RNA–Protein interactions for RNA: ENST00000583593.2

CCDC57-218, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-218ENST00000583593 ANXA13P27216 316 aa14.36□□□□□ -0.11
CCDC57-218ENST00000583593 NOVA1P51513 510 aaKnown RBP14.36□□□□□ -0.11
CCDC57-218ENST00000583593 IRX4P78413 519 aa14.36□□□□□ -0.11
CCDC57-218ENST00000583593 MRPS21P82921 87 aaKnown RBP14.36□□□□□ -0.11
CCDC57-218ENST00000583593 TAF10Q12962 218 aa14.36□□□□□ -0.11
CCDC57-218ENST00000583593 SURF1Q15526 300 aa14.36□□□□□ -0.11
CCDC57-218ENST00000583593 EPM2AIP1Q7L775 607 aaPredicted RBP14.36□□□□□ -0.11
CCDC57-218ENST00000583593 C11orf74Q86VG3 221 aa14.36□□□□□ -0.11
CCDC57-218ENST00000583593 CCDC65Q8IXS2 484 aa14.36□□□□□ -0.11
CCDC57-218ENST00000583593 ALLCQ8N6M5 410 aa14.36□□□□□ -0.11
CCDC57-218ENST00000583593 PDILTQ8N807 584 aa14.36□□□□□ -0.11
CCDC57-218ENST00000583593 FRMD1Q8N878 549 aa14.36□□□□□ -0.11
CCDC57-218ENST00000583593 KIAA1958Q8N8K9 716 aa14.36□□□□□ -0.11
CCDC57-218ENST00000583593 IL17RCQ8NAC3 791 aa14.36□□□□□ -0.11
CCDC57-218ENST00000583593 TXNDC5Q8NBS9 432 aaKnown RBP14.36□□□□□ -0.11
CCDC57-218ENST00000583593 GZF1Q9H116 711 aaPredicted RBP14.36□□□□□ -0.11
CCDC57-218ENST00000583593 DPEP3Q9H4B8 488 aa14.36□□□□□ -0.11
CCDC57-218ENST00000583593 SMPD4Q9NXE4 827 aa14.36□□□□□ -0.11
CCDC57-218ENST00000583593 RALYQ9UKM9 306 aaKnown RBP14.36□□□□□ -0.11
CCDC57-218ENST00000583593 R3HCC1Q9Y3T6 440 aaKnown RBP14.36□□□□□ -0.11
CCDC57-218ENST00000583593 AKAP13Q12802 2813 aa14.36□□□□□ -0.11
CCDC57-218ENST00000583593 PLXND1Q9Y4D7 1925 aa14.35□□□□□ -0.11
CCDC57-218ENST00000583593 C1QTNF9BB2RNN3 333 aa14.35□□□□□ -0.11
CCDC57-218ENST00000583593 TOP3BO95985 862 aaKnown RBP14.35□□□□□ -0.11
CCDC57-218ENST00000583593 PROS1P07225 676 aa14.35□□□□□ -0.11
CCDC57-218ENST00000583593 C1QTNF9P0C862 333 aa14.35□□□□□ -0.11
CCDC57-218ENST00000583593 PTPN1P18031 435 aaKnown RBP14.35□□□□□ -0.11
CCDC57-218ENST00000583593 PDCP20941 246 aa14.35□□□□□ -0.11
CCDC57-218ENST00000583593 GNL1P36915 607 aaPredicted RBP14.35□□□□□ -0.11
CCDC57-218ENST00000583593 P2RY2P41231 377 aa14.35□□□□□ -0.11
CCDC57-218ENST00000583593 KIR2DL1P43626 348 aaPredicted RBP14.35□□□□□ -0.11
CCDC57-218ENST00000583593 PPP3CCP48454 512 aa14.35□□□□□ -0.11
CCDC57-218ENST00000583593 E2F4Q16254 413 aa14.35□□□□□ -0.11
CCDC57-218ENST00000583593 SH3PXD2AQ5TCZ1 1133 aa14.35□□□□□ -0.11
CCDC57-218ENST00000583593 DAB2IPQ5VWQ8 1189 aa14.35□□□□□ -0.11
CCDC57-218ENST00000583593 HS2ST1Q7LGA3 356 aa14.35□□□□□ -0.11
CCDC57-218ENST00000583593 CYP2U1Q7Z449 544 aa14.35□□□□□ -0.11
CCDC57-218ENST00000583593 PHTF2Q8N3S3 785 aa14.35□□□□□ -0.11
CCDC57-218ENST00000583593 RDH13Q8NBN7 331 aa14.35□□□□□ -0.11
CCDC57-218ENST00000583593 OR6B3Q8NGW1 331 aa14.35□□□□□ -0.11
CCDC57-218ENST00000583593 ZNF507Q8TCN5 953 aa14.35□□□□□ -0.11
CCDC57-218ENST00000583593 RLN3Q8WXF3 142 aa14.35□□□□□ -0.11
CCDC57-218ENST00000583593 ZNF516Q92618 1163 aa14.35□□□□□ -0.11
CCDC57-218ENST00000583593 ZFRQ96KR1 1074 aaKnown RBP14.35□□□□□ -0.11
CCDC57-218ENST00000583593 FNBP1Q96RU3 617 aa14.35□□□□□ -0.11
CCDC57-218ENST00000583593 PNKPQ96T60 521 aa14.35□□□□□ -0.11
CCDC57-218ENST00000583593 TMEM121BQ9BXQ6 578 aaPredicted RBP14.35□□□□□ -0.11
CCDC57-218ENST00000583593 B3GNT5Q9BYG0 378 aa14.35□□□□□ -0.11
CCDC57-218ENST00000583593 ZNF518BQ9C0D4 1074 aa14.35□□□□□ -0.11
CCDC57-218ENST00000583593 ZDHHC4Q9NPG8 344 aa14.35□□□□□ -0.11
CCDC57-218ENST00000583593 KBTBD4Q9NVX7 518 aa14.35□□□□□ -0.11
CCDC57-218ENST00000583593 MYO18AQ92614 2054 aaKnown RBP14.34□□□□□ -0.11
CCDC57-218ENST00000583593 CLDN5O00501 218 aa14.34□□□□□ -0.11
CCDC57-218ENST00000583593 ADAM23O75077 832 aa14.34□□□□□ -0.11
CCDC57-218ENST00000583593 KAT7O95251 611 aa14.34□□□□□ -0.11
CCDC57-218ENST00000583593 KLF8O95600 359 aaPredicted RBP14.34□□□□□ -0.11
CCDC57-218ENST00000583593 ABL1P00519 1130 aa14.34□□□□□ -0.11
CCDC57-218ENST00000583593 FAM163BP0C2L3 166 aa14.34□□□□□ -0.11
CCDC57-218ENST00000583593 DLATP10515 647 aaKnown RBP14.34□□□□□ -0.11
CCDC57-218ENST00000583593 SPINK2P20155 84 aa14.34□□□□□ -0.11
CCDC57-218ENST00000583593 TIE1P35590 1138 aa14.34□□□□□ -0.11
CCDC57-218ENST00000583593 EIF2DP41214 584 aaKnown RBP14.34□□□□□ -0.11
CCDC57-218ENST00000583593 DHPSP49366 369 aaPredicted RBP14.34□□□□□ -0.11
CCDC57-218ENST00000583593 ZNF252P-AS1Q0IIN9 211 aa14.34□□□□□ -0.11
CCDC57-218ENST00000583593 PSMD6Q15008 389 aa14.34□□□□□ -0.11
CCDC57-218ENST00000583593 SNRNP35Q16560 246 aaKnown RBP14.34□□□□□ -0.11
CCDC57-218ENST00000583593 TDRD10Q5VZ19 366 aaKnown RBP14.34□□□□□ -0.11
CCDC57-218ENST00000583593 TTC30AQ86WT1 665 aa14.34□□□□□ -0.11
CCDC57-218ENST00000583593 PIGKQ92643 395 aa14.34□□□□□ -0.11
CCDC57-218ENST00000583593 TRIM9Q9C026 710 aa14.34□□□□□ -0.11
CCDC57-218ENST00000583593 TNMDQ9H2S6 317 aa14.34□□□□□ -0.11
CCDC57-218ENST00000583593 UPF2Q9HAU5 1272 aaKnown RBP14.34□□□□□ -0.11
CCDC57-218ENST00000583593 KIAA1586Q9HCI6 787 aa14.34□□□□□ -0.11
CCDC57-218ENST00000583593 TMEM9BQ9NQ34 198 aa14.34□□□□□ -0.11
CCDC57-218ENST00000583593 AGPAT3Q9NRZ7 376 aa14.34□□□□□ -0.11
CCDC57-218ENST00000583593 TMEM74BQ9NUR3 256 aa14.34□□□□□ -0.11
CCDC57-218ENST00000583593 EHD2Q9NZN4 543 aa14.34□□□□□ -0.11
CCDC57-218ENST00000583593 CFAP97Q9P2B7 532 aa14.34□□□□□ -0.11
CCDC57-218ENST00000583593 MBD1Q9UIS9 605 aaPredicted RBP14.34□□□□□ -0.11
CCDC57-218ENST00000583593 MTMR6Q9Y217 621 aa14.34□□□□□ -0.11
CCDC57-218ENST00000583593 ASCC3Q8N3C0 2202 aaKnown RBP14.34□□□□□ -0.11
CCDC57-218ENST00000583593 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.33□□□□□ -0.12
CCDC57-218ENST00000583593 SLC9A3R1O14745 358 aaPredicted RBP14.33□□□□□ -0.12
CCDC57-218ENST00000583593 CLIC2O15247 247 aa14.33□□□□□ -0.12
CCDC57-218ENST00000583593 EIF3DO15371 548 aaKnown RBP eCLIP14.33□□□□□ -0.12
CCDC57-218ENST00000583593 CEACAM1P13688 526 aa14.33□□□□□ -0.12
CCDC57-218ENST00000583593 TNNI1P19237 187 aa14.33□□□□□ -0.12
CCDC57-218ENST00000583593 CSRP1P21291 193 aaKnown RBP14.33□□□□□ -0.12
CCDC57-218ENST00000583593 NASPP49321 788 aaPredicted RBP14.33□□□□□ -0.12
CCDC57-218ENST00000583593 IFRD2Q12894 506 aaPredicted RBP14.33□□□□□ -0.12
CCDC57-218ENST00000583593 FOXC1Q12948 553 aa14.33□□□□□ -0.12
CCDC57-218ENST00000583593 MAP7D1Q3KQU3 841 aa14.33□□□□□ -0.12
CCDC57-218ENST00000583593 WDR72Q3MJ13 1102 aa14.33□□□□□ -0.12
CCDC57-218ENST00000583593 UNQ6494/PRO21346Q6UXR6 183 aa14.33□□□□□ -0.12
CCDC57-218ENST00000583593 PAQR9Q6ZVX9 377 aa14.33□□□□□ -0.12
CCDC57-218ENST00000583593 STXBP4Q6ZWJ1 553 aa14.33□□□□□ -0.12
CCDC57-218ENST00000583593 TMEFF1Q8IYR6 380 aa14.33□□□□□ -0.12
CCDC57-218ENST00000583593 CCDC127Q96BQ5 260 aa14.33□□□□□ -0.12
CCDC57-218ENST00000583593 KCNK16Q96T55 309 aa14.33□□□□□ -0.12
CCDC57-218ENST00000583593 CGRRF1Q99675 332 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms