RNA–Protein interactions for RNA: ENST00000578199.5

ERBB2-205, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best) BASIC

Gene ERBB2, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-205ENST00000578199 GSCP56915 257 aaPredicted RBP18.37■□□□□ 0.53
ERBB2-205ENST00000578199 BBS9Q3SYG4 887 aa18.37■□□□□ 0.53
ERBB2-205ENST00000578199 ZC3H12AQ5D1E8 599 aaKnown RBP18.37■□□□□ 0.53
ERBB2-205ENST00000578199 C3orf62Q6ZUJ4 267 aa18.37■□□□□ 0.53
ERBB2-205ENST00000578199 FUKQ8N0W3 1084 aa18.37■□□□□ 0.53
ERBB2-205ENST00000578199 FBXO36Q8NEA4 188 aa18.37■□□□□ 0.53
ERBB2-205ENST00000578199 NT5C1AQ9BXI3 368 aa18.37■□□□□ 0.53
ERBB2-205ENST00000578199 EIF2AQ9BY44 585 aaKnown RBP18.37■□□□□ 0.53
ERBB2-205ENST00000578199 UBN1Q9NPG3 1134 aa18.37■□□□□ 0.53
ERBB2-205ENST00000578199 RABGEF1Q9UJ41 708 aa18.37■□□□□ 0.53
ERBB2-205ENST00000578199 ITGA11Q9UKX5 1188 aa18.37■□□□□ 0.53
ERBB2-205ENST00000578199 UBOX5O94941 541 aa18.37■□□□□ 0.53
ERBB2-205ENST00000578199 CHRM1P11229 460 aaPredicted RBP18.37■□□□□ 0.53
ERBB2-205ENST00000578199 TAC1P20366 129 aa18.37■□□□□ 0.53
ERBB2-205ENST00000578199 INCA1Q0VD86 236 aa18.37■□□□□ 0.53
ERBB2-205ENST00000578199 LDLRAD1Q5T700 205 aa18.37■□□□□ 0.53
ERBB2-205ENST00000578199 CEP128Q6ZU80 1094 aa18.37■□□□□ 0.53
ERBB2-205ENST00000578199 USP50Q70EL3 339 aaPredicted RBP18.37■□□□□ 0.53
ERBB2-205ENST00000578199 TTC30AQ86WT1 665 aa18.37■□□□□ 0.53
ERBB2-205ENST00000578199 C18orf25Q96B23 403 aaPredicted RBP18.37■□□□□ 0.53
ERBB2-205ENST00000578199 MAGEB18Q96M61 343 aa18.37■□□□□ 0.53
ERBB2-205ENST00000578199 MAK16Q9BXY0 300 aaKnown RBP18.37■□□□□ 0.53
ERBB2-205ENST00000578199 VTA1Q9NP79 307 aa18.37■□□□□ 0.53
ERBB2-205ENST00000578199 TUBGCP4Q9UGJ1 667 aa18.37■□□□□ 0.53
ERBB2-205ENST00000578199 KAT6AQ92794 2004 aa18.36■□□□□ 0.53
ERBB2-205ENST00000578199 BTBD19C9JJ37 291 aa18.36■□□□□ 0.53
ERBB2-205ENST00000578199 GHRP10912 638 aa18.36■□□□□ 0.53
ERBB2-205ENST00000578199 DPYSL3Q14195 570 aa18.36■□□□□ 0.53
ERBB2-205ENST00000578199 CCDC14Q49A88 953 aa18.36■□□□□ 0.53
ERBB2-205ENST00000578199 DARS2Q6PI48 645 aaKnown RBP18.36■□□□□ 0.53
ERBB2-205ENST00000578199 LCLAT1Q6UWP7 414 aa18.36■□□□□ 0.53
ERBB2-205ENST00000578199 SPATA21Q7Z572 469 aa18.36■□□□□ 0.53
ERBB2-205ENST00000578199 DPP9Q86TI2 863 aa18.36■□□□□ 0.53
ERBB2-205ENST00000578199 IGDCC3Q8IVU1 814 aa18.36■□□□□ 0.53
ERBB2-205ENST00000578199 FBF1Q8TES7 1133 aa18.36■□□□□ 0.53
ERBB2-205ENST00000578199 CNPY3Q9BT09 278 aa18.36■□□□□ 0.53
ERBB2-205ENST00000578199 MAGEB5Q9BZ81 275 aa18.36■□□□□ 0.53
ERBB2-205ENST00000578199 MIS12Q9H081 205 aa18.36■□□□□ 0.53
ERBB2-205ENST00000578199 C12orf65Q9H3J6 166 aaKnown RBP18.36■□□□□ 0.53
ERBB2-205ENST00000578199 NGRNQ9NPE2 291 aaKnown RBP18.36■□□□□ 0.53
ERBB2-205ENST00000578199 C2CD2Q9Y426 696 aa18.36■□□□□ 0.53
ERBB2-205ENST00000578199 MCF2LO15068 1137 aa18.35■□□□□ 0.53
ERBB2-205ENST00000578199 AVILO75366 819 aa18.35■□□□□ 0.53
ERBB2-205ENST00000578199 TFE3P19532 575 aaPredicted RBP18.35■□□□□ 0.53
ERBB2-205ENST00000578199 HOXA11P31270 313 aaPredicted RBP18.35■□□□□ 0.53
ERBB2-205ENST00000578199 GCLCP48506 637 aaPredicted RBP18.35■□□□□ 0.53
ERBB2-205ENST00000578199 DNAJC3Q13217 504 aa18.35■□□□□ 0.53
ERBB2-205ENST00000578199 DPY19L2Q6NUT2 758 aa18.35■□□□□ 0.53
ERBB2-205ENST00000578199 PCGF5Q86SE9 256 aa18.35■□□□□ 0.53
ERBB2-205ENST00000578199 RIBC1Q8N443 379 aaPredicted RBP18.35■□□□□ 0.53
ERBB2-205ENST00000578199 RMDN2Q96LZ7 410 aa18.35■□□□□ 0.53
ERBB2-205ENST00000578199 APOL6Q9BWW8 343 aa18.35■□□□□ 0.53
ERBB2-205ENST00000578199 ACTL7BQ9Y614 415 aa18.35■□□□□ 0.53
ERBB2-205ENST00000578199 GABBR2O75899 941 aa18.35■□□□□ 0.53
ERBB2-205ENST00000578199 ARL4CP56559 192 aa18.35■□□□□ 0.53
ERBB2-205ENST00000578199 MGAT5Q09328 741 aa18.35■□□□□ 0.53
ERBB2-205ENST00000578199 SLC1A5Q15758 541 aa18.35■□□□□ 0.53
ERBB2-205ENST00000578199 CA9Q16790 459 aa18.35■□□□□ 0.53
ERBB2-205ENST00000578199 CYB5D1Q6P9G0 228 aa18.35■□□□□ 0.53
ERBB2-205ENST00000578199 P3H4Q92791 437 aa18.35■□□□□ 0.53
ERBB2-205ENST00000578199 KLF6Q99612 283 aaPredicted RBP18.35■□□□□ 0.53
ERBB2-205ENST00000578199 DPEP3Q9H4B8 488 aa18.35■□□□□ 0.53
ERBB2-205ENST00000578199 RSAD1Q9HA92 442 aa18.35■□□□□ 0.53
ERBB2-205ENST00000578199 GBA2Q9HCG7 927 aaPredicted RBP18.35■□□□□ 0.53
ERBB2-205ENST00000578199 SLCO1B3Q9NPD5 702 aa18.35■□□□□ 0.53
ERBB2-205ENST00000578199 GJD2Q9UKL4 321 aa18.35■□□□□ 0.53
ERBB2-205ENST00000578199 PNMA3Q9UL41 463 aa18.35■□□□□ 0.53
ERBB2-205ENST00000578199 SLC12A4Q9UP95 1085 aa18.35■□□□□ 0.53
ERBB2-205ENST00000578199 HEY1Q9Y5J3 304 aa18.35■□□□□ 0.53
ERBB2-205ENST00000578199 ZSWIM8A7E2V4 1837 aa18.35■□□□□ 0.53
ERBB2-205ENST00000578199 PLXNB2O15031 1838 aa18.35■□□□□ 0.53
ERBB2-205ENST00000578199 GOLGA8RI6L899 631 aa18.34■□□□□ 0.53
ERBB2-205ENST00000578199 PRPSAP2O60256 369 aa18.34■□□□□ 0.53
ERBB2-205ENST00000578199 SUN1O94901 812 aa18.34■□□□□ 0.53
ERBB2-205ENST00000578199 ASMTLO95671 621 aa18.34■□□□□ 0.53
ERBB2-205ENST00000578199 MMP3P08254 477 aa18.34■□□□□ 0.53
ERBB2-205ENST00000578199 MNAT1P51948 309 aa18.34■□□□□ 0.53
ERBB2-205ENST00000578199 CCNA1P78396 465 aa18.34■□□□□ 0.53
ERBB2-205ENST00000578199 PPP1R21Q6ZMI0 780 aa18.34■□□□□ 0.53
ERBB2-205ENST00000578199 TDRPQ86YL5 185 aa18.34■□□□□ 0.53
ERBB2-205ENST00000578199 CCDC33Q8N5R6 958 aa18.34■□□□□ 0.53
ERBB2-205ENST00000578199 C7orf31Q8N865 590 aa18.34■□□□□ 0.53
ERBB2-205ENST00000578199 DENND1AQ8TEH3 1009 aa18.34■□□□□ 0.53
ERBB2-205ENST00000578199 SMC6Q96SB8 1091 aa18.34■□□□□ 0.53
ERBB2-205ENST00000578199 PITPNM3Q9BZ71 974 aa18.34■□□□□ 0.53
ERBB2-205ENST00000578199 CD248Q9HCU0 757 aa18.34■□□□□ 0.53
ERBB2-205ENST00000578199 CHMP2BQ9UQN3 213 aa18.34■□□□□ 0.53
ERBB2-205ENST00000578199 KRT4P19013 534 aa18.34■□□□□ 0.53
ERBB2-205ENST00000578199 CA4P22748 312 aa18.34■□□□□ 0.53
ERBB2-205ENST00000578199 IL4RP24394 825 aa18.34■□□□□ 0.53
ERBB2-205ENST00000578199 AKAP5P24588 427 aa18.34■□□□□ 0.53
ERBB2-205ENST00000578199 PCK1P35558 622 aa18.34■□□□□ 0.53
ERBB2-205ENST00000578199 IL9RQ01113 521 aa18.34■□□□□ 0.53
ERBB2-205ENST00000578199 PRAMEF19Q5SWL8 479 aa18.34■□□□□ 0.53
ERBB2-205ENST00000578199 PALM2Q8IXS6 379 aa18.34■□□□□ 0.53
ERBB2-205ENST00000578199 FITM2Q8N6M3 262 aa18.34■□□□□ 0.53
ERBB2-205ENST00000578199 CLEC4CQ8WTT0 213 aa18.34■□□□□ 0.53
ERBB2-205ENST00000578199 FAXDC2Q96IV6 333 aa18.34■□□□□ 0.53
ERBB2-205ENST00000578199 OSMRQ99650 979 aa18.34■□□□□ 0.53
ERBB2-205ENST00000578199 RBM47A0AV96 593 aaKnown RBP18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms