RNA–Protein interactions for RNA: ENST00000578700.5

SS18-210, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-210ENST00000578700 FZD5Q13467 585 aa10.8□□□□□ -0.68
SS18-210ENST00000578700 SLC5A9Q2M3M2 681 aa10.8□□□□□ -0.68
SS18-210ENST00000578700 ZACNQ401N2 412 aa10.8□□□□□ -0.68
SS18-210ENST00000578700 PPM1JQ5JR12 505 aa10.8□□□□□ -0.68
SS18-210ENST00000578700 GLRA4Q5JXX5 417 aa10.8□□□□□ -0.68
SS18-210ENST00000578700 SMYD5Q6GMV2 418 aa10.8□□□□□ -0.68
SS18-210ENST00000578700 DPY19L2P1Q6NXN4 242 aa10.8□□□□□ -0.68
SS18-210ENST00000578700 CRELD2Q6UXH1 353 aaPredicted RBP10.8□□□□□ -0.68
SS18-210ENST00000578700 CD302Q8IX05 232 aa10.8□□□□□ -0.68
SS18-210ENST00000578700 RNF10Q8N5U6 811 aaKnown RBP10.8□□□□□ -0.68
SS18-210ENST00000578700 TRIM58Q8NG06 486 aa10.8□□□□□ -0.68
SS18-210ENST00000578700 NOX5Q96PH1 765 aa10.8□□□□□ -0.68
SS18-210ENST00000578700 NAPGQ99747 312 aaPredicted RBP10.8□□□□□ -0.68
SS18-210ENST00000578700 CORO1BQ9BR76 489 aa10.8□□□□□ -0.68
SS18-210ENST00000578700 CDT1Q9H211 546 aa10.8□□□□□ -0.68
SS18-210ENST00000578700 ASB7Q9H672 318 aa10.8□□□□□ -0.68
SS18-210ENST00000578700 ZFP14Q9HCL3 533 aa10.8□□□□□ -0.68
SS18-210ENST00000578700 PTPRHQ9HD43 1115 aa10.8□□□□□ -0.68
SS18-210ENST00000578700 TOPORSQ9NS56 1045 aaPredicted RBP10.8□□□□□ -0.68
SS18-210ENST00000578700 SEPT11Q9NVA2 429 aaKnown RBP10.8□□□□□ -0.68
SS18-210ENST00000578700 ADAMTS1Q9UHI8 967 aa10.8□□□□□ -0.68
SS18-210ENST00000578700 CEP295Q9C0D2 2601 aa10.8□□□□□ -0.68
SS18-210ENST00000578700 CACNA1GO43497 2377 aa10.79□□□□□ -0.68
SS18-210ENST00000578700 FOXN3O00409 490 aaPredicted RBP10.79□□□□□ -0.68
SS18-210ENST00000578700 MAN2B1O00754 1011 aa10.79□□□□□ -0.68
SS18-210ENST00000578700 PRRG1O14668 218 aa10.79□□□□□ -0.68
SS18-210ENST00000578700 PJA2O43164 708 aa10.79□□□□□ -0.68
SS18-210ENST00000578700 C4BPAP04003 597 aaKnown RBP10.79□□□□□ -0.68
SS18-210ENST00000578700 ADRB1P08588 477 aa10.79□□□□□ -0.68
SS18-210ENST00000578700 KRT5P13647 590 aa10.79□□□□□ -0.68
SS18-210ENST00000578700 TKTP29401 623 aaKnown RBP10.79□□□□□ -0.68
SS18-210ENST00000578700 ARHGAP25P42331 645 aa10.79□□□□□ -0.68
SS18-210ENST00000578700 BRCC3P46736 316 aa10.79□□□□□ -0.68
SS18-210ENST00000578700 RPS9P46781 194 aaKnown RBP10.79□□□□□ -0.68
SS18-210ENST00000578700 PDE6CP51160 858 aa10.79□□□□□ -0.68
SS18-210ENST00000578700 CLCNKBP51801 687 aa10.79□□□□□ -0.68
SS18-210ENST00000578700 OSTNP61366 133 aa10.79□□□□□ -0.68
SS18-210ENST00000578700 YWHAEP62258 255 aaKnown RBP10.79□□□□□ -0.68
SS18-210ENST00000578700 TFAMQ00059 246 aaKnown RBP10.79□□□□□ -0.68
SS18-210ENST00000578700 NCOA4Q13772 614 aa10.79□□□□□ -0.68
SS18-210ENST00000578700 PPP2R5DQ14738 602 aa10.79□□□□□ -0.68
SS18-210ENST00000578700 NAB2Q15742 525 aa10.79□□□□□ -0.68
SS18-210ENST00000578700 SGSM1Q2NKQ1 1148 aa10.79□□□□□ -0.68
SS18-210ENST00000578700 ASTE1Q2TB18 679 aaPredicted RBP10.79□□□□□ -0.68
SS18-210ENST00000578700 SEZ6Q53EL9 994 aa10.79□□□□□ -0.68
SS18-210ENST00000578700 TDRD10Q5VZ19 366 aaKnown RBP10.79□□□□□ -0.68
SS18-210ENST00000578700 LMBRD2Q68DH5 695 aaPredicted RBP10.79□□□□□ -0.68
SS18-210ENST00000578700 ALKBH5Q6P6C2 394 aaKnown RBP10.79□□□□□ -0.68
SS18-210ENST00000578700 GPIHBP1Q8IV16 184 aa10.79□□□□□ -0.68
SS18-210ENST00000578700 ARHGEF19Q8IW93 802 aa10.79□□□□□ -0.68
SS18-210ENST00000578700 CELF5Q8N6W0 485 aaKnown RBP10.79□□□□□ -0.68
SS18-210ENST00000578700 MYRIPQ8NFW9 859 aa10.79□□□□□ -0.68
SS18-210ENST00000578700 FAM3CQ92520 227 aa10.79□□□□□ -0.68
SS18-210ENST00000578700 TAF4BQ92750 862 aa10.79□□□□□ -0.68
SS18-210ENST00000578700 ELSPBP1Q96BH3 223 aa10.79□□□□□ -0.68
SS18-210ENST00000578700 TCEAL4Q96EI5 215 aa10.79□□□□□ -0.68
SS18-210ENST00000578700 ACAP3Q96P50 834 aa10.79□□□□□ -0.68
SS18-210ENST00000578700 TRMT61BQ9BVS5 477 aaKnown RBP10.79□□□□□ -0.68
SS18-210ENST00000578700 HAPLN2Q9GZV7 340 aa10.79□□□□□ -0.68
SS18-210ENST00000578700 PDZD7Q9H5P4 517 aa10.79□□□□□ -0.68
SS18-210ENST00000578700 GOLGA2P5Q9HBQ8 144 aa10.79□□□□□ -0.68
SS18-210ENST00000578700 PRMT8Q9NR22 394 aaPredicted RBP10.79□□□□□ -0.68
SS18-210ENST00000578700 GDE1Q9NZC3 331 aa10.79□□□□□ -0.68
SS18-210ENST00000578700 INTUQ9ULD6 942 aa10.79□□□□□ -0.68
SS18-210ENST00000578700 REXO2Q9Y3B8 237 aaKnown RBP10.79□□□□□ -0.68
SS18-210ENST00000578700 FRYQ5TBA9 3013 aa10.79□□□□□ -0.68
SS18-210ENST00000578700 A0A087X0T9 212 aa10.78□□□□□ -0.68
SS18-210ENST00000578700 MACROD2A1Z1Q3 448 aa10.78□□□□□ -0.68
SS18-210ENST00000578700 RIOK3O14730 519 aaKnown RBP10.78□□□□□ -0.68
SS18-210ENST00000578700 EDN1P05305 212 aa10.78□□□□□ -0.68
SS18-210ENST00000578700 H2AFZP0C0S5 128 aa10.78□□□□□ -0.68
SS18-210ENST00000578700 FAM228BP0C875 321 aa10.78□□□□□ -0.68
SS18-210ENST00000578700 P4HA1P13674 534 aa10.78□□□□□ -0.68
SS18-210ENST00000578700 FGFR3P22607 806 aa10.78□□□□□ -0.68
SS18-210ENST00000578700 GDI1P31150 447 aa10.78□□□□□ -0.68
SS18-210ENST00000578700 TNFSF9P41273 254 aa10.78□□□□□ -0.68
SS18-210ENST00000578700 SRSF5Q13243 272 aaKnown RBP10.78□□□□□ -0.68
SS18-210ENST00000578700 SIM2Q14190 667 aaPredicted RBP10.78□□□□□ -0.68
SS18-210ENST00000578700 FAM78AQ5JUQ0 283 aa10.78□□□□□ -0.68
SS18-210ENST00000578700 EEF1DP3Q658K8 133 aa10.78□□□□□ -0.68
SS18-210ENST00000578700 HEATR6Q6AI08 1181 aaKnown RBP10.78□□□□□ -0.68
SS18-210ENST00000578700 H2AFVQ71UI9 128 aa10.78□□□□□ -0.68
SS18-210ENST00000578700 TRAPPC11Q7Z392 1133 aa10.78□□□□□ -0.68
SS18-210ENST00000578700 ZNF571Q7Z3V5 609 aaPredicted RBP10.78□□□□□ -0.68
SS18-210ENST00000578700 NT5DC4Q86YG4 428 aa10.78□□□□□ -0.68
SS18-210ENST00000578700 FAM71AQ8IYT1 594 aa10.78□□□□□ -0.68
SS18-210ENST00000578700 SLC35F6Q8N357 371 aa10.78□□□□□ -0.68
SS18-210ENST00000578700 MNS1Q8NEH6 495 aa10.78□□□□□ -0.68
SS18-210ENST00000578700 CTNNBL1Q8WYA6 563 aaPredicted RBP10.78□□□□□ -0.68
SS18-210ENST00000578700 SHC3Q92529 594 aa10.78□□□□□ -0.68
SS18-210ENST00000578700 ZNF516Q92618 1163 aa10.78□□□□□ -0.68
SS18-210ENST00000578700 NELL1Q92832 810 aa10.78□□□□□ -0.68
SS18-210ENST00000578700 SEMA4DQ92854 862 aa10.78□□□□□ -0.68
SS18-210ENST00000578700 CALR3Q96L12 384 aaKnown RBP10.78□□□□□ -0.68
SS18-210ENST00000578700 AGPAT1Q99943 283 aa10.78□□□□□ -0.68
SS18-210ENST00000578700 FAM126AQ9BYI3 521 aaPredicted RBP10.78□□□□□ -0.68
SS18-210ENST00000578700 PDCL3Q9H2J4 239 aa10.78□□□□□ -0.68
SS18-210ENST00000578700 CYP4F11Q9HBI6 524 aa10.78□□□□□ -0.68
SS18-210ENST00000578700 MTRRQ9UBK8 725 aa10.78□□□□□ -0.68
SS18-210ENST00000578700 NAGPAQ9UK23 515 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms