RNA–Protein interactions for RNA: ENST00000582331.2

CCDC47-205, Transcript of coiled-coil domain containing 47, humanhuman

TSL 3

Gene CCDC47, Length 693 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-205ENST00000582331 C4orf32Q8N8J7 132 aa8.18□□□□□ -1.1
CCDC47-205ENST00000582331 NSUN7Q8NE18 718 aaKnown RBP8.18□□□□□ -1.1
CCDC47-205ENST00000582331 SPATA18Q8TC71 538 aa8.18□□□□□ -1.1
CCDC47-205ENST00000582331 MSTO1Q9BUK6 570 aa8.18□□□□□ -1.1
CCDC47-205ENST00000582331 CCSER1Q9C0I3 900 aa8.18□□□□□ -1.1
CCDC47-205ENST00000582331 UPF2Q9HAU5 1272 aaKnown RBP8.18□□□□□ -1.1
CCDC47-205ENST00000582331 ABCB6Q9NP58 842 aa8.18□□□□□ -1.1
CCDC47-205ENST00000582331 DPP3Q9NY33 737 aa8.18□□□□□ -1.1
CCDC47-205ENST00000582331 ARHGAP26Q9UNA1 814 aa8.18□□□□□ -1.1
CCDC47-205ENST00000582331 PTPRDP23468 1912 aa8.18□□□□□ -1.1
CCDC47-205ENST00000582331 ADAMTS9Q9P2N4 1935 aa8.18□□□□□ -1.1
CCDC47-205ENST00000582331 TSC2P49815 1807 aa8.17□□□□□ -1.1
CCDC47-205ENST00000582331 A0A0A0MRY4 1105 aa8.17□□□□□ -1.1
CCDC47-205ENST00000582331 A0A1W2PQD8 194 aa8.17□□□□□ -1.1
CCDC47-205ENST00000582331 PP2D1A8MPX8 630 aa8.17□□□□□ -1.1
CCDC47-205ENST00000582331 KPNA7A9QM74 516 aa8.17□□□□□ -1.1
CCDC47-205ENST00000582331 HNRNPDLO14979 420 aaKnown RBP8.17□□□□□ -1.1
CCDC47-205ENST00000582331 JAK2O60674 1132 aa8.17□□□□□ -1.1
CCDC47-205ENST00000582331 ADAM23O75077 832 aa8.17□□□□□ -1.1
CCDC47-205ENST00000582331 CYP17A1P05093 508 aa8.17□□□□□ -1.1
CCDC47-205ENST00000582331 CYP2F1P24903 491 aa8.17□□□□□ -1.1
CCDC47-205ENST00000582331 EIF2DP41214 584 aaKnown RBP8.17□□□□□ -1.1
CCDC47-205ENST00000582331 GRIA2P42262 883 aa8.17□□□□□ -1.1
CCDC47-205ENST00000582331 KIR2DL1P43626 348 aaPredicted RBP8.17□□□□□ -1.1
CCDC47-205ENST00000582331 NCKAP1LP55160 1127 aa8.17□□□□□ -1.1
CCDC47-205ENST00000582331 DHCR24Q15392 516 aa8.17□□□□□ -1.1
CCDC47-205ENST00000582331 ME3Q16798 604 aa8.17□□□□□ -1.1
CCDC47-205ENST00000582331 PLEKHG6Q3KR16 790 aa8.17□□□□□ -1.1
CCDC47-205ENST00000582331 SV2CQ496J9 727 aa8.17□□□□□ -1.1
CCDC47-205ENST00000582331 KCNK18Q7Z418 384 aa8.17□□□□□ -1.1
CCDC47-205ENST00000582331 FILIP1Q7Z7B0 1213 aa8.17□□□□□ -1.1
CCDC47-205ENST00000582331 GLRX5Q86SX6 157 aa8.17□□□□□ -1.1
CCDC47-205ENST00000582331 SLCO6A1Q86UG4 719 aa8.17□□□□□ -1.1
CCDC47-205ENST00000582331 SFTPA1Q8IWL2 248 aa8.17□□□□□ -1.1
CCDC47-205ENST00000582331 RGL4Q8IZJ4 473 aa8.17□□□□□ -1.1
CCDC47-205ENST00000582331 ADGRG2Q8IZP9 1017 aa8.17□□□□□ -1.1
CCDC47-205ENST00000582331 IGSF22Q8N9C0 903 aa8.17□□□□□ -1.1
CCDC47-205ENST00000582331 LEO1Q8WVC0 666 aaPredicted RBP8.17□□□□□ -1.1
CCDC47-205ENST00000582331 GTF3C6Q969F1 213 aa8.17□□□□□ -1.1
CCDC47-205ENST00000582331 PNMA5Q96PV4 448 aa8.17□□□□□ -1.1
CCDC47-205ENST00000582331 FAM124BQ9H5Z6 455 aaPredicted RBP8.17□□□□□ -1.1
CCDC47-205ENST00000582331 ASB7Q9H672 318 aa8.17□□□□□ -1.1
CCDC47-205ENST00000582331 ZDHHC4Q9NPG8 344 aa8.17□□□□□ -1.1
CCDC47-205ENST00000582331 ARHGEF4Q9NR80 690 aa8.17□□□□□ -1.1
CCDC47-205ENST00000582331 KIAA1522Q9P206 1035 aaPredicted RBP8.17□□□□□ -1.1
CCDC47-205ENST00000582331 LARSQ9P2J5 1176 aaKnown RBP8.17□□□□□ -1.1
CCDC47-205ENST00000582331 DKK4Q9UBT3 224 aa8.17□□□□□ -1.1
CCDC47-205ENST00000582331 CPSF3Q9UKF6 684 aaKnown RBP8.17□□□□□ -1.1
CCDC47-205ENST00000582331 C2CD2Q9Y426 696 aa8.17□□□□□ -1.1
CCDC47-205ENST00000582331 OBSL1O75147 1896 aa8.17□□□□□ -1.1
CCDC47-205ENST00000582331 ANK1P16157 1881 aa8.17□□□□□ -1.1
CCDC47-205ENST00000582331 CACNA1EQ15878 2313 aa8.17□□□□□ -1.1
CCDC47-205ENST00000582331 A0A0B4J269 797 aa8.16□□□□□ -1.1
CCDC47-205ENST00000582331 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.16□□□□□ -1.1
CCDC47-205ENST00000582331 LEFTY2O00292 366 aa8.16□□□□□ -1.1
CCDC47-205ENST00000582331 SLC9A3R1O14745 358 aaPredicted RBP8.16□□□□□ -1.1
CCDC47-205ENST00000582331 ZBTB24O43167 697 aaPredicted RBP8.16□□□□□ -1.1
CCDC47-205ENST00000582331 ZNF217O75362 1048 aa8.16□□□□□ -1.1
CCDC47-205ENST00000582331 FLNBO75369 2602 aaKnown RBP8.16□□□□□ -1.1
CCDC47-205ENST00000582331 GJB3O75712 270 aa8.16□□□□□ -1.1
CCDC47-205ENST00000582331 PIGRP01833 764 aa8.16□□□□□ -1.1
CCDC47-205ENST00000582331 GNSP15586 552 aa8.16□□□□□ -1.1
CCDC47-205ENST00000582331 PFKLP17858 780 aa8.16□□□□□ -1.1
CCDC47-205ENST00000582331 GABRG2P18507 467 aa8.16□□□□□ -1.1
CCDC47-205ENST00000582331 SCP2P22307 547 aa8.16□□□□□ -1.1
CCDC47-205ENST00000582331 PI4KAP42356 2102 aa8.16□□□□□ -1.1
CCDC47-205ENST00000582331 TRAPPC10P48553 1259 aa8.16□□□□□ -1.1
CCDC47-205ENST00000582331 ZXDBP98169 803 aa8.16□□□□□ -1.1
CCDC47-205ENST00000582331 ATP2C1P98194 919 aaPredicted RBP8.16□□□□□ -1.1
CCDC47-205ENST00000582331 MYL7Q01449 175 aa8.16□□□□□ -1.1
CCDC47-205ENST00000582331 MESP2Q0VG99 397 aa8.16□□□□□ -1.1
CCDC47-205ENST00000582331 RESTQ13127 1097 aa8.16□□□□□ -1.1
CCDC47-205ENST00000582331 ZRSR1Q15695 479 aaKnown RBP8.16□□□□□ -1.1
CCDC47-205ENST00000582331 INTS6LQ5JSJ4 861 aaKnown RBP8.16□□□□□ -1.1
CCDC47-205ENST00000582331 SYCP2LQ5T4T6 812 aa8.16□□□□□ -1.1
CCDC47-205ENST00000582331 TMPRSS7Q7RTY8 843 aa8.16□□□□□ -1.1
CCDC47-205ENST00000582331 TRMT11Q7Z4G4 463 aaKnown RBP8.16□□□□□ -1.1
CCDC47-205ENST00000582331 SPATA2LQ8IUW3 424 aaPredicted RBP8.16□□□□□ -1.1
CCDC47-205ENST00000582331 SLC41A1Q8IVJ1 513 aa8.16□□□□□ -1.1
CCDC47-205ENST00000582331 SCN4BQ8IWT1 228 aa8.16□□□□□ -1.1
CCDC47-205ENST00000582331 KIAA1958Q8N8K9 716 aa8.16□□□□□ -1.1
CCDC47-205ENST00000582331 SYT2Q8N9I0 419 aaPredicted RBP8.16□□□□□ -1.1
CCDC47-205ENST00000582331 TRIML1Q8N9V2 468 aa8.16□□□□□ -1.1
CCDC47-205ENST00000582331 KCNN1Q92952 543 aa8.16□□□□□ -1.1
CCDC47-205ENST00000582331 HSPA12BQ96MM6 686 aa8.16□□□□□ -1.1
CCDC47-205ENST00000582331 PCDH15Q96QU1 1955 aa8.16□□□□□ -1.1
CCDC47-205ENST00000582331 UBL7Q96S82 380 aaPredicted RBP8.16□□□□□ -1.1
CCDC47-205ENST00000582331 ACBD6Q9BR61 282 aa8.16□□□□□ -1.1
CCDC47-205ENST00000582331 ZDHHC5Q9C0B5 715 aa8.16□□□□□ -1.1
CCDC47-205ENST00000582331 FOXP1Q9H334 677 aaPredicted RBP8.16□□□□□ -1.1
CCDC47-205ENST00000582331 DDX43Q9NXZ2 648 aaKnown RBP8.16□□□□□ -1.1
CCDC47-205ENST00000582331 SUSD2Q9UGT4 822 aa8.16□□□□□ -1.1
CCDC47-205ENST00000582331 GTF3C4Q9UKN8 822 aa8.16□□□□□ -1.1
CCDC47-205ENST00000582331 PLXNB3Q9ULL4 1909 aa8.16□□□□□ -1.1
CCDC47-205ENST00000582331 NOL7Q9UMY1 257 aaKnown RBP8.16□□□□□ -1.1
CCDC47-205ENST00000582331 PLXND1Q9Y4D7 1925 aa8.15□□□□□ -1.1
CCDC47-205ENST00000582331 A0A087WV48 116 aa8.15□□□□□ -1.1
CCDC47-205ENST00000582331 IGHV1OR15-9A0A0B4J2B8 117 aa8.15□□□□□ -1.1
CCDC47-205ENST00000582331 NPHP3-ACAD11A0A0J9YXS1 232 aa8.15□□□□□ -1.1
CCDC47-205ENST00000582331 TBC1D3BA6NDS4 549 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms