RNA–Protein interactions for RNA: ENST00000583475.1

VAPA-206, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-206ENST00000583475 CYP4F2P78329 520 aa4.4□□□□□ -1.71
VAPA-206ENST00000583475 CYP1B1Q16678 543 aa4.4□□□□□ -1.71
VAPA-206ENST00000583475 TBC1D25Q3MII6 688 aa4.4□□□□□ -1.71
VAPA-206ENST00000583475 CERCAMQ5T4B2 595 aa4.4□□□□□ -1.71
VAPA-206ENST00000583475 FCRL6Q6DN72 434 aa4.4□□□□□ -1.71
VAPA-206ENST00000583475 SLC29A4Q7RTT9 530 aa4.4□□□□□ -1.71
VAPA-206ENST00000583475 SPARTQ8N0X7 666 aa4.4□□□□□ -1.71
VAPA-206ENST00000583475 SEMA6DQ8NFY4 1073 aa4.4□□□□□ -1.71
VAPA-206ENST00000583475 DNAJB14Q8TBM8 379 aa4.4□□□□□ -1.71
VAPA-206ENST00000583475 HASPINQ8TF76 798 aa4.4□□□□□ -1.71
VAPA-206ENST00000583475 PHKBQ93100 1093 aa4.4□□□□□ -1.71
VAPA-206ENST00000583475 MACROD1Q9BQ69 325 aa4.4□□□□□ -1.71
VAPA-206ENST00000583475 APOL5Q9BWW9 433 aa4.4□□□□□ -1.71
VAPA-206ENST00000583475 DHX36Q9H2U1 1008 aaKnown RBP4.4□□□□□ -1.71
VAPA-206ENST00000583475 ADAMTS5Q9UNA0 930 aa4.4□□□□□ -1.71
VAPA-206ENST00000583475 CGB1A6NKQ9 187 aa4.39□□□□□ -1.71
VAPA-206ENST00000583475 CD3EAPO15446 510 aaKnown RBP4.39□□□□□ -1.71
VAPA-206ENST00000583475 RRP9O43818 475 aaKnown RBP4.39□□□□□ -1.71
VAPA-206ENST00000583475 PRKCGP05129 697 aa4.39□□□□□ -1.71
VAPA-206ENST00000583475 PRKCBP05771 671 aa4.39□□□□□ -1.71
VAPA-206ENST00000583475 TXNP10599 105 aaKnown RBP4.39□□□□□ -1.71
VAPA-206ENST00000583475 RPL17P18621 184 aaKnown RBP4.39□□□□□ -1.71
VAPA-206ENST00000583475 PRKAR1BP31321 381 aa4.39□□□□□ -1.71
VAPA-206ENST00000583475 UQCRC1P31930 480 aa4.39□□□□□ -1.71
VAPA-206ENST00000583475 PTDSS1P48651 473 aaKnown RBP4.39□□□□□ -1.71
VAPA-206ENST00000583475 HTRA4P83105 476 aaPredicted RBP4.39□□□□□ -1.71
VAPA-206ENST00000583475 FOXF2Q12947 444 aa4.39□□□□□ -1.71
VAPA-206ENST00000583475 ARHGEF7Q14155 803 aa4.39□□□□□ -1.71
VAPA-206ENST00000583475 SLC29A2Q14542 456 aa4.39□□□□□ -1.71
VAPA-206ENST00000583475 PROSER3Q2NL68 480 aa4.39□□□□□ -1.71
VAPA-206ENST00000583475 ZNF750Q32MQ0 723 aa4.39□□□□□ -1.71
VAPA-206ENST00000583475 PPP4R4Q6NUP7 873 aa4.39□□□□□ -1.71
VAPA-206ENST00000583475 NAPRTQ6XQN6 538 aa4.39□□□□□ -1.71
VAPA-206ENST00000583475 UNC13DQ70J99 1090 aa4.39□□□□□ -1.71
VAPA-206ENST00000583475 PTF1AQ7RTS3 328 aa4.39□□□□□ -1.71
VAPA-206ENST00000583475 KRT78Q8N1N4 520 aa4.39□□□□□ -1.71
VAPA-206ENST00000583475 ABHD11Q8NFV4 315 aa4.39□□□□□ -1.71
VAPA-206ENST00000583475 ZBTB45Q96K62 511 aaPredicted RBP4.39□□□□□ -1.71
VAPA-206ENST00000583475 PRR25Q96S07 402 aa4.39□□□□□ -1.71
VAPA-206ENST00000583475 STRBPQ96SI9 672 aaKnown RBP4.39□□□□□ -1.71
VAPA-206ENST00000583475 DPCDQ9BVM2 203 aaPredicted RBP4.39□□□□□ -1.71
VAPA-206ENST00000583475 BTBD1Q9H0C5 482 aa4.39□□□□□ -1.71
VAPA-206ENST00000583475 NUP62CLQ9H1M0 184 aa4.39□□□□□ -1.71
VAPA-206ENST00000583475 SH3BP4Q9P0V3 963 aa4.39□□□□□ -1.71
VAPA-206ENST00000583475 DKK4Q9UBT3 224 aa4.39□□□□□ -1.71
VAPA-206ENST00000583475 MID2Q9UJV3 735 aa4.39□□□□□ -1.71
VAPA-206ENST00000583475 CCNL1Q9UK58 526 aaPredicted RBP4.39□□□□□ -1.71
VAPA-206ENST00000583475 CACNA1IQ9P0X4 2223 aa4.39□□□□□ -1.71
VAPA-206ENST00000583475 AP4M1O00189 453 aa4.38□□□□□ -1.71
VAPA-206ENST00000583475 RAB27BO00194 218 aa4.38□□□□□ -1.71
VAPA-206ENST00000583475 RGS10O43665 173 aa4.38□□□□□ -1.71
VAPA-206ENST00000583475 SRGAP2O75044 1071 aa4.38□□□□□ -1.71
VAPA-206ENST00000583475 PDE8BO95263 885 aa4.38□□□□□ -1.71
VAPA-206ENST00000583475 RASAL1O95294 804 aa4.38□□□□□ -1.71
VAPA-206ENST00000583475 MT-ND5P03915 603 aa4.38□□□□□ -1.71
VAPA-206ENST00000583475 DLDP09622 509 aaKnown RBP4.38□□□□□ -1.71
VAPA-206ENST00000583475 NPSP0C0P6 89 aa4.38□□□□□ -1.71
VAPA-206ENST00000583475 TPTEP56180 551 aa4.38□□□□□ -1.71
VAPA-206ENST00000583475 TIRAPP58753 221 aa4.38□□□□□ -1.71
VAPA-206ENST00000583475 HOXA4Q00056 320 aaPredicted RBP4.38□□□□□ -1.71
VAPA-206ENST00000583475 TIAL1Q01085 375 aaKnown RBP eCLIP4.38□□□□□ -1.712e-8■■■■■ 29.5
VAPA-206ENST00000583475 E2F1Q01094 437 aa4.38□□□□□ -1.71
VAPA-206ENST00000583475 TMEM119Q4V9L6 283 aa4.38□□□□□ -1.71
VAPA-206ENST00000583475 CACHD1Q5VU97 1274 aa4.38□□□□□ -1.71
VAPA-206ENST00000583475 SUMO4Q6EEV6 95 aa4.38□□□□□ -1.71
VAPA-206ENST00000583475 MTHFD1LQ6UB35 978 aa4.38□□□□□ -1.71
VAPA-206ENST00000583475 DPY19L3Q6ZPD9 716 aa4.38□□□□□ -1.71
VAPA-206ENST00000583475 ZNF804AQ7Z570 1209 aa4.38□□□□□ -1.71
VAPA-206ENST00000583475 SRRM1Q8IYB3 904 aaKnown RBP4.38□□□□□ -1.71
VAPA-206ENST00000583475 TTC17Q96AE7 1141 aa4.38□□□□□ -1.71
VAPA-206ENST00000583475 CTHRC1Q96CG8 243 aa4.38□□□□□ -1.71
VAPA-206ENST00000583475 C8orf48Q96LL4 319 aa4.38□□□□□ -1.71
VAPA-206ENST00000583475 ITGB1BP2Q9UKP3 347 aa4.38□□□□□ -1.71
VAPA-206ENST00000583475 HDAC9Q9UKV0 1011 aa4.38□□□□□ -1.71
VAPA-206ENST00000583475 CAPN11Q9UMQ6 739 aa4.38□□□□□ -1.71
VAPA-206ENST00000583475 DRG1Q9Y295 367 aaKnown RBP4.38□□□□□ -1.71
VAPA-206ENST00000583475 TISP43B9A030 160 aa4.37□□□□□ -1.71
VAPA-206ENST00000583475 AGPSO00116 658 aa4.37□□□□□ -1.71
VAPA-206ENST00000583475 PMPCBO75439 489 aa4.37□□□□□ -1.71
VAPA-206ENST00000583475 LATS1O95835 1130 aa4.37□□□□□ -1.71
VAPA-206ENST00000583475 ACVR2AP27037 513 aa4.37□□□□□ -1.71
VAPA-206ENST00000583475 EPHA3P29320 983 aa4.37□□□□□ -1.71
VAPA-206ENST00000583475 GKP32189 559 aa4.37□□□□□ -1.71
VAPA-206ENST00000583475 PIK3CBP42338 1070 aa4.37□□□□□ -1.71
VAPA-206ENST00000583475 CPT1AP50416 773 aa4.37□□□□□ -1.71
VAPA-206ENST00000583475 GATMP50440 423 aa4.37□□□□□ -1.71
VAPA-206ENST00000583475 ITGA8P53708 1063 aa4.37□□□□□ -1.71
VAPA-206ENST00000583475 RNASE12Q5GAN4 147 aaKnown RBP4.37□□□□□ -1.71
VAPA-206ENST00000583475 L1TD1Q5T7N2 865 aaKnown RBP4.37□□□□□ -1.71
VAPA-206ENST00000583475 PLAG1Q6DJT9 500 aa4.37□□□□□ -1.71
VAPA-206ENST00000583475 ZNF782Q6ZMW2 699 aaPredicted RBP4.37□□□□□ -1.71
VAPA-206ENST00000583475 YAF2Q8IY57 180 aa4.37□□□□□ -1.71
VAPA-206ENST00000583475 CYP2W1Q8TAV3 490 aa4.37□□□□□ -1.71
VAPA-206ENST00000583475 SNX22Q96L94 193 aa4.37□□□□□ -1.71
VAPA-206ENST00000583475 UNKQ9C0B0 810 aaKnown RBP4.37□□□□□ -1.71
VAPA-206ENST00000583475 USP22Q9UPT9 525 aa4.37□□□□□ -1.71
VAPA-206ENST00000583475 COL3A1P02461 1466 aaPredicted RBP4.37□□□□□ -1.71
VAPA-206ENST00000583475 LINC01548A6NM66 108 aa4.36□□□□□ -1.71
VAPA-206ENST00000583475 PQBP1O60828 265 aaKnown RBP4.36□□□□□ -1.71
VAPA-206ENST00000583475 PIAS2O75928 621 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms