RNA–Protein interactions for RNA: ENST00000578415.1

TSEN54-205, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 994 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-205ENST00000578415 EHD2Q9NZN4 543 aa22.38■■□□□ 1.17
TSEN54-205ENST00000578415 MORC2Q9Y6X9 1032 aaPredicted RBP22.38■■□□□ 1.17
TSEN54-205ENST00000578415 SGK1O00141 431 aa22.37■■□□□ 1.17
TSEN54-205ENST00000578415 CSRP1P21291 193 aaKnown RBP22.37■■□□□ 1.17
TSEN54-205ENST00000578415 EIF2DP41214 584 aaKnown RBP22.37■■□□□ 1.17
TSEN54-205ENST00000578415 PPP3CCP48454 512 aa22.37■■□□□ 1.17
TSEN54-205ENST00000578415 DHPSP49366 369 aaPredicted RBP22.37■■□□□ 1.17
TSEN54-205ENST00000578415 FOXC1Q12948 553 aa22.37■■□□□ 1.17
TSEN54-205ENST00000578415 TAF10Q12962 218 aa22.37■■□□□ 1.17
TSEN54-205ENST00000578415 RHBDF2Q6PJF5 856 aa22.37■■□□□ 1.17
TSEN54-205ENST00000578415 UNQ6494/PRO21346Q6UXR6 183 aa22.37■■□□□ 1.17
TSEN54-205ENST00000578415 TTC30AQ86WT1 665 aa22.37■■□□□ 1.17
TSEN54-205ENST00000578415 CCDC65Q8IXS2 484 aa22.37■■□□□ 1.17
TSEN54-205ENST00000578415 TXNDC5Q8NBS9 432 aaKnown RBP22.37■■□□□ 1.17
TSEN54-205ENST00000578415 RLN3Q8WXF3 142 aa22.37■■□□□ 1.17
TSEN54-205ENST00000578415 FNBP1Q96RU3 617 aa22.37■■□□□ 1.17
TSEN54-205ENST00000578415 PNKPQ96T60 521 aa22.37■■□□□ 1.17
TSEN54-205ENST00000578415 CFAP97Q9P2B7 532 aa22.37■■□□□ 1.17
TSEN54-205ENST00000578415 SLC9A3R1O14745 358 aaPredicted RBP22.36■■□□□ 1.17
TSEN54-205ENST00000578415 TACC1O75410 805 aa22.36■■□□□ 1.17
TSEN54-205ENST00000578415 KAT7O95251 611 aa22.36■■□□□ 1.17
TSEN54-205ENST00000578415 KLF8O95600 359 aaPredicted RBP22.36■■□□□ 1.17
TSEN54-205ENST00000578415 TOP3BO95985 862 aaKnown RBP22.36■■□□□ 1.17
TSEN54-205ENST00000578415 ABL1P00519 1130 aa22.36■■□□□ 1.17
TSEN54-205ENST00000578415 CST3P01034 146 aaPredicted RBP22.36■■□□□ 1.17
TSEN54-205ENST00000578415 SPINK2P20155 84 aa22.36■■□□□ 1.17
TSEN54-205ENST00000578415 PDCP20941 246 aa22.36■■□□□ 1.17
TSEN54-205ENST00000578415 TIE1P35590 1138 aa22.36■■□□□ 1.17
TSEN54-205ENST00000578415 GNL1P36915 607 aaPredicted RBP22.36■■□□□ 1.17
TSEN54-205ENST00000578415 P2RY2P41231 377 aa22.36■■□□□ 1.17
TSEN54-205ENST00000578415 KIR2DL1P43626 348 aaPredicted RBP22.36■■□□□ 1.17
TSEN54-205ENST00000578415 EMC10Q5UCC4 262 aa22.36■■□□□ 1.17
TSEN54-205ENST00000578415 HS2ST1Q7LGA3 356 aa22.36■■□□□ 1.17
TSEN54-205ENST00000578415 PDILTQ8N807 584 aa22.36■■□□□ 1.17
TSEN54-205ENST00000578415 FRMD1Q8N878 549 aa22.36■■□□□ 1.17
TSEN54-205ENST00000578415 PIGKQ92643 395 aa22.36■■□□□ 1.17
TSEN54-205ENST00000578415 USP28Q96RU2 1077 aa22.36■■□□□ 1.17
TSEN54-205ENST00000578415 TMEM121BQ9BXQ6 578 aaPredicted RBP22.36■■□□□ 1.17
TSEN54-205ENST00000578415 ZNF518BQ9C0D4 1074 aa22.36■■□□□ 1.17
TSEN54-205ENST00000578415 SNX25Q9H3E2 840 aa22.36■■□□□ 1.17
TSEN54-205ENST00000578415 DPEP3Q9H4B8 488 aa22.36■■□□□ 1.17
TSEN54-205ENST00000578415 EVLQ9UI08 416 aaPredicted RBP22.36■■□□□ 1.17
TSEN54-205ENST00000578415 NUP205Q92621 2012 aa22.36■■□□□ 1.17
TSEN54-205ENST00000578415 PTPRDP23468 1912 aa22.35■■□□□ 1.17
TSEN54-205ENST00000578415 A0A0A0MRY4 1105 aa22.35■■□□□ 1.17
TSEN54-205ENST00000578415 ALDH1A2O94788 518 aa22.35■■□□□ 1.17
TSEN54-205ENST00000578415 CEACAM1P13688 526 aa22.35■■□□□ 1.17
TSEN54-205ENST00000578415 SLC39A14Q15043 492 aa22.35■■□□□ 1.17
TSEN54-205ENST00000578415 HSF5Q4G112 596 aaPredicted RBP22.35■■□□□ 1.17
TSEN54-205ENST00000578415 TDRD10Q5VZ19 366 aaKnown RBP22.35■■□□□ 1.17
TSEN54-205ENST00000578415 STXBP4Q6ZWJ1 553 aa22.35■■□□□ 1.17
TSEN54-205ENST00000578415 UPF2Q9HAU5 1272 aaKnown RBP22.35■■□□□ 1.17
TSEN54-205ENST00000578415 KIAA1586Q9HCI6 787 aa22.35■■□□□ 1.17
TSEN54-205ENST00000578415 ZDHHC4Q9NPG8 344 aa22.35■■□□□ 1.17
TSEN54-205ENST00000578415 MBD1Q9UIS9 605 aaPredicted RBP22.35■■□□□ 1.17
TSEN54-205ENST00000578415 ADAM23O75077 832 aa22.34■■□□□ 1.17
TSEN54-205ENST00000578415 APODP05090 189 aa22.34■■□□□ 1.17
TSEN54-205ENST00000578415 DLATP10515 647 aaKnown RBP22.34■■□□□ 1.17
TSEN54-205ENST00000578415 ADH5P11766 374 aa22.34■■□□□ 1.17
TSEN54-205ENST00000578415 PTPN1P18031 435 aaKnown RBP22.34■■□□□ 1.17
TSEN54-205ENST00000578415 SYT1P21579 422 aa22.34■■□□□ 1.17
TSEN54-205ENST00000578415 PTGER3P43115 390 aa22.34■■□□□ 1.17
TSEN54-205ENST00000578415 PHTF2Q8N3S3 785 aa22.34■■□□□ 1.17
TSEN54-205ENST00000578415 OR6B3Q8NGW1 331 aa22.34■■□□□ 1.17
TSEN54-205ENST00000578415 WHAMMQ8TF30 809 aa22.34■■□□□ 1.17
TSEN54-205ENST00000578415 SLITRK1Q96PX8 696 aa22.34■■□□□ 1.17
TSEN54-205ENST00000578415 ELOVL4Q9GZR5 314 aa22.34■■□□□ 1.17
TSEN54-205ENST00000578415 ARHGEF4Q9NR80 690 aa22.34■■□□□ 1.17
TSEN54-205ENST00000578415 TMEM74BQ9NUR3 256 aa22.34■■□□□ 1.17
TSEN54-205ENST00000578415 ZMIZ1Q9ULJ6 1067 aa22.34■■□□□ 1.17
TSEN54-205ENST00000578415 IGF2RP11717 2491 aa22.34■■□□□ 1.17
TSEN54-205ENST00000578415 THADAQ6YHU6 1953 aa22.34■■□□□ 1.17
TSEN54-205ENST00000578415 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa22.33■■□□□ 1.17
TSEN54-205ENST00000578415 CLDN5O00501 218 aa22.33■■□□□ 1.17
TSEN54-205ENST00000578415 TNFRSF10BO14763 440 aa22.33■■□□□ 1.17
TSEN54-205ENST00000578415 EIF3DO15371 548 aaKnown RBP eCLIP22.33■■□□□ 1.17
TSEN54-205ENST00000578415 TGFB1I1O43294 461 aa22.33■■□□□ 1.17
TSEN54-205ENST00000578415 ADH1CP00326 375 aa22.33■■□□□ 1.17
TSEN54-205ENST00000578415 FAM163BP0C2L3 166 aa22.33■■□□□ 1.17
TSEN54-205ENST00000578415 MBL2P11226 248 aaPredicted RBP22.33■■□□□ 1.17
TSEN54-205ENST00000578415 GRIA2P42262 883 aa22.33■■□□□ 1.17
TSEN54-205ENST00000578415 KDSRQ06136 332 aa22.33■■□□□ 1.17
TSEN54-205ENST00000578415 IFRD2Q12894 506 aaPredicted RBP22.33■■□□□ 1.17
TSEN54-205ENST00000578415 E2F4Q16254 413 aa22.33■■□□□ 1.17
TSEN54-205ENST00000578415 SNRNP35Q16560 246 aaKnown RBP22.33■■□□□ 1.17
TSEN54-205ENST00000578415 MAP7D1Q3KQU3 841 aa22.33■■□□□ 1.17
TSEN54-205ENST00000578415 UAP1L1Q3KQV9 507 aa22.33■■□□□ 1.17
TSEN54-205ENST00000578415 TRIM61Q5EBN2 209 aa22.33■■□□□ 1.17
TSEN54-205ENST00000578415 EOGTQ5NDL2 527 aa22.33■■□□□ 1.17
TSEN54-205ENST00000578415 ARMCX6Q7L4S7 300 aa22.33■■□□□ 1.17
TSEN54-205ENST00000578415 LPCAT2Q7L5N7 544 aa22.33■■□□□ 1.17
TSEN54-205ENST00000578415 EPM2AIP1Q7L775 607 aaPredicted RBP22.33■■□□□ 1.17
TSEN54-205ENST00000578415 DDX42Q86XP3 938 aaKnown RBP eCLIP22.33■■□□□ 1.17
TSEN54-205ENST00000578415 TMEFF1Q8IYR6 380 aa22.33■■□□□ 1.17
TSEN54-205ENST00000578415 RDH13Q8NBN7 331 aa22.33■■□□□ 1.17
TSEN54-205ENST00000578415 ZFRQ96KR1 1074 aaKnown RBP22.33■■□□□ 1.17
TSEN54-205ENST00000578415 SPACA7Q96KW9 195 aa22.33■■□□□ 1.17
TSEN54-205ENST00000578415 CGRRF1Q99675 332 aa22.33■■□□□ 1.17
TSEN54-205ENST00000578415 B3GNT5Q9BYG0 378 aa22.33■■□□□ 1.17
TSEN54-205ENST00000578415 TRIM9Q9C026 710 aa22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms