RNA–Protein interactions for RNA: ENST00000580419.5

SMARCE1-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-216ENST00000580419 ZNF699Q32M78 642 aa15.42■□□□□ 0.06
SMARCE1-216ENST00000580419 MDH1BQ5I0G3 518 aa15.42■□□□□ 0.06
SMARCE1-216ENST00000580419 FOXD4L5Q5VV16 416 aaPredicted RBP15.42■□□□□ 0.06
SMARCE1-216ENST00000580419 Q6ZS52 159 aa15.42■□□□□ 0.06
SMARCE1-216ENST00000580419 INTS8Q75QN2 995 aaKnown RBP15.42■□□□□ 0.06
SMARCE1-216ENST00000580419 SYT13Q7L8C5 426 aa15.42■□□□□ 0.06
SMARCE1-216ENST00000580419 NUP93Q8N1F7 819 aa15.42■□□□□ 0.06
SMARCE1-216ENST00000580419 GUF1Q8N442 669 aaKnown RBP15.42■□□□□ 0.06
SMARCE1-216ENST00000580419 ARL14EPQ8N8R7 260 aaPredicted RBP15.42■□□□□ 0.06
SMARCE1-216ENST00000580419 PLEKHO2Q8TD55 490 aa15.42■□□□□ 0.06
SMARCE1-216ENST00000580419 SH3RF2Q8TEC5 729 aa15.42■□□□□ 0.06
SMARCE1-216ENST00000580419 FOXD4L4Q8WXT5 416 aaPredicted RBP15.42■□□□□ 0.06
SMARCE1-216ENST00000580419 CYP2S1Q96SQ9 504 aa15.42■□□□□ 0.06
SMARCE1-216ENST00000580419 P2RY13Q9BPV8 354 aa15.42■□□□□ 0.06
SMARCE1-216ENST00000580419 GTPBP4Q9BZE4 634 aaKnown RBP15.42■□□□□ 0.06
SMARCE1-216ENST00000580419 CSNK1G1Q9HCP0 422 aa15.42■□□□□ 0.06
SMARCE1-216ENST00000580419 PNPLA8Q9NP80 782 aa15.42■□□□□ 0.06
SMARCE1-216ENST00000580419 RBM12Q9NTZ6 932 aaKnown RBP15.42■□□□□ 0.06
SMARCE1-216ENST00000580419 ZDHHC9Q9Y397 364 aa15.42■□□□□ 0.06
SMARCE1-216ENST00000580419 A0A0A0MRY4 1105 aa15.41■□□□□ 0.06
SMARCE1-216ENST00000580419 A0A1B0GVL5 298 aa15.41■□□□□ 0.06
SMARCE1-216ENST00000580419 C2orf78A6NCI8 922 aa15.41■□□□□ 0.06
SMARCE1-216ENST00000580419 TNFRSF10BO14763 440 aa15.41■□□□□ 0.06
SMARCE1-216ENST00000580419 HRO43593 1189 aa15.41■□□□□ 0.06
SMARCE1-216ENST00000580419 VNN1O95497 513 aa15.41■□□□□ 0.06
SMARCE1-216ENST00000580419 ZDHHC11BP0C7U3 371 aa15.41■□□□□ 0.06
SMARCE1-216ENST00000580419 RPL13P26373 211 aaKnown RBP15.41■□□□□ 0.06
SMARCE1-216ENST00000580419 GTF2H1P32780 548 aa15.41■□□□□ 0.06
SMARCE1-216ENST00000580419 GALK1P51570 392 aa15.41■□□□□ 0.06
SMARCE1-216ENST00000580419 DPYDQ12882 1025 aa15.41■□□□□ 0.06
SMARCE1-216ENST00000580419 HSF5Q4G112 596 aaPredicted RBP15.41■□□□□ 0.06
SMARCE1-216ENST00000580419 SV2AQ7L0J3 742 aa15.41■□□□□ 0.06
SMARCE1-216ENST00000580419 GPIHBP1Q8IV16 184 aa15.41■□□□□ 0.06
SMARCE1-216ENST00000580419 DCLK2Q8N568 766 aa15.41■□□□□ 0.06
SMARCE1-216ENST00000580419 TTC39CQ8N584 583 aa15.41■□□□□ 0.06
SMARCE1-216ENST00000580419 STKLD1Q8NE28 680 aa15.41■□□□□ 0.06
SMARCE1-216ENST00000580419 CD101Q93033 1021 aa15.41■□□□□ 0.06
SMARCE1-216ENST00000580419 ACDQ96AP0 544 aa15.41■□□□□ 0.06
SMARCE1-216ENST00000580419 SMARCD1Q96GM5 515 aa15.41■□□□□ 0.06
SMARCE1-216ENST00000580419 B3GNT5Q9BYG0 378 aa15.41■□□□□ 0.06
SMARCE1-216ENST00000580419 DNAI2Q9GZS0 605 aa15.41■□□□□ 0.06
SMARCE1-216ENST00000580419 CYP3A43Q9HB55 503 aa15.41■□□□□ 0.06
SMARCE1-216ENST00000580419 DMAP1Q9NPF5 467 aaPredicted RBP15.41■□□□□ 0.06
SMARCE1-216ENST00000580419 TBC1D14Q9P2M4 693 aa15.41■□□□□ 0.06
SMARCE1-216ENST00000580419 EBF1Q9UH73 591 aa15.41■□□□□ 0.06
SMARCE1-216ENST00000580419 EML5Q05BV3 1969 aa15.41■□□□□ 0.06
SMARCE1-216ENST00000580419 E2F8A0AVK6 867 aa15.4■□□□□ 0.06
SMARCE1-216ENST00000580419 ARSAP15289 507 aa15.4■□□□□ 0.06
SMARCE1-216ENST00000580419 YWHAQP27348 245 aa15.4■□□□□ 0.06
SMARCE1-216ENST00000580419 USP46P62068 366 aa15.4■□□□□ 0.06
SMARCE1-216ENST00000580419 INCA1Q0VD86 236 aa15.4■□□□□ 0.06
SMARCE1-216ENST00000580419 TAF10Q12962 218 aa15.4■□□□□ 0.06
SMARCE1-216ENST00000580419 BIRC3Q13489 604 aa15.4■□□□□ 0.06
SMARCE1-216ENST00000580419 SIM2Q14190 667 aaPredicted RBP15.4■□□□□ 0.06
SMARCE1-216ENST00000580419 EDRF1Q3B7T1 1238 aa15.4■□□□□ 0.06
SMARCE1-216ENST00000580419 COBLL1Q53SF7 1204 aa15.4■□□□□ 0.06
SMARCE1-216ENST00000580419 TRIM68Q6AZZ1 485 aa15.4■□□□□ 0.06
SMARCE1-216ENST00000580419 GRAMD1CQ8IYS0 662 aa15.4■□□□□ 0.06
SMARCE1-216ENST00000580419 ADGRG2Q8IZP9 1017 aa15.4■□□□□ 0.06
SMARCE1-216ENST00000580419 ZNF276Q8N554 614 aa15.4■□□□□ 0.06
SMARCE1-216ENST00000580419 GAB3Q8WWW8 586 aa15.4■□□□□ 0.06
SMARCE1-216ENST00000580419 ZC3H10Q96K80 434 aaKnown RBP15.4■□□□□ 0.06
SMARCE1-216ENST00000580419 ZNF518BQ9C0D4 1074 aa15.4■□□□□ 0.06
SMARCE1-216ENST00000580419 TRPC7Q9HCX4 862 aa15.4■□□□□ 0.06
SMARCE1-216ENST00000580419 TMEM30AQ9NV96 361 aa15.4■□□□□ 0.06
SMARCE1-216ENST00000580419 NXF1Q9UBU9 619 aaKnown RBP15.4■□□□□ 0.06
SMARCE1-216ENST00000580419 MYOFQ9NZM1 2061 aa15.4■□□□□ 0.06
SMARCE1-216ENST00000580419 LEFTY2O00292 366 aa15.39■□□□□ 0.05
SMARCE1-216ENST00000580419 FNTBP49356 437 aa15.39■□□□□ 0.05
SMARCE1-216ENST00000580419 NDUFA8P51970 172 aa15.39■□□□□ 0.05
SMARCE1-216ENST00000580419 ZXDBP98169 803 aa15.39■□□□□ 0.05
SMARCE1-216ENST00000580419 CSRP2Q16527 193 aa15.39■□□□□ 0.05
SMARCE1-216ENST00000580419 FOXD4L6Q3SYB3 417 aaPredicted RBP15.39■□□□□ 0.05
SMARCE1-216ENST00000580419 FOXD4L3Q6VB84 417 aaPredicted RBP15.39■□□□□ 0.05
SMARCE1-216ENST00000580419 KRBA2Q6ZNG9 492 aa15.39■□□□□ 0.05
SMARCE1-216ENST00000580419 PAQR9Q6ZVX9 377 aa15.39■□□□□ 0.05
SMARCE1-216ENST00000580419 FAM35AQ86V20 835 aa15.39■□□□□ 0.05
SMARCE1-216ENST00000580419 C11orf74Q86VG3 221 aa15.39■□□□□ 0.05
SMARCE1-216ENST00000580419 FUKQ8N0W3 1084 aa15.39■□□□□ 0.05
SMARCE1-216ENST00000580419 KCNV2Q8TDN2 545 aa15.39■□□□□ 0.05
SMARCE1-216ENST00000580419 RTKNQ9BST9 563 aa15.39■□□□□ 0.05
SMARCE1-216ENST00000580419 RNF38Q9H0F5 515 aa15.39■□□□□ 0.05
SMARCE1-216ENST00000580419 DPEP3Q9H4B8 488 aa15.39■□□□□ 0.05
SMARCE1-216ENST00000580419 FBXO44Q9H4M3 255 aa15.39■□□□□ 0.05
SMARCE1-216ENST00000580419 SLC8A2Q9UPR5 921 aa15.39■□□□□ 0.05
SMARCE1-216ENST00000580419 PCDHGA5Q9Y5G8 931 aa15.39■□□□□ 0.05
SMARCE1-216ENST00000580419 LAMA1P25391 3075 aa15.38■□□□□ 0.05
SMARCE1-216ENST00000580419 TULP1O00294 542 aaPredicted RBP15.38■□□□□ 0.05
SMARCE1-216ENST00000580419 RNF40O75150 1001 aa15.38■□□□□ 0.05
SMARCE1-216ENST00000580419 EGFP01133 1207 aa15.38■□□□□ 0.05
SMARCE1-216ENST00000580419 RAP1GAPP47736 663 aa15.38■□□□□ 0.05
SMARCE1-216ENST00000580419 CASP4P49662 377 aa15.38■□□□□ 0.05
SMARCE1-216ENST00000580419 VAMP7P51809 220 aa15.38■□□□□ 0.05
SMARCE1-216ENST00000580419 CDR1P51861 262 aa15.38■□□□□ 0.05
SMARCE1-216ENST00000580419 PREPLQ4J6C6 727 aaPredicted RBP15.38■□□□□ 0.05
SMARCE1-216ENST00000580419 ZCWPW2Q504Y3 356 aa15.38■□□□□ 0.05
SMARCE1-216ENST00000580419 C1orf220Q5T0J3 134 aa15.38■□□□□ 0.05
SMARCE1-216ENST00000580419 KLHDC10Q6PID8 442 aa15.38■□□□□ 0.05
SMARCE1-216ENST00000580419 DGLUCYQ7Z3D6 616 aa15.38■□□□□ 0.05
SMARCE1-216ENST00000580419 CACNA2D4Q7Z3S7 1137 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms