RNA–Protein interactions for RNA: ENST00000581979.5

SRSF1-204, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 1 (best)

Gene SRSF1, Length 1,720 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-204ENST00000581979 SENP8Q96LD8 212 aa13.27□□□□□ -0.28
SRSF1-204ENST00000581979 OSBPL9Q96SU4 736 aa13.27□□□□□ -0.28
SRSF1-204ENST00000581979 PSMB7Q99436 277 aa13.27□□□□□ -0.28
SRSF1-204ENST00000581979 APOL5Q9BWW9 433 aa13.27□□□□□ -0.28
SRSF1-204ENST00000581979 TLR10Q9BXR5 811 aa13.27□□□□□ -0.28
SRSF1-204ENST00000581979 DZANK1Q9NVP4 752 aa13.27□□□□□ -0.28
SRSF1-204ENST00000581979 O00370 1275 aa13.27□□□□□ -0.29
SRSF1-204ENST00000581979 KIF4AO95239 1232 aa13.27□□□□□ -0.29
SRSF1-204ENST00000581979 SOD2P04179 222 aa13.27□□□□□ -0.29
SRSF1-204ENST00000581979 MMP8P22894 467 aa13.27□□□□□ -0.29
SRSF1-204ENST00000581979 WARSP23381 471 aaKnown RBP13.27□□□□□ -0.29
SRSF1-204ENST00000581979 MESDQ14696 234 aa13.27□□□□□ -0.29
SRSF1-204ENST00000581979 GOLGA7BQ2TAP0 167 aa13.27□□□□□ -0.29
SRSF1-204ENST00000581979 CES5AQ6NT32 575 aa13.27□□□□□ -0.29
SRSF1-204ENST00000581979 C11orf63Q6NUN7 778 aa13.27□□□□□ -0.29
SRSF1-204ENST00000581979 LIMS2Q7Z4I7 341 aa13.27□□□□□ -0.29
SRSF1-204ENST00000581979 NT5DC3Q86UY8 548 aa13.27□□□□□ -0.29
SRSF1-204ENST00000581979 PDCL2Q8N4E4 241 aa13.27□□□□□ -0.29
SRSF1-204ENST00000581979 WDTC1Q8N5D0 677 aa13.27□□□□□ -0.29
SRSF1-204ENST00000581979 MSANTD4Q8NCY6 345 aa13.27□□□□□ -0.29
SRSF1-204ENST00000581979 EDAQ92838 391 aa13.27□□□□□ -0.29
SRSF1-204ENST00000581979 CAPZA3Q96KX2 299 aa13.27□□□□□ -0.29
SRSF1-204ENST00000581979 NECTIN4Q96NY8 510 aa13.27□□□□□ -0.29
SRSF1-204ENST00000581979 PAAF1Q9BRP4 392 aa13.27□□□□□ -0.29
SRSF1-204ENST00000581979 EMILIN2Q9BXX0 1053 aa13.27□□□□□ -0.29
SRSF1-204ENST00000581979 DPEP3Q9H4B8 488 aa13.27□□□□□ -0.29
SRSF1-204ENST00000581979 MRPL47Q9HD33 250 aaKnown RBP13.27□□□□□ -0.29
SRSF1-204ENST00000581979 MRPL17Q9NRX2 175 aaKnown RBP13.27□□□□□ -0.29
SRSF1-204ENST00000581979 TSPAN16Q9UKR8 245 aa13.27□□□□□ -0.29
SRSF1-204ENST00000581979 NME7Q9Y5B8 376 aa13.27□□□□□ -0.29
SRSF1-204ENST00000581979 SCINQ9Y6U3 715 aa13.27□□□□□ -0.29
SRSF1-204ENST00000581979 TECTAO75443 2155 aa13.26□□□□□ -0.29
SRSF1-204ENST00000581979 HCRTO43612 131 aa13.26□□□□□ -0.29
SRSF1-204ENST00000581979 B3GAT3O94766 335 aa13.26□□□□□ -0.29
SRSF1-204ENST00000581979 CNPP09543 421 aaKnown RBP13.26□□□□□ -0.29
SRSF1-204ENST00000581979 FAM163BP0C2L3 166 aa13.26□□□□□ -0.29
SRSF1-204ENST00000581979 EPCAMP16422 314 aa13.26□□□□□ -0.29
SRSF1-204ENST00000581979 CXCR5P32302 372 aa13.26□□□□□ -0.29
SRSF1-204ENST00000581979 OR1G1P47890 313 aa13.26□□□□□ -0.29
SRSF1-204ENST00000581979 CKAP4Q07065 602 aaKnown RBP13.26□□□□□ -0.29
SRSF1-204ENST00000581979 PTP4A2Q12974 167 aa13.26□□□□□ -0.29
SRSF1-204ENST00000581979 PPP1R26Q5T8A7 1209 aaPredicted RBP13.26□□□□□ -0.29
SRSF1-204ENST00000581979 LCLAT1Q6UWP7 414 aa13.26□□□□□ -0.29
SRSF1-204ENST00000581979 C12orf29Q8N999 325 aa13.26□□□□□ -0.29
SRSF1-204ENST00000581979 C3orf58Q8NDZ4 430 aa13.26□□□□□ -0.29
SRSF1-204ENST00000581979 UBA3Q8TBC4 463 aa13.26□□□□□ -0.29
SRSF1-204ENST00000581979 BTBD6Q96KE9 485 aa13.26□□□□□ -0.29
SRSF1-204ENST00000581979 KLHL5Q96PQ7 755 aa13.26□□□□□ -0.29
SRSF1-204ENST00000581979 HERC2P3Q9BVR0 1158 aa13.26□□□□□ -0.29
SRSF1-204ENST00000581979 FAM49BQ9NUQ9 324 aa13.26□□□□□ -0.29
SRSF1-204ENST00000581979 ANAPC7Q9UJX3 599 aa13.26□□□□□ -0.29
SRSF1-204ENST00000581979 PRG3Q9Y2Y8 225 aaPredicted RBP13.26□□□□□ -0.29
SRSF1-204ENST00000581979 ZNF185O15231 689 aa13.25□□□□□ -0.29
SRSF1-204ENST00000581979 IGFBP6P24592 240 aaPredicted RBP13.25□□□□□ -0.29
SRSF1-204ENST00000581979 LMO2P25791 158 aa13.25□□□□□ -0.29
SRSF1-204ENST00000581979 PLA2G5P39877 138 aa13.25□□□□□ -0.29
SRSF1-204ENST00000581979 MTHFRP42898 656 aa13.25□□□□□ -0.29
SRSF1-204ENST00000581979 CLCN4P51793 760 aa13.25□□□□□ -0.29
SRSF1-204ENST00000581979 WSCD1Q658N2 575 aa13.25□□□□□ -0.29
SRSF1-204ENST00000581979 ARHGAP17Q68EM7 881 aa13.25□□□□□ -0.29
SRSF1-204ENST00000581979 OSTM1Q86WC4 334 aa13.25□□□□□ -0.29
SRSF1-204ENST00000581979 CRYBG2Q8N1P7 616 aa13.25□□□□□ -0.29
SRSF1-204ENST00000581979 TMEM86AQ8N2M4 240 aa13.25□□□□□ -0.29
SRSF1-204ENST00000581979 TNIP3Q96KP6 325 aa13.25□□□□□ -0.29
SRSF1-204ENST00000581979 SYNCQ9H7C4 482 aa13.25□□□□□ -0.29
SRSF1-204ENST00000581979 ABCB6Q9NP58 842 aa13.25□□□□□ -0.29
SRSF1-204ENST00000581979 PARVAQ9NVD7 372 aa13.25□□□□□ -0.29
SRSF1-204ENST00000581979 HESX1Q9UBX0 185 aa13.25□□□□□ -0.29
SRSF1-204ENST00000581979 CDH22Q9UJ99 828 aa13.25□□□□□ -0.29
SRSF1-204ENST00000581979 STRIP2Q9ULQ0 834 aa13.25□□□□□ -0.29
SRSF1-204ENST00000581979 SSX2IPQ9Y2D8 614 aa13.25□□□□□ -0.29
SRSF1-204ENST00000581979 ALG6Q9Y672 507 aa13.25□□□□□ -0.29
SRSF1-204ENST00000581979 URODP06132 367 aa13.25□□□□□ -0.29
SRSF1-204ENST00000581979 ODC1P11926 461 aa13.25□□□□□ -0.29
SRSF1-204ENST00000581979 PAX3P23760 479 aa13.25□□□□□ -0.29
SRSF1-204ENST00000581979 GPD2P43304 727 aa13.25□□□□□ -0.29
SRSF1-204ENST00000581979 MAMLD1Q13495 774 aa13.25□□□□□ -0.29
SRSF1-204ENST00000581979 PTPN20Q4JDL3 420 aa13.25□□□□□ -0.29
SRSF1-204ENST00000581979 CYP4A22Q5TCH4 519 aa13.25□□□□□ -0.29
SRSF1-204ENST00000581979 CCDC181Q5TID7 509 aa13.25□□□□□ -0.29
SRSF1-204ENST00000581979 KIAA0319Q5VV43 1072 aa13.25□□□□□ -0.29
SRSF1-204ENST00000581979 PLEKHA7Q6IQ23 1121 aa13.25□□□□□ -0.29
SRSF1-204ENST00000581979 KIAA1841Q6NSI8 718 aa13.25□□□□□ -0.29
SRSF1-204ENST00000581979 DNAJC24Q6P3W2 148 aa13.25□□□□□ -0.29
SRSF1-204ENST00000581979 TAS1R1Q7RTX1 841 aa13.25□□□□□ -0.29
SRSF1-204ENST00000581979 GPR65Q8IYL9 337 aa13.25□□□□□ -0.29
SRSF1-204ENST00000581979 LRRN4CLQ8ND94 238 aa13.25□□□□□ -0.29
SRSF1-204ENST00000581979 HASPINQ8TF76 798 aa13.25□□□□□ -0.29
SRSF1-204ENST00000581979 COG1Q8WTW3 980 aa13.25□□□□□ -0.29
SRSF1-204ENST00000581979 RIPOR3Q96MK2 946 aa13.25□□□□□ -0.29
SRSF1-204ENST00000581979 LPIN3Q9BQK8 851 aa13.25□□□□□ -0.29
SRSF1-204ENST00000581979 COLEC11Q9BWP8 271 aa13.25□□□□□ -0.29
SRSF1-204ENST00000581979 POMKQ9H5K3 350 aa13.25□□□□□ -0.29
SRSF1-204ENST00000581979 RXFP1Q9HBX9 757 aa13.25□□□□□ -0.29
SRSF1-204ENST00000581979 CHST7Q9NS84 486 aa13.25□□□□□ -0.29
SRSF1-204ENST00000581979 DDX43Q9NXZ2 648 aaKnown RBP13.25□□□□□ -0.29
SRSF1-204ENST00000581979 CYTH4Q9UIA0 394 aa13.25□□□□□ -0.29
SRSF1-204ENST00000581979 NR2E1Q9Y466 385 aa13.25□□□□□ -0.29
SRSF1-204ENST00000581979 TSC2P49815 1807 aa13.25□□□□□ -0.29
SRSF1-204ENST00000581979 CTAGE15A4D2H0 777 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms