aa8.37□□□□□ -1.07
SMCHD1-210ENST00000583800 ASCC3Q8N3C0 2202 aaKnown RBP8.36□□□□□ -1.07
SMCHD1-210ENST00000583800 ANTXRLA6NF34 631 aa8.36□□□□□ -1.07
SMCHD1-210ENST00000583800 AKAP3O75969 853 aa8.36□□□□□ -1.07
SMCHD1-210ENST00000583800 NOL4O94818 638 aa8.36□□□□□ -1.07
SMCHD1-210ENST00000583800 KCNK5O95279 499 aa8.36□□□□□ -1.07
SMCHD1-210ENST00000583800 ADH1CP00326 375 aa8.36□□□□□ -1.07
SMCHD1-210ENST00000583800 ITGB3P05106 788 aa8.36□□□□□ -1.07
SMCHD1-210ENST00000583800 DRD1P21728 446 aa8.36□□□□□ -1.07
SMCHD1-210ENST00000583800 CYP2F1P24903 491 aa8.36□□□□□ -1.07
SMCHD1-210ENST00000583800 VARSP26640 1264 aaKnown RBP8.36□□□□□ -1.07
SMCHD1-210ENST00000583800 ABCD1P33897 745 aa8.36□□□□□ -1.07
SMCHD1-210ENST00000583800 IFNAR2P48551 515 aa8.36□□□□□ -1.07
SMCHD1-210ENST00000583800 WDR4P57081 412 aaKnown RBP8.36□□□□□ -1.07
SMCHD1-210ENST00000583800 TFAMQ00059 246 aaKnown RBP8.36□□□□□ -1.07
SMCHD1-210ENST00000583800 AMPD2Q01433 879 aa8.36□□□□□ -1.07
SMCHD1-210ENST00000583800 CREB5Q02930 508 aa8.36□□□□□ -1.07
SMCHD1-210ENST00000583800 FAM160A1Q05DH4 1040 aa8.36□□□□□ -1.07
SMCHD1-210ENST00000583800 PSMD2Q13200 908 aa8.36□□□□□ -1.07
SMCHD1-210ENST00000583800 DMC1Q14565 340 aa8.36□□□□□ -1.07
SMCHD1-210ENST00000583800 ZNF268Q14587 947 aaPredicted RBP8.36□□□□□ -1.07
SMCHD1-210ENST00000583800 NAA30Q147X3 362 aaPredicted RBP8.36□□□□□ -1.07
SMCHD1-210ENST00000583800 PDGFRLQ15198 375 aa8.36□□□□□ -1.07
SMCHD1-210ENST00000583800 NFE2Q16621 373 aaPredicted RBP8.36□□□□□ -1.07
SMCHD1-210ENST00000583800 INTS6LQ5JSJ4 861 aaKnown RBP8.36□□□□□ -1.07
SMCHD1-210ENST00000583800 RNF43Q68DV7 783 aa8.36□□□□□ -1.07
SMCHD1-210ENST00000583800 PSAPL1Q6NUJ1 521 aa8.36□□□□□ -1.07
SMCHD1-210ENST00000583800 DYMQ7RTS9 669 aa8.36□□□□□ -1.07
SMCHD1-210ENST00000583800 OSTM1Q86WC4 334 aa8.36□□□□□ -1.07
SMCHD1-210ENST00000583800 CPA6Q8N4T0 437 aa8.36□□□□□ -1.07
SMCHD1-210ENST00000583800 CAMKK1Q8N5S9 505 aa8.36□□□□□ -1.07
SMCHD1-210ENST00000583800 C1orf127Q8N9H9 656 aa8.36□□□□□ -1.07
SMCHD1-210ENST00000583800 TSEN2Q8NCE0 465 aaKnown RBP8.36□□□□□ -1.07
SMCHD1-210ENST00000583800 LEO1Q8WVC0 666 aaPredicted RBP8.36□□□□□ -1.07
SMCHD1-210ENST00000583800 OSCP1Q8WVF1 389 aa8.36□□□□□ -1.07
SMCHD1-210ENST00000583800 FOXJ1Q92949 421 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms