RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 HECTD3Q5T447 861 aa6.93□□□□□ -1.3
TRAF4-213ENST00000578917 PPP1R26Q5T8A7 1209 aaPredicted RBP6.93□□□□□ -1.3
TRAF4-213ENST00000578917 POTEHQ6S545 545 aa6.93□□□□□ -1.3
TRAF4-213ENST00000578917 TMEM270Q6UE05 265 aa6.93□□□□□ -1.3
TRAF4-213ENST00000578917 GBP6Q6ZN66 633 aa6.93□□□□□ -1.3
TRAF4-213ENST00000578917 PAQR9Q6ZVX9 377 aa6.93□□□□□ -1.3
TRAF4-213ENST00000578917 RRAGAQ7L523 313 aa6.93□□□□□ -1.3
TRAF4-213ENST00000578917 TMEM150AQ86TG1 271 aa6.93□□□□□ -1.3
TRAF4-213ENST00000578917 TRIM59Q8IWR1 403 aa6.93□□□□□ -1.3
TRAF4-213ENST00000578917 TMEM105Q8N8V8 129 aa6.93□□□□□ -1.3
TRAF4-213ENST00000578917 DTWD2Q8NBA8 298 aa6.93□□□□□ -1.3
TRAF4-213ENST00000578917 SLC4A11Q8NBS3 891 aa6.93□□□□□ -1.3
TRAF4-213ENST00000578917 SH3RF2Q8TEC5 729 aa6.93□□□□□ -1.3
TRAF4-213ENST00000578917 FAM3CQ92520 227 aa6.93□□□□□ -1.3
TRAF4-213ENST00000578917 EXOC4Q96A65 974 aa6.93□□□□□ -1.3
TRAF4-213ENST00000578917 RSPRY1Q96DX4 576 aa6.93□□□□□ -1.3
TRAF4-213ENST00000578917 CNOT6LQ96LI5 555 aaKnown RBP6.93□□□□□ -1.3
TRAF4-213ENST00000578917 TWNKQ96RR1 684 aa6.93□□□□□ -1.3
TRAF4-213ENST00000578917 SMOQ99835 787 aa6.93□□□□□ -1.3
TRAF4-213ENST00000578917 CRACR2AQ9BSW2 395 aa6.93□□□□□ -1.3
TRAF4-213ENST00000578917 DUSP16Q9BY84 665 aa6.93□□□□□ -1.3
TRAF4-213ENST00000578917 INTS2Q9H0H0 1204 aaKnown RBP6.93□□□□□ -1.3
TRAF4-213ENST00000578917 EBF3Q9H4W6 596 aa6.93□□□□□ -1.3
TRAF4-213ENST00000578917 THAP9Q9H5L6 903 aa6.93□□□□□ -1.3
TRAF4-213ENST00000578917 FAM124BQ9H5Z6 455 aaPredicted RBP6.93□□□□□ -1.3
TRAF4-213ENST00000578917 C8orf33Q9H7E9 229 aaPredicted RBP6.93□□□□□ -1.3
TRAF4-213ENST00000578917 KIF9Q9HAQ2 790 aa6.93□□□□□ -1.3
TRAF4-213ENST00000578917 TLR8Q9NR97 1041 aaKnown RBP6.93□□□□□ -1.3
TRAF4-213ENST00000578917 SPATA6Q9NWH7 488 aaPredicted RBP6.93□□□□□ -1.3
TRAF4-213ENST00000578917 COMMD8Q9NX08 183 aa6.93□□□□□ -1.3
TRAF4-213ENST00000578917 DUS2Q9NX74 493 aaKnown RBP6.93□□□□□ -1.3
TRAF4-213ENST00000578917 SMPD4Q9NXE4 827 aa6.93□□□□□ -1.3
TRAF4-213ENST00000578917 GTSE1Q9NYZ3 720 aa6.93□□□□□ -1.3
TRAF4-213ENST00000578917 CCL26Q9Y258 94 aa6.93□□□□□ -1.3
TRAF4-213ENST00000578917 COQ4Q9Y3A0 265 aa6.93□□□□□ -1.3
TRAF4-213ENST00000578917 VWA8A3KMH1 1905 aa6.93□□□□□ -1.3
TRAF4-213ENST00000578917 SCN1AP35498 2009 aa6.93□□□□□ -1.3
TRAF4-213ENST00000578917 TECTAO75443 2155 aa6.92□□□□□ -1.3
TRAF4-213ENST00000578917 PLXNA3P51805 1871 aa6.92□□□□□ -1.3
TRAF4-213ENST00000578917 SLC9A3R1O14745 358 aaPredicted RBP6.92□□□□□ -1.3
TRAF4-213ENST00000578917 PMM2O15305 246 aa6.92□□□□□ -1.3
TRAF4-213ENST00000578917 GALR2O43603 387 aaPredicted RBP6.92□□□□□ -1.3
TRAF4-213ENST00000578917 BEST1O76090 585 aa6.92□□□□□ -1.3
TRAF4-213ENST00000578917 VDRP11473 427 aa6.92□□□□□ -1.3
TRAF4-213ENST00000578917 PFKLP17858 780 aa6.92□□□□□ -1.3
TRAF4-213ENST00000578917 CDK11BP21127 795 aaKnown RBP6.92□□□□□ -1.3
TRAF4-213ENST00000578917 RAD23BP54727 409 aa6.92□□□□□ -1.3
TRAF4-213ENST00000578917 MFAP3P55082 362 aa6.92□□□□□ -1.3
TRAF4-213ENST00000578917 MCCD1P59942 119 aaPredicted RBP6.92□□□□□ -1.3
TRAF4-213ENST00000578917 TNK2Q07912 1038 aa6.92□□□□□ -1.3
TRAF4-213ENST00000578917 GOLGA8FQ08AF8 430 aa6.92□□□□□ -1.3
TRAF4-213ENST00000578917 GOLGA8DPQ0D2H9 430 aa6.92□□□□□ -1.3
TRAF4-213ENST00000578917 RUNX3Q13761 415 aa6.92□□□□□ -1.3
TRAF4-213ENST00000578917 ZNF268Q14587 947 aaPredicted RBP6.92□□□□□ -1.3
TRAF4-213ENST00000578917 MTF1Q14872 753 aa6.92□□□□□ -1.3
TRAF4-213ENST00000578917 EXOC3L4Q17RC7 722 aa6.92□□□□□ -1.3
TRAF4-213ENST00000578917 GOLGA7BQ2TAP0 167 aa6.92□□□□□ -1.3
TRAF4-213ENST00000578917 CT47A1Q5JQC4 288 aaPredicted RBP6.92□□□□□ -1.3
TRAF4-213ENST00000578917 C10orf120Q5SQS8 335 aa6.92□□□□□ -1.3
TRAF4-213ENST00000578917 C1orf228Q6PIY5 440 aa6.92□□□□□ -1.3
TRAF4-213ENST00000578917 RSRC2Q7L4I2 434 aaKnown RBP6.92□□□□□ -1.3
TRAF4-213ENST00000578917 TADA2BQ86TJ2 420 aa6.92□□□□□ -1.3
TRAF4-213ENST00000578917 RALGPS2Q86X27 583 aaPredicted RBP6.92□□□□□ -1.3
TRAF4-213ENST00000578917 DDX42Q86XP3 938 aaKnown RBP eCLIP6.92□□□□□ -1.3
TRAF4-213ENST00000578917 CPA6Q8N4T0 437 aa6.92□□□□□ -1.3
TRAF4-213ENST00000578917 ANKRD52Q8NB46 1076 aa6.92□□□□□ -1.3
TRAF4-213ENST00000578917 ANKRD20A12PQ8NF67 263 aa6.92□□□□□ -1.3
TRAF4-213ENST00000578917 PJA1Q8NG27 643 aa6.92□□□□□ -1.3
TRAF4-213ENST00000578917 GPT2Q8TD30 523 aa6.92□□□□□ -1.3
TRAF4-213ENST00000578917 WHAMMQ8TF30 809 aa6.92□□□□□ -1.3
TRAF4-213ENST00000578917 OVCA2Q8WZ82 227 aa6.92□□□□□ -1.3
TRAF4-213ENST00000578917 LRRC3BQ96PB8 259 aa6.92□□□□□ -1.3
TRAF4-213ENST00000578917 SLC22A12Q96S37 553 aa6.92□□□□□ -1.3
TRAF4-213ENST00000578917 TTLL2Q9BWV7 592 aa6.92□□□□□ -1.3
TRAF4-213ENST00000578917 RNF38Q9H0F5 515 aa6.92□□□□□ -1.3
TRAF4-213ENST00000578917 LMAN1LQ9HAT1 526 aa6.92□□□□□ -1.3
TRAF4-213ENST00000578917 LRRC4Q9HBW1 653 aa6.92□□□□□ -1.3
TRAF4-213ENST00000578917 CSNK1G1Q9HCP0 422 aa6.92□□□□□ -1.3
TRAF4-213ENST00000578917 LTB4R2Q9NPC1 389 aa6.92□□□□□ -1.3
TRAF4-213ENST00000578917 TRPV5Q9NQA5 729 aa6.92□□□□□ -1.3
TRAF4-213ENST00000578917 ANO10Q9NW15 660 aa6.92□□□□□ -1.3
TRAF4-213ENST00000578917 GMIPQ9P107 970 aa6.92□□□□□ -1.3
TRAF4-213ENST00000578917 GCNT4Q9P109 453 aa6.92□□□□□ -1.3
TRAF4-213ENST00000578917 CFAP97Q9P2B7 532 aa6.92□□□□□ -1.3
TRAF4-213ENST00000578917 NAGPAQ9UK23 515 aa6.92□□□□□ -1.3
TRAF4-213ENST00000578917 MTF2Q9Y483 593 aaPredicted RBP6.92□□□□□ -1.3
TRAF4-213ENST00000578917 ARIH1Q9Y4X5 557 aaPredicted RBP6.92□□□□□ -1.3
TRAF4-213ENST00000578917 CPQQ9Y646 472 aa6.92□□□□□ -1.3
TRAF4-213ENST00000578917 CACNA1HO95180 2353 aa6.92□□□□□ -1.3
TRAF4-213ENST00000578917 MYO10Q9HD67 2058 aa6.91□□□□□ -1.3
TRAF4-213ENST00000578917 KCNJ18B7U540 433 aa6.91□□□□□ -1.3
TRAF4-213ENST00000578917 SPECC1L-ADORA2AF8WAN1 911 aa6.91□□□□□ -1.3
TRAF4-213ENST00000578917 LEFTY2O00292 366 aa6.91□□□□□ -1.3
TRAF4-213ENST00000578917 TNFRSF10BO14763 440 aa6.91□□□□□ -1.3
TRAF4-213ENST00000578917 SCAMP3O14828 347 aaKnown RBP6.91□□□□□ -1.3
TRAF4-213ENST00000578917 COCHO43405 550 aa6.91□□□□□ -1.3
TRAF4-213ENST00000578917 LAMTOR5O43504 91 aa6.91□□□□□ -1.3
TRAF4-213ENST00000578917 PAEPP09466 180 aa6.91□□□□□ -1.3
TRAF4-213ENST00000578917 IRF1P10914 325 aa6.91□□□□□ -1.3
TRAF4-213ENST00000578917 RALAP11233 206 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms