RNA–Protein interactions for RNA: ENST00000580222.5

LIMD2-209, Transcript of LIM domain containing 2, humanhuman

TSL 3

Gene LIMD2, Length 846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-209ENST00000580222 PRPF6O94906 941 aaKnown RBP20.73■□□□□ 0.91
LIMD2-209ENST00000580222 OPRD1P41143 372 aa20.73■□□□□ 0.91
LIMD2-209ENST00000580222 P2RY2P41231 377 aa20.73■□□□□ 0.91
LIMD2-209ENST00000580222 STK4Q13043 487 aa20.73■□□□□ 0.91
LIMD2-209ENST00000580222 ZNF268Q14587 947 aaPredicted RBP20.73■□□□□ 0.91
LIMD2-209ENST00000580222 ZNF77Q15935 545 aa20.73■□□□□ 0.91
LIMD2-209ENST00000580222 SPATA1Q5VX52 437 aa20.73■□□□□ 0.91
LIMD2-209ENST00000580222 C9orf57Q5W0N0 161 aa20.73■□□□□ 0.91
LIMD2-209ENST00000580222 ISM2Q6H9L7 571 aa20.73■□□□□ 0.91
LIMD2-209ENST00000580222 ACCSQ96QU6 501 aa20.73■□□□□ 0.91
LIMD2-209ENST00000580222 NUSAP1Q9BXS6 441 aaKnown RBP20.73■□□□□ 0.91
LIMD2-209ENST00000580222 ABI2Q9NYB9 513 aaPredicted RBP20.73■□□□□ 0.91
LIMD2-209ENST00000580222 TMEM63CQ9P1W3 806 aa20.73■□□□□ 0.91
LIMD2-209ENST00000580222 EXOC7Q9UPT5 735 aa20.73■□□□□ 0.91
LIMD2-209ENST00000580222 HNRNPDLO14979 420 aaKnown RBP20.72■□□□□ 0.91
LIMD2-209ENST00000580222 LIG4P49917 911 aa20.72■□□□□ 0.91
LIMD2-209ENST00000580222 CRY1Q16526 586 aa20.72■□□□□ 0.91
LIMD2-209ENST00000580222 ZNF658Q5TYW1 1059 aaPredicted RBP20.72■□□□□ 0.91
LIMD2-209ENST00000580222 SLC23A3Q6PIS1 610 aa20.72■□□□□ 0.91
LIMD2-209ENST00000580222 ZPBP2Q6X784 338 aa20.72■□□□□ 0.91
LIMD2-209ENST00000580222 SYT12Q8IV01 421 aa20.72■□□□□ 0.91
LIMD2-209ENST00000580222 SYCP3Q8IZU3 236 aa20.72■□□□□ 0.91
LIMD2-209ENST00000580222 CAMK1GQ96NX5 476 aa20.72■□□□□ 0.91
LIMD2-209ENST00000580222 STRA6Q9BX79 667 aa20.72■□□□□ 0.91
LIMD2-209ENST00000580222 GTPBP4Q9BZE4 634 aaKnown RBP20.72■□□□□ 0.91
LIMD2-209ENST00000580222 ZMYM5Q9UJ78 669 aa20.72■□□□□ 0.91
LIMD2-209ENST00000580222 MMP17Q9ULZ9 603 aa20.72■□□□□ 0.91
LIMD2-209ENST00000580222 MAGED2Q9UNF1 606 aaPredicted RBP20.72■□□□□ 0.91
LIMD2-209ENST00000580222 PIRO00625 290 aa20.71■□□□□ 0.91
LIMD2-209ENST00000580222 KIF20AO95235 890 aa20.71■□□□□ 0.91
LIMD2-209ENST00000580222 ADRB2P07550 413 aa20.71■□□□□ 0.91
LIMD2-209ENST00000580222 ITPKAP23677 461 aa20.71■□□□□ 0.91
LIMD2-209ENST00000580222 DDX6P26196 483 aaKnown RBP eCLIP20.71■□□□□ 0.91
LIMD2-209ENST00000580222 PPP2R3AQ06190 1150 aa20.71■□□□□ 0.91
LIMD2-209ENST00000580222 WSCD1Q658N2 575 aa20.71■□□□□ 0.91
LIMD2-209ENST00000580222 JADE1Q6IE81 842 aa20.71■□□□□ 0.91
LIMD2-209ENST00000580222 LPCAT2Q7L5N7 544 aa20.71■□□□□ 0.91
LIMD2-209ENST00000580222 EPM2AIP1Q7L775 607 aaPredicted RBP20.71■□□□□ 0.91
LIMD2-209ENST00000580222 NELFCDQ8IXH7 590 aa20.71■□□□□ 0.91
LIMD2-209ENST00000580222 EFCAB13Q8IY85 973 aa20.71■□□□□ 0.91
LIMD2-209ENST00000580222 SMYD4Q8IYR2 804 aaPredicted RBP20.71■□□□□ 0.91
LIMD2-209ENST00000580222 TRIML1Q8N9V2 468 aa20.71■□□□□ 0.91
LIMD2-209ENST00000580222 TMEM206Q9H813 350 aa20.71■□□□□ 0.91
LIMD2-209ENST00000580222 PILRBQ9UKJ0 227 aa20.71■□□□□ 0.91
LIMD2-209ENST00000580222 THADAQ6YHU6 1953 aa20.71■□□□□ 0.91
LIMD2-209ENST00000580222 CITO14578 2027 aa20.71■□□□□ 0.91
LIMD2-209ENST00000580222 GON4LQ3T8J9 2241 aa20.7■□□□□ 0.9
LIMD2-209ENST00000580222 ANO9A1A5B4 782 aa20.7■□□□□ 0.9
LIMD2-209ENST00000580222 NFICP08651 508 aa20.7■□□□□ 0.9
LIMD2-209ENST00000580222 CD59P13987 128 aa20.7■□□□□ 0.9
LIMD2-209ENST00000580222 MATR3P43243 847 aaKnown RBP eCLIP20.7■□□□□ 0.9
LIMD2-209ENST00000580222 ZXDBP98169 803 aa20.7■□□□□ 0.9
LIMD2-209ENST00000580222 KCNA1Q09470 495 aa20.7■□□□□ 0.9
LIMD2-209ENST00000580222 USP4Q13107 963 aa20.7■□□□□ 0.9
LIMD2-209ENST00000580222 MAP7D1Q3KQU3 841 aa20.7■□□□□ 0.9
LIMD2-209ENST00000580222 DEFB119Q8N690 84 aa20.7■□□□□ 0.9
LIMD2-209ENST00000580222 ZNF507Q8TCN5 953 aa20.7■□□□□ 0.9
LIMD2-209ENST00000580222 SCFD1Q8WVM8 642 aa20.7■□□□□ 0.9
LIMD2-209ENST00000580222 HNRNPLLQ8WVV9 542 aaKnown RBP20.7■□□□□ 0.9
LIMD2-209ENST00000580222 MRPS31Q92665 395 aaKnown RBP20.7■□□□□ 0.9
LIMD2-209ENST00000580222 GTPBP2Q9BX10 602 aaKnown RBP20.7■□□□□ 0.9
LIMD2-209ENST00000580222 ZDHHC4Q9NPG8 344 aa20.7■□□□□ 0.9
LIMD2-209ENST00000580222 KALRNO60229 2985 aa20.69■□□□□ 0.9
LIMD2-209ENST00000580222 H0Y626 953 aa20.69■□□□□ 0.9
LIMD2-209ENST00000580222 SGK1O00141 431 aa20.69■□□□□ 0.9
LIMD2-209ENST00000580222 CYB561D2O14569 222 aa20.69■□□□□ 0.9
LIMD2-209ENST00000580222 TRIM16O95361 564 aa20.69■□□□□ 0.9
LIMD2-209ENST00000580222 PIGRP01833 764 aa20.69■□□□□ 0.9
LIMD2-209ENST00000580222 IFNAR2P48551 515 aa20.69■□□□□ 0.9
LIMD2-209ENST00000580222 MORC3Q14149 939 aa20.69■□□□□ 0.9
LIMD2-209ENST00000580222 DDR2Q16832 855 aa20.69■□□□□ 0.9
LIMD2-209ENST00000580222 BMT2Q1RMZ1 405 aa20.69■□□□□ 0.9
LIMD2-209ENST00000580222 EMC10Q5UCC4 262 aa20.69■□□□□ 0.9
LIMD2-209ENST00000580222 ALLCQ8N6M5 410 aa20.69■□□□□ 0.9
LIMD2-209ENST00000580222 PNPLA1Q8N8W4 532 aa20.69■□□□□ 0.9
LIMD2-209ENST00000580222 SPPL2BQ8TCT7 592 aa20.69■□□□□ 0.9
LIMD2-209ENST00000580222 ATP2A3Q93084 1043 aa20.69■□□□□ 0.9
LIMD2-209ENST00000580222 FAM212AQ96EL1 285 aa20.69■□□□□ 0.9
LIMD2-209ENST00000580222 PI4K2AQ9BTU6 479 aa20.69■□□□□ 0.9
LIMD2-209ENST00000580222 TRPC7Q9HCX4 862 aa20.69■□□□□ 0.9
LIMD2-209ENST00000580222 MAPK8IP1Q9UQF2 711 aa20.69■□□□□ 0.9
LIMD2-209ENST00000580222 MAP3K13O43283 966 aa20.68■□□□□ 0.9
LIMD2-209ENST00000580222 CFIP05156 583 aa20.68■□□□□ 0.9
LIMD2-209ENST00000580222 STIM1Q13586 685 aa20.68■□□□□ 0.9
LIMD2-209ENST00000580222 CCDC142Q17RM4 750 aa20.68■□□□□ 0.9
LIMD2-209ENST00000580222 PEAR1Q5VY43 1037 aaPredicted RBP20.68■□□□□ 0.9
LIMD2-209ENST00000580222 RBM43Q6ZSC3 357 aaKnown RBP20.68■□□□□ 0.9
LIMD2-209ENST00000580222 GUF1Q8N442 669 aaKnown RBP20.68■□□□□ 0.9
LIMD2-209ENST00000580222 ARL14EPQ8N8R7 260 aaPredicted RBP20.68■□□□□ 0.9
LIMD2-209ENST00000580222 SH3RF2Q8TEC5 729 aa20.68■□□□□ 0.9
LIMD2-209ENST00000580222 C2orf15Q8WU43 125 aaKnown RBP20.68■□□□□ 0.9
LIMD2-209ENST00000580222 EXOC4Q96A65 974 aa20.68■□□□□ 0.9
LIMD2-209ENST00000580222 IKZF4Q9H2S9 585 aa20.68■□□□□ 0.9
LIMD2-209ENST00000580222 GCNT4Q9P109 453 aa20.68■□□□□ 0.9
LIMD2-209ENST00000580222 C2orf78A6NCI8 922 aa20.67■□□□□ 0.9
LIMD2-209ENST00000580222 SLC6A11P48066 632 aa20.67■□□□□ 0.9
LIMD2-209ENST00000580222 KNOP1Q1ED39 458 aaKnown RBP20.67■□□□□ 0.9
LIMD2-209ENST00000580222 LYSMD4Q5XG99 296 aa20.67■□□□□ 0.9
LIMD2-209ENST00000580222 IL17RCQ8NAC3 791 aa20.67■□□□□ 0.9
LIMD2-209ENST00000580222 TXNDC5Q8NBS9 432 aaKnown RBP20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms