RNA–Protein interactions for RNA: ENST00000578525.5

CDK5RAP3-208, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 564 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-208ENST00000578525 PDK2Q15119 407 aa9.77□□□□□ -0.85
CDK5RAP3-208ENST00000578525 TAF5Q15542 800 aa9.77□□□□□ -0.85
CDK5RAP3-208ENST00000578525 PKN2Q16513 984 aaKnown RBP9.77□□□□□ -0.85
CDK5RAP3-208ENST00000578525 DGKDQ16760 1214 aa9.77□□□□□ -0.85
CDK5RAP3-208ENST00000578525 SPRED3Q2MJR0 410 aa9.77□□□□□ -0.85
CDK5RAP3-208ENST00000578525 KLHL38Q2WGJ6 581 aa9.77□□□□□ -0.85
CDK5RAP3-208ENST00000578525 PKDCCQ504Y2 493 aa9.77□□□□□ -0.85
CDK5RAP3-208ENST00000578525 FBXW10Q5XX13 1052 aa9.77□□□□□ -0.85
CDK5RAP3-208ENST00000578525 ARHGAP17Q68EM7 881 aa9.77□□□□□ -0.85
CDK5RAP3-208ENST00000578525 CHADLQ6NUI6 762 aa9.77□□□□□ -0.85
CDK5RAP3-208ENST00000578525 SLC27A1Q6PCB7 646 aa9.77□□□□□ -0.85
CDK5RAP3-208ENST00000578525 DARS2Q6PI48 645 aaKnown RBP9.77□□□□□ -0.85
CDK5RAP3-208ENST00000578525 CATSPER4Q7RTX7 472 aa9.77□□□□□ -0.85
CDK5RAP3-208ENST00000578525 GPR142Q7Z601 462 aa9.77□□□□□ -0.85
CDK5RAP3-208ENST00000578525 PLEKHH3Q7Z736 793 aa9.77□□□□□ -0.85
CDK5RAP3-208ENST00000578525 DPP9Q86TI2 863 aa9.77□□□□□ -0.85
CDK5RAP3-208ENST00000578525 SESTD1Q86VW0 696 aa9.77□□□□□ -0.85
CDK5RAP3-208ENST00000578525 UNC93AQ86WB7 457 aa9.77□□□□□ -0.85
CDK5RAP3-208ENST00000578525 ANKMY2Q8IV38 441 aa9.77□□□□□ -0.85
CDK5RAP3-208ENST00000578525 SUGP1Q8IWZ8 645 aaKnown RBP9.77□□□□□ -0.85
CDK5RAP3-208ENST00000578525 LRRC52Q8N7C0 313 aa9.77□□□□□ -0.85
CDK5RAP3-208ENST00000578525 BRI3BPQ8WY22 251 aa9.77□□□□□ -0.85
CDK5RAP3-208ENST00000578525 MAML3Q96JK9 1138 aa9.77□□□□□ -0.85
CDK5RAP3-208ENST00000578525 MS4A4AQ96JQ5 239 aa9.77□□□□□ -0.85
CDK5RAP3-208ENST00000578525 TGS1Q96RS0 853 aaKnown RBP9.77□□□□□ -0.85
CDK5RAP3-208ENST00000578525 MRPL45Q9BRJ2 306 aaKnown RBP9.77□□□□□ -0.85
CDK5RAP3-208ENST00000578525 CALN1Q9BXU9 219 aa9.77□□□□□ -0.85
CDK5RAP3-208ENST00000578525 SLC4A5Q9BY07 1137 aa9.77□□□□□ -0.85
CDK5RAP3-208ENST00000578525 ABHD16BQ9H3Z7 469 aa9.77□□□□□ -0.85
CDK5RAP3-208ENST00000578525 C10orf88Q9H8K7 445 aa9.77□□□□□ -0.85
CDK5RAP3-208ENST00000578525 SLC40A1Q9NP59 571 aa9.77□□□□□ -0.85
CDK5RAP3-208ENST00000578525 MLXIPLQ9NP71 852 aa9.77□□□□□ -0.85
CDK5RAP3-208ENST00000578525 SSU72Q9NP77 194 aaKnown RBP9.77□□□□□ -0.85
CDK5RAP3-208ENST00000578525 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.77□□□□□ -0.85
CDK5RAP3-208ENST00000578525 FGFR1OP2Q9NVK5 253 aa9.77□□□□□ -0.85
CDK5RAP3-208ENST00000578525 TMEM51Q9NW97 253 aa9.77□□□□□ -0.85
CDK5RAP3-208ENST00000578525 SNTG2Q9NY99 539 aa9.77□□□□□ -0.85
CDK5RAP3-208ENST00000578525 PSMC3IPQ9P2W1 217 aaPredicted RBP9.77□□□□□ -0.85
CDK5RAP3-208ENST00000578525 SAE1Q9UBE0 346 aaPredicted RBP9.77□□□□□ -0.85
CDK5RAP3-208ENST00000578525 HESX1Q9UBX0 185 aa9.77□□□□□ -0.85
CDK5RAP3-208ENST00000578525 CLUHO75153 1309 aa9.77□□□□□ -0.85
CDK5RAP3-208ENST00000578525 SCN4AP35499 1836 aa9.77□□□□□ -0.85
CDK5RAP3-208ENST00000578525 SMIM35A0A1B0GVV1 85 aa9.76□□□□□ -0.85
CDK5RAP3-208ENST00000578525 CFAP69A5D8W1 941 aa9.76□□□□□ -0.85
CDK5RAP3-208ENST00000578525 IQCA1LA6NCM1 817 aa9.76□□□□□ -0.85
CDK5RAP3-208ENST00000578525 SLC15A5A6NIM6 579 aa9.76□□□□□ -0.85
CDK5RAP3-208ENST00000578525 ZNF487B1APH4 448 aa9.76□□□□□ -0.85
CDK5RAP3-208ENST00000578525 GOLGA8MH3BSY2 632 aa9.76□□□□□ -0.85
CDK5RAP3-208ENST00000578525 H7C0C1 242 aa9.76□□□□□ -0.85
CDK5RAP3-208ENST00000578525 APOL1O14791 398 aa9.76□□□□□ -0.85
CDK5RAP3-208ENST00000578525 ATP2C2O75185 946 aa9.76□□□□□ -0.85
CDK5RAP3-208ENST00000578525 TMEM63AO94886 807 aa9.76□□□□□ -0.85
CDK5RAP3-208ENST00000578525 KRT15P19012 456 aa9.76□□□□□ -0.85
CDK5RAP3-208ENST00000578525 TAC1P20366 129 aa9.76□□□□□ -0.85
CDK5RAP3-208ENST00000578525 AXLP30530 894 aa9.76□□□□□ -0.85
CDK5RAP3-208ENST00000578525 STIP1P31948 543 aaKnown RBP9.76□□□□□ -0.85
CDK5RAP3-208ENST00000578525 SCNN1AP37088 669 aa9.76□□□□□ -0.85
CDK5RAP3-208ENST00000578525 ATP5OP48047 213 aa9.76□□□□□ -0.85
CDK5RAP3-208ENST00000578525 RGS7P49802 495 aa9.76□□□□□ -0.85
CDK5RAP3-208ENST00000578525 GEMIN4P57678 1058 aaKnown RBP9.76□□□□□ -0.85
CDK5RAP3-208ENST00000578525 SLC6A3Q01959 620 aa9.76□□□□□ -0.85
CDK5RAP3-208ENST00000578525 CBLBQ13191 982 aa9.76□□□□□ -0.85
CDK5RAP3-208ENST00000578525 MMRN1Q13201 1228 aa9.76□□□□□ -0.85
CDK5RAP3-208ENST00000578525 SPARCL1Q14515 664 aa9.76□□□□□ -0.85
CDK5RAP3-208ENST00000578525 PCBP1Q15365 356 aaKnown RBP eCLIP9.76□□□□□ -0.85
CDK5RAP3-208ENST00000578525 ZBTB6Q15916 424 aa9.76□□□□□ -0.85
CDK5RAP3-208ENST00000578525 KIZQ2M2Z5 673 aa9.76□□□□□ -0.85
CDK5RAP3-208ENST00000578525 C15orf59Q2T9L4 293 aaPredicted RBP9.76□□□□□ -0.85
CDK5RAP3-208ENST00000578525 CCDC14Q49A88 953 aa9.76□□□□□ -0.85
CDK5RAP3-208ENST00000578525 BOLA3Q53S33 107 aa9.76□□□□□ -0.85
CDK5RAP3-208ENST00000578525 HP1BP3Q5SSJ5 553 aaPredicted RBP9.76□□□□□ -0.85
CDK5RAP3-208ENST00000578525 FNBP1LQ5T0N5 605 aa9.76□□□□□ -0.85
CDK5RAP3-208ENST00000578525 PPP1R26Q5T8A7 1209 aaPredicted RBP9.76□□□□□ -0.85
CDK5RAP3-208ENST00000578525 NUGGCQ68CJ6 796 aa9.76□□□□□ -0.85
CDK5RAP3-208ENST00000578525 OLFML1Q6UWY5 402 aa9.76□□□□□ -0.85
CDK5RAP3-208ENST00000578525 NPNTQ6UXI9 565 aa9.76□□□□□ -0.85
CDK5RAP3-208ENST00000578525 CAPN12Q6ZSI9 719 aa9.76□□□□□ -0.85
CDK5RAP3-208ENST00000578525 TRPM8Q7Z2W7 1104 aa9.76□□□□□ -0.85
CDK5RAP3-208ENST00000578525 SPATA21Q7Z572 469 aa9.76□□□□□ -0.85
CDK5RAP3-208ENST00000578525 ACOT1Q86TX2 421 aa9.76□□□□□ -0.85
CDK5RAP3-208ENST00000578525 TTC30AQ86WT1 665 aa9.76□□□□□ -0.85
CDK5RAP3-208ENST00000578525 VSIG1Q86XK7 387 aa9.76□□□□□ -0.85
CDK5RAP3-208ENST00000578525 ZDHHC17Q8IUH5 632 aa9.76□□□□□ -0.85
CDK5RAP3-208ENST00000578525 MAP7D3Q8IWC1 876 aa9.76□□□□□ -0.85
CDK5RAP3-208ENST00000578525 FAM71DQ8N9W8 422 aa9.76□□□□□ -0.85
CDK5RAP3-208ENST00000578525 SPATA18Q8TC71 538 aa9.76□□□□□ -0.85
CDK5RAP3-208ENST00000578525 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.76□□□□□ -0.85
CDK5RAP3-208ENST00000578525 DENND1AQ8TEH3 1009 aa9.76□□□□□ -0.85
CDK5RAP3-208ENST00000578525 STK32AQ8WU08 396 aa9.76□□□□□ -0.85
CDK5RAP3-208ENST00000578525 PYROXD1Q8WU10 500 aa9.76□□□□□ -0.85
CDK5RAP3-208ENST00000578525 GRAMD1AQ96CP6 724 aa9.76□□□□□ -0.85
CDK5RAP3-208ENST00000578525 RNF157Q96PX1 679 aa9.76□□□□□ -0.85
CDK5RAP3-208ENST00000578525 SMC6Q96SB8 1091 aa9.76□□□□□ -0.85
CDK5RAP3-208ENST00000578525 TBCBQ99426 244 aa9.76□□□□□ -0.85
CDK5RAP3-208ENST00000578525 PARK7Q99497 189 aaKnown RBP9.76□□□□□ -0.85
CDK5RAP3-208ENST00000578525 TINF2Q9BSI4 451 aa9.76□□□□□ -0.85
CDK5RAP3-208ENST00000578525 DHRS4Q9BTZ2 278 aa9.76□□□□□ -0.85
CDK5RAP3-208ENST00000578525 ACSS3Q9H6R3 686 aa9.76□□□□□ -0.85
CDK5RAP3-208ENST00000578525 PCDH18Q9HCL0 1135 aa9.76□□□□□ -0.85
CDK5RAP3-208ENST00000578525 SETD4Q9NVD3 440 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms