RNA–Protein interactions for RNA: ENST00000580158.1

KPNB1-209, Transcript of karyopherin subunit beta 1, human

TSL 2

Gene KPNB1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KPNB1-209	ENST00000580158	APPL2	Q8NEU8	664 aa		6.54	□□□□□ -1.36
KPNB1-209	ENST00000580158	CRYGN	Q8WXF5	182 aa		6.54	□□□□□ -1.36
KPNB1-209	ENST00000580158	TTC9	Q92623	222 aa		6.54	□□□□□ -1.36
KPNB1-209	ENST00000580158	EZH1	Q92800	747 aa	Predicted RBP	6.54	□□□□□ -1.36
KPNB1-209	ENST00000580158	TNFRSF25	Q93038	417 aa		6.54	□□□□□ -1.36
KPNB1-209	ENST00000580158	ATP2A3	Q93084	1043 aa		6.54	□□□□□ -1.36
KPNB1-209	ENST00000580158	PSMG2	Q969U7	264 aa		6.54	□□□□□ -1.36
KPNB1-209	ENST00000580158	HSPA12B	Q96MM6	686 aa		6.54	□□□□□ -1.36
KPNB1-209	ENST00000580158	ADPGK	Q9BRR6	497 aa		6.54	□□□□□ -1.36
KPNB1-209	ENST00000580158	SMG9	Q9H0W8	520 aa	Known RBP	6.54	□□□□□ -1.36
KPNB1-209	ENST00000580158	C6orf50	Q9HD87	102 aa		6.54	□□□□□ -1.36
KPNB1-209	ENST00000580158	TPSG1	Q9NRR2	321 aa		6.54	□□□□□ -1.36
KPNB1-209	ENST00000580158	NUB1	Q9Y5A7	615 aa		6.54	□□□□□ -1.36
KPNB1-209	ENST00000580158	PCDHGB2	Q9Y5G2	931 aa		6.54	□□□□□ -1.36
KPNB1-209	ENST00000580158	MYH10	P35580	1976 aa		6.54	□□□□□ -1.36
KPNB1-209	ENST00000580158	TP53BP1	Q12888	1972 aa	Predicted RBP	6.54	□□□□□ -1.36
KPNB1-209	ENST00000580158	C2CD3	Q4AC94	2353 aa		6.53	□□□□□ -1.36
KPNB1-209	ENST00000580158	ABCA12	Q86UK0	2595 aa		6.53	□□□□□ -1.36
KPNB1-209	ENST00000580158		A0A1B0GTW7	788 aa		6.53	□□□□□ -1.36
KPNB1-209	ENST00000580158	TCRBV21S2A2	A0A5A6	115 aa		6.53	□□□□□ -1.36
KPNB1-209	ENST00000580158		K7EQS6	105 aa		6.53	□□□□□ -1.36
KPNB1-209	ENST00000580158	N4BP3	O15049	544 aa		6.53	□□□□□ -1.36
KPNB1-209	ENST00000580158	CILP	O75339	1184 aa		6.53	□□□□□ -1.36
KPNB1-209	ENST00000580158	ZNF217	O75362	1048 aa		6.53	□□□□□ -1.36
KPNB1-209	ENST00000580158	KLF8	O95600	359 aa	Predicted RBP	6.53	□□□□□ -1.36
KPNB1-209	ENST00000580158	MYF5	P13349	255 aa		6.53	□□□□□ -1.36
KPNB1-209	ENST00000580158	RXRA	P19793	462 aa		6.53	□□□□□ -1.36
KPNB1-209	ENST00000580158	CR2	P20023	1033 aa		6.53	□□□□□ -1.36
KPNB1-209	ENST00000580158	DDX6	P26196	483 aa	Known RBP eCLIP	6.53	□□□□□ -1.36	1e-22	■□□□□ 8.4
KPNB1-209	ENST00000580158	CIITA	P33076	1130 aa		6.53	□□□□□ -1.36
KPNB1-209	ENST00000580158	CYP4F8	P98187	520 aa		6.53	□□□□□ -1.36
KPNB1-209	ENST00000580158	PTH1R	Q03431	593 aa		6.53	□□□□□ -1.36
KPNB1-209	ENST00000580158	MBTD1	Q05BQ5	628 aa		6.53	□□□□□ -1.36
KPNB1-209	ENST00000580158	SCRN1	Q12765	414 aa		6.53	□□□□□ -1.36
KPNB1-209	ENST00000580158	DUSP4	Q13115	394 aa		6.53	□□□□□ -1.36
KPNB1-209	ENST00000580158	MRPL58	Q14197	206 aa	Known RBP	6.53	□□□□□ -1.36
KPNB1-209	ENST00000580158	VEPH1	Q14D04	833 aa		6.53	□□□□□ -1.36
KPNB1-209	ENST00000580158	EMC2	Q15006	297 aa		6.53	□□□□□ -1.36
KPNB1-209	ENST00000580158	NAIF1	Q69YI7	327 aa	Predicted RBP	6.53	□□□□□ -1.36
KPNB1-209	ENST00000580158	DBX2	Q6ZNG2	339 aa		6.53	□□□□□ -1.36
KPNB1-209	ENST00000580158	SLC9A9	Q8IVB4	645 aa		6.53	□□□□□ -1.36
KPNB1-209	ENST00000580158	SLC41A1	Q8IVJ1	513 aa		6.53	□□□□□ -1.36
KPNB1-209	ENST00000580158	ALLC	Q8N6M5	410 aa		6.53	□□□□□ -1.36
KPNB1-209	ENST00000580158	SLC5A5	Q92911	643 aa		6.53	□□□□□ -1.36
KPNB1-209	ENST00000580158	SLC30A3	Q99726	388 aa		6.53	□□□□□ -1.36
KPNB1-209	ENST00000580158	MDFI	Q99750	246 aa		6.53	□□□□□ -1.36
KPNB1-209	ENST00000580158	SLC46A2	Q9BY10	475 aa		6.53	□□□□□ -1.36
KPNB1-209	ENST00000580158	DNAJC25	Q9H1X3	360 aa		6.53	□□□□□ -1.36
KPNB1-209	ENST00000580158	CPNE5	Q9HCH3	593 aa		6.53	□□□□□ -1.36
KPNB1-209	ENST00000580158	TDP1	Q9NUW8	608 aa		6.53	□□□□□ -1.36
KPNB1-209	ENST00000580158	DUS2	Q9NX74	493 aa	Known RBP	6.53	□□□□□ -1.36
KPNB1-209	ENST00000580158	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	6.53	□□□□□ -1.36
KPNB1-209	ENST00000580158	ANKRD17	O75179	2603 aa	Known RBP	6.53	□□□□□ -1.36
KPNB1-209	ENST00000580158	MYMK	A6NI61	221 aa		6.52	□□□□□ -1.37
KPNB1-209	ENST00000580158	FAM229A	H3BQW9	127 aa		6.52	□□□□□ -1.37
KPNB1-209	ENST00000580158	B4GALT5	O43286	388 aa		6.52	□□□□□ -1.37
KPNB1-209	ENST00000580158	IGFBP6	P24592	240 aa	Predicted RBP	6.52	□□□□□ -1.37
KPNB1-209	ENST00000580158	QARS	P47897	775 aa	Known RBP	6.52	□□□□□ -1.37
KPNB1-209	ENST00000580158	MYO1E	Q12965	1108 aa		6.52	□□□□□ -1.37
KPNB1-209	ENST00000580158	TARDBP	Q13148	414 aa	Known RBP eCLIP	6.52	□□□□□ -1.37	9e-16	■■■■■ 27.7
KPNB1-209	ENST00000580158	NCOA4	Q13772	614 aa		6.52	□□□□□ -1.37
KPNB1-209	ENST00000580158	INAVA	Q3KP66	663 aa		6.52	□□□□□ -1.37
KPNB1-209	ENST00000580158	TBC1D25	Q3MII6	688 aa		6.52	□□□□□ -1.37
KPNB1-209	ENST00000580158	XKR9	Q5GH70	373 aa		6.52	□□□□□ -1.37
KPNB1-209	ENST00000580158	GLRA4	Q5JXX5	417 aa		6.52	□□□□□ -1.37
KPNB1-209	ENST00000580158	TBCEL	Q5QJ74	424 aa		6.52	□□□□□ -1.37
KPNB1-209	ENST00000580158	ANKRD45	Q5TZF3	282 aa		6.52	□□□□□ -1.37
KPNB1-209	ENST00000580158	PPP4R3A	Q6IN85	833 aa		6.52	□□□□□ -1.37
KPNB1-209	ENST00000580158	CD300LG	Q6UXG3	332 aa		6.52	□□□□□ -1.37
KPNB1-209	ENST00000580158	SYNE3	Q6ZMZ3	975 aa		6.52	□□□□□ -1.37
KPNB1-209	ENST00000580158	TMTC3	Q6ZXV5	915 aa		6.52	□□□□□ -1.37
KPNB1-209	ENST00000580158	MAB21L3	Q8N8X9	362 aa		6.52	□□□□□ -1.37
KPNB1-209	ENST00000580158	FANCB	Q8NB91	859 aa		6.52	□□□□□ -1.37
KPNB1-209	ENST00000580158	C3orf58	Q8NDZ4	430 aa		6.52	□□□□□ -1.37
KPNB1-209	ENST00000580158	TTC16	Q8NEE8	873 aa		6.52	□□□□□ -1.37
KPNB1-209	ENST00000580158	EXOC6	Q8TAG9	804 aa		6.52	□□□□□ -1.37
KPNB1-209	ENST00000580158	OSCP1	Q8WVF1	389 aa		6.52	□□□□□ -1.37
KPNB1-209	ENST00000580158	USP13	Q92995	863 aa	Predicted RBP	6.52	□□□□□ -1.37
KPNB1-209	ENST00000580158	LENG9	Q96B70	501 aa		6.52	□□□□□ -1.37
KPNB1-209	ENST00000580158	LIN37	Q96GY3	246 aa	Predicted RBP	6.52	□□□□□ -1.37
KPNB1-209	ENST00000580158	ZNF419	Q96HQ0	510 aa	Predicted RBP	6.52	□□□□□ -1.37
KPNB1-209	ENST00000580158	NAF1	Q96HR8	494 aa	Known RBP	6.52	□□□□□ -1.37
KPNB1-209	ENST00000580158	CCDC136	Q96JN2	1154 aa		6.52	□□□□□ -1.37
KPNB1-209	ENST00000580158	PRIMPOL	Q96LW4	560 aa		6.52	□□□□□ -1.37
KPNB1-209	ENST00000580158	CEP63	Q96MT8	703 aa		6.52	□□□□□ -1.37
KPNB1-209	ENST00000580158	PGLYRP2	Q96PD5	576 aa		6.52	□□□□□ -1.37
KPNB1-209	ENST00000580158	MTA3	Q9BTC8	594 aa		6.52	□□□□□ -1.37
KPNB1-209	ENST00000580158	NFKBIZ	Q9BYH8	718 aa		6.52	□□□□□ -1.37
KPNB1-209	ENST00000580158	LRRC4C	Q9HCJ2	640 aa		6.52	□□□□□ -1.37
KPNB1-209	ENST00000580158	GPRC5C	Q9NQ84	441 aa		6.52	□□□□□ -1.37
KPNB1-209	ENST00000580158	SLC38A7	Q9NVC3	462 aa		6.52	□□□□□ -1.37
KPNB1-209	ENST00000580158	PRMT7	Q9NVM4	692 aa	Predicted RBP	6.52	□□□□□ -1.37
KPNB1-209	ENST00000580158	BARHL2	Q9NY43	387 aa		6.52	□□□□□ -1.37
KPNB1-209	ENST00000580158	GDA	Q9Y2T3	454 aa		6.52	□□□□□ -1.37
KPNB1-209	ENST00000580158	STARD13	Q9Y3M8	1113 aa		6.52	□□□□□ -1.37
KPNB1-209	ENST00000580158	SLC12A7	Q9Y666	1083 aa		6.52	□□□□□ -1.37
KPNB1-209	ENST00000580158	ANAPC1	Q9H1A4	1944 aa		6.52	□□□□□ -1.37
KPNB1-209	ENST00000580158	IGHV1OR15-9	A0A0B4J2B8	117 aa		6.51	□□□□□ -1.37
KPNB1-209	ENST00000580158	MEI4	A8MW99	385 aa		6.51	□□□□□ -1.37
KPNB1-209	ENST00000580158	C9orf172	C9J069	976 aa		6.51	□□□□□ -1.37

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