RNA–Protein interactions for RNA: ENST00000577716.5

RNF43-203, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 4,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-203ENST00000577716 BTKQ06187 659 aa11.3□□□□□ -0.6
RNF43-203ENST00000577716 CAPRIN1Q14444 709 aaKnown RBP11.3□□□□□ -0.6
RNF43-203ENST00000577716 PCSK7Q16549 785 aa11.3□□□□□ -0.6
RNF43-203ENST00000577716 NAPEPLDQ6IQ20 393 aa11.3□□□□□ -0.6
RNF43-203ENST00000577716 FAM131BQ86XD5 332 aa11.3□□□□□ -0.6
RNF43-203ENST00000577716 ZSWIM2Q8NEG5 633 aa11.3□□□□□ -0.6
RNF43-203ENST00000577716 ZC3H15Q8WU90 426 aaKnown RBP11.3□□□□□ -0.6
RNF43-203ENST00000577716 SHC3Q92529 594 aa11.3□□□□□ -0.6
RNF43-203ENST00000577716 EGFL8Q99944 293 aa11.3□□□□□ -0.6
RNF43-203ENST00000577716 TTYH3Q9C0H2 523 aa11.3□□□□□ -0.6
RNF43-203ENST00000577716 IKZF4Q9H2S9 585 aa11.3□□□□□ -0.6
RNF43-203ENST00000577716 F8VP50 259 aa11.3□□□□□ -0.6
RNF43-203ENST00000577716 M0QYT0 321 aa11.3□□□□□ -0.6
RNF43-203ENST00000577716 FCHO1O14526 889 aa11.3□□□□□ -0.6
RNF43-203ENST00000577716 NPTXRO95502 500 aa11.3□□□□□ -0.6
RNF43-203ENST00000577716 FLT3P36888 993 aa11.3□□□□□ -0.6
RNF43-203ENST00000577716 RPL10AP62906 217 aaKnown RBP11.3□□□□□ -0.6
RNF43-203ENST00000577716 DSG1Q02413 1049 aa11.3□□□□□ -0.6
RNF43-203ENST00000577716 INPP5AQ14642 412 aa11.3□□□□□ -0.6
RNF43-203ENST00000577716 FAM71AQ8IYT1 594 aa11.3□□□□□ -0.6
RNF43-203ENST00000577716 PCYOX1LQ8NBM8 494 aa11.3□□□□□ -0.6
RNF43-203ENST00000577716 NKX2-3Q8TAU0 364 aa11.3□□□□□ -0.6
RNF43-203ENST00000577716 ZNF75CPQ92670 426 aaPredicted RBP11.3□□□□□ -0.6
RNF43-203ENST00000577716 PRCCQ92733 491 aaPredicted RBP11.3□□□□□ -0.6
RNF43-203ENST00000577716 SH3GL2Q99962 352 aa11.3□□□□□ -0.6
RNF43-203ENST00000577716 HSD17B14Q9BPX1 270 aa11.3□□□□□ -0.6
RNF43-203ENST00000577716 STX18Q9P2W9 335 aaKnown RBP11.3□□□□□ -0.6
RNF43-203ENST00000577716 HACL1Q9UJ83 578 aa11.3□□□□□ -0.6
RNF43-203ENST00000577716 NCANO14594 1321 aa11.3□□□□□ -0.6
RNF43-203ENST00000577716 KBTBD13C9JR72 458 aa11.3□□□□□ -0.6
RNF43-203ENST00000577716 RBAK-RBAKDNI3L0D1 243 aa11.3□□□□□ -0.6
RNF43-203ENST00000577716 CSDE1O75534 798 aaKnown RBP11.3□□□□□ -0.6
RNF43-203ENST00000577716 NPY5RQ15761 445 aa11.3□□□□□ -0.6
RNF43-203ENST00000577716 NUP93Q8N1F7 819 aa11.3□□□□□ -0.6
RNF43-203ENST00000577716 ZCCHC9Q8N567 271 aaKnown RBP11.3□□□□□ -0.6
RNF43-203ENST00000577716 THAP11Q96EK4 314 aa11.3□□□□□ -0.6
RNF43-203ENST00000577716 HIC2Q96JB3 615 aa11.3□□□□□ -0.6
RNF43-203ENST00000577716 WDR18Q9BV38 432 aa11.3□□□□□ -0.6
RNF43-203ENST00000577716 MYLK2Q9H1R3 596 aa11.3□□□□□ -0.6
RNF43-203ENST00000577716 DTNAQ9Y4J8 743 aa11.3□□□□□ -0.6
RNF43-203ENST00000577716 SLC25A27O95847 323 aa11.3□□□□□ -0.6
RNF43-203ENST00000577716 CXCL8P10145 99 aa11.3□□□□□ -0.6
RNF43-203ENST00000577716 NCAM1P13591 858 aa11.3□□□□□ -0.6
RNF43-203ENST00000577716 MARSP56192 900 aaKnown RBP11.3□□□□□ -0.6
RNF43-203ENST00000577716 ZCWPW2Q504Y3 356 aa11.3□□□□□ -0.6
RNF43-203ENST00000577716 C6orf10Q5SRN2 563 aa11.3□□□□□ -0.6
RNF43-203ENST00000577716 SNX30Q5VWJ9 437 aa11.3□□□□□ -0.6
RNF43-203ENST00000577716 NIPA1Q7RTP0 329 aa11.3□□□□□ -0.6
RNF43-203ENST00000577716 PRUNE1Q86TP1 453 aa11.3□□□□□ -0.6
RNF43-203ENST00000577716 CCNJLQ8IV13 435 aa11.3□□□□□ -0.6
RNF43-203ENST00000577716 SLC9A9Q8IVB4 645 aa11.3□□□□□ -0.6
RNF43-203ENST00000577716 TMEM176AQ96HP8 235 aa11.3□□□□□ -0.6
RNF43-203ENST00000577716 DDIT4Q9NX09 232 aa11.3□□□□□ -0.6
RNF43-203ENST00000577716 NOL4O94818 638 aa11.29□□□□□ -0.6
RNF43-203ENST00000577716 ADRB2P07550 413 aa11.29□□□□□ -0.6
RNF43-203ENST00000577716 CYP2C9P11712 490 aa11.29□□□□□ -0.6
RNF43-203ENST00000577716 SOX11P35716 441 aa11.29□□□□□ -0.6
RNF43-203ENST00000577716 CDC42EP1Q00587 391 aa11.29□□□□□ -0.6
RNF43-203ENST00000577716 MTFR1Q15390 333 aa11.29□□□□□ -0.6
RNF43-203ENST00000577716 DACT2Q5SW24 774 aa11.29□□□□□ -0.6
RNF43-203ENST00000577716 EXOC3L1Q86VI1 746 aa11.29□□□□□ -0.6
RNF43-203ENST00000577716 TSPAN17Q96FV3 270 aa11.29□□□□□ -0.6
RNF43-203ENST00000577716 NSMCE4AQ9NXX6 385 aa11.29□□□□□ -0.6
RNF43-203ENST00000577716 HACD3Q9P035 362 aa11.29□□□□□ -0.6
RNF43-203ENST00000577716 DCDC2Q9UHG0 476 aa11.29□□□□□ -0.6
RNF43-203ENST00000577716 STAG3L1P0CL83 205 aa11.29□□□□□ -0.6
RNF43-203ENST00000577716 RALBP11234 206 aa11.29□□□□□ -0.6
RNF43-203ENST00000577716 HOXA10P31260 410 aaPredicted RBP11.29□□□□□ -0.6
RNF43-203ENST00000577716 HADHAP40939 763 aa11.29□□□□□ -0.6
RNF43-203ENST00000577716 FMO1Q01740 532 aa11.29□□□□□ -0.6
RNF43-203ENST00000577716 WASHC2DQ5SRD0 308 aa11.29□□□□□ -0.6
RNF43-203ENST00000577716 KATNAL2Q8IYT4 538 aa11.29□□□□□ -0.6
RNF43-203ENST00000577716 CERS5Q8N5B7 392 aa11.29□□□□□ -0.6
RNF43-203ENST00000577716 AGAP11Q8TF27 550 aa11.29□□□□□ -0.6
RNF43-203ENST00000577716 APOL2Q9BQE5 337 aa11.29□□□□□ -0.6
RNF43-203ENST00000577716 ARMCX1Q9P291 453 aa11.29□□□□□ -0.6
RNF43-203ENST00000577716 TAGLN3Q9UI15 199 aa11.29□□□□□ -0.6
RNF43-203ENST00000577716 PMPCBO75439 489 aa11.29□□□□□ -0.6
RNF43-203ENST00000577716 KRT16P08779 473 aa11.29□□□□□ -0.6
RNF43-203ENST00000577716 DPEP1P16444 411 aa11.29□□□□□ -0.6
RNF43-203ENST00000577716 CDH8P55286 799 aa11.29□□□□□ -0.6
RNF43-203ENST00000577716 KCNJ2P63252 427 aa11.29□□□□□ -0.6
RNF43-203ENST00000577716 NFIL3Q16649 462 aa11.29□□□□□ -0.6
RNF43-203ENST00000577716 HYIQ5T013 277 aa11.29□□□□□ -0.6
RNF43-203ENST00000577716 PURBQ96QR8 312 aaKnown RBP11.29□□□□□ -0.6
RNF43-203ENST00000577716 LRRC19Q9H756 370 aa11.29□□□□□ -0.6
RNF43-203ENST00000577716 C10orf88Q9H8K7 445 aa11.29□□□□□ -0.6
RNF43-203ENST00000577716 AP4E1Q9UPM8 1137 aa11.29□□□□□ -0.6
RNF43-203ENST00000577716 FAM208AQ9UK61 1670 aaKnown RBP11.29□□□□□ -0.6
RNF43-203ENST00000577716 AGPSO00116 658 aa11.28□□□□□ -0.6
RNF43-203ENST00000577716 OPLAHO14841 1288 aa11.28□□□□□ -0.6
RNF43-203ENST00000577716 HNRNPCP07910 306 aaKnown RBP eCLIP11.28□□□□□ -0.64e-8■■□□□ 11.8
RNF43-203ENST00000577716 SERPINB5P36952 375 aa11.28□□□□□ -0.6
RNF43-203ENST00000577716 BMT2Q1RMZ1 405 aa11.28□□□□□ -0.6
RNF43-203ENST00000577716 TRMT5Q32P41 509 aaKnown RBP11.28□□□□□ -0.6
RNF43-203ENST00000577716 ATP13A4Q4VNC1 1196 aa11.28□□□□□ -0.6
RNF43-203ENST00000577716 IZUMO2Q6UXV1 221 aa11.28□□□□□ -0.6
RNF43-203ENST00000577716 C15orf52Q6ZUT6 534 aaKnown RBP11.28□□□□□ -0.6
RNF43-203ENST00000577716 TAS2R42Q7RTR8 314 aa11.28□□□□□ -0.6
RNF43-203ENST00000577716 TMPRSS6Q8IU80 811 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms