RNA–Protein interactions for RNA: ENST00000577667.1

PPP4R1-205, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 4

Gene PPP4R1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-205	ENST00000577667	DIS3L	Q8TF46	1054 aa	Known RBP	4.24	□□□□□ -1.73
PPP4R1-205	ENST00000577667	RPL36AL	Q969Q0	106 aa	Known RBP	4.24	□□□□□ -1.73
PPP4R1-205	ENST00000577667	MRGPRX1	Q96LB2	322 aa		4.24	□□□□□ -1.73
PPP4R1-205	ENST00000577667	SH2D3A	Q9BRG2	576 aa		4.24	□□□□□ -1.73
PPP4R1-205	ENST00000577667	RGS17	Q9UGC6	210 aa	Predicted RBP	4.24	□□□□□ -1.73
PPP4R1-205	ENST00000577667	MRPS17	Q9Y2R5	130 aa	Known RBP	4.24	□□□□□ -1.73
PPP4R1-205	ENST00000577667	NOP58	Q9Y2X3	529 aa	Known RBP	4.24	□□□□□ -1.73
PPP4R1-205	ENST00000577667	CLTC	Q00610	1675 aa	Known RBP	4.24	□□□□□ -1.73
PPP4R1-205	ENST00000577667	ITSN2	Q9NZM3	1697 aa		4.24	□□□□□ -1.73
PPP4R1-205	ENST00000577667	ARHGAP5	Q13017	1502 aa		4.24	□□□□□ -1.73
PPP4R1-205	ENST00000577667	POLR1A	O95602	1720 aa	Predicted RBP	4.24	□□□□□ -1.73
PPP4R1-205	ENST00000577667	NEURL4	Q96JN8	1562 aa		4.23	□□□□□ -1.73
PPP4R1-205	ENST00000577667	ABCC1	P33527	1531 aa		4.23	□□□□□ -1.73
PPP4R1-205	ENST00000577667	MYO1C	O00159	1063 aa		4.23	□□□□□ -1.73
PPP4R1-205	ENST00000577667	MYO1F	O00160	1098 aa		4.23	□□□□□ -1.73
PPP4R1-205	ENST00000577667	TP73	O15350	636 aa		4.23	□□□□□ -1.73
PPP4R1-205	ENST00000577667	TOM1	O60784	492 aa		4.23	□□□□□ -1.73
PPP4R1-205	ENST00000577667	TUBB4A	P04350	444 aa		4.23	□□□□□ -1.73
PPP4R1-205	ENST00000577667	LRPAP1	P30533	357 aa		4.23	□□□□□ -1.73
PPP4R1-205	ENST00000577667	PDE6C	P51160	858 aa		4.23	□□□□□ -1.73
PPP4R1-205	ENST00000577667	MYO1E	Q12965	1108 aa		4.23	□□□□□ -1.73
PPP4R1-205	ENST00000577667	GTF2H3	Q13889	308 aa		4.23	□□□□□ -1.73
PPP4R1-205	ENST00000577667	FGL2	Q14314	439 aa		4.23	□□□□□ -1.73
PPP4R1-205	ENST00000577667	SUPT20HL1	Q3ZLR7	823 aa		4.23	□□□□□ -1.73
PPP4R1-205	ENST00000577667	SLC18B1	Q6NT16	456 aa		4.23	□□□□□ -1.73
PPP4R1-205	ENST00000577667	TRIM72	Q6ZMU5	477 aa		4.23	□□□□□ -1.73
PPP4R1-205	ENST00000577667		Q6ZWC4	215 aa		4.23	□□□□□ -1.73
PPP4R1-205	ENST00000577667	ZNF280B	Q86YH2	543 aa		4.23	□□□□□ -1.73
PPP4R1-205	ENST00000577667	DENND1C	Q8IV53	801 aa		4.23	□□□□□ -1.73
PPP4R1-205	ENST00000577667	PNLDC1	Q8NA58	520 aa	Known RBP	4.23	□□□□□ -1.73
PPP4R1-205	ENST00000577667	SOCS4	Q8WXH5	440 aa		4.23	□□□□□ -1.73
PPP4R1-205	ENST00000577667	P2RX7	Q99572	595 aa	Known RBP	4.23	□□□□□ -1.73
PPP4R1-205	ENST00000577667	QTRT1	Q9BXR0	403 aa	Known RBP	4.23	□□□□□ -1.73
PPP4R1-205	ENST00000577667	CXorf36	Q9H7Y0	433 aa		4.23	□□□□□ -1.73
PPP4R1-205	ENST00000577667	PIH1D1	Q9NWS0	290 aa	Known RBP	4.23	□□□□□ -1.73
PPP4R1-205	ENST00000577667	BTBD3	Q9Y2F9	522 aa		4.23	□□□□□ -1.73
PPP4R1-205	ENST00000577667	LRRIQ1	Q96JM4	1722 aa		4.23	□□□□□ -1.73
PPP4R1-205	ENST00000577667	SHANK2	Q9UPX8	1470 aa		4.23	□□□□□ -1.73
PPP4R1-205	ENST00000577667	VWDE	Q8N2E2	1590 aa		4.23	□□□□□ -1.73
PPP4R1-205	ENST00000577667	KAT6A	Q92794	2004 aa		4.22	□□□□□ -1.73
PPP4R1-205	ENST00000577667	STRCP1	A6NGW2	1772 aa		4.22	□□□□□ -1.73
PPP4R1-205	ENST00000577667	PTPRK	Q15262	1439 aa		4.22	□□□□□ -1.73
PPP4R1-205	ENST00000577667	CPS1	P31327	1500 aa		4.22	□□□□□ -1.73
PPP4R1-205	ENST00000577667	DNMT1	P26358	1616 aa	Known RBP	4.22	□□□□□ -1.73
PPP4R1-205	ENST00000577667		A0A088AWK7	358 aa		4.22	□□□□□ -1.73
PPP4R1-205	ENST00000577667	AP1G1	O43747	822 aa		4.22	□□□□□ -1.73
PPP4R1-205	ENST00000577667	ALDH1L1	O75891	902 aa		4.22	□□□□□ -1.73
PPP4R1-205	ENST00000577667	TJP3	O95049	919 aa		4.22	□□□□□ -1.73
PPP4R1-205	ENST00000577667	TH	P07101	528 aa		4.22	□□□□□ -1.73
PPP4R1-205	ENST00000577667	CSF1R	P07333	972 aa		4.22	□□□□□ -1.73
PPP4R1-205	ENST00000577667	CYP2C9	P11712	490 aa		4.22	□□□□□ -1.73
PPP4R1-205	ENST00000577667	XRCC6	P12956	609 aa	Known RBP eCLIP	4.22	□□□□□ -1.73
PPP4R1-205	ENST00000577667	HTR1B	P28222	390 aa		4.22	□□□□□ -1.73
PPP4R1-205	ENST00000577667	CTGF	P29279	349 aa		4.22	□□□□□ -1.73
PPP4R1-205	ENST00000577667	WNT3	P56703	355 aa		4.22	□□□□□ -1.73
PPP4R1-205	ENST00000577667	GPSM2	P81274	684 aa		4.22	□□□□□ -1.73
PPP4R1-205	ENST00000577667	KRT17	Q04695	432 aa		4.22	□□□□□ -1.73
PPP4R1-205	ENST00000577667	PIN1	Q13526	163 aa	Predicted RBP	4.22	□□□□□ -1.73
PPP4R1-205	ENST00000577667	C11orf87	Q6NUJ2	197 aa		4.22	□□□□□ -1.73
PPP4R1-205	ENST00000577667	KIRREL2	Q6UWL6	708 aa		4.22	□□□□□ -1.73
PPP4R1-205	ENST00000577667	CHSY1	Q86X52	802 aa		4.22	□□□□□ -1.73
PPP4R1-205	ENST00000577667	DNAJC5G	Q8N7S2	189 aa		4.22	□□□□□ -1.73
PPP4R1-205	ENST00000577667	ZNF366	Q8N895	744 aa		4.22	□□□□□ -1.73
PPP4R1-205	ENST00000577667		Q8N9P0	234 aa	Predicted RBP	4.22	□□□□□ -1.73
PPP4R1-205	ENST00000577667	OSCP1	Q8WVF1	389 aa		4.22	□□□□□ -1.73
PPP4R1-205	ENST00000577667	DAZAP1	Q96EP5	407 aa	Known RBP	4.22	□□□□□ -1.73
PPP4R1-205	ENST00000577667	MESP1	Q9BRJ9	268 aa		4.22	□□□□□ -1.73
PPP4R1-205	ENST00000577667	RHOBTB2	Q9BYZ6	727 aa		4.22	□□□□□ -1.73
PPP4R1-205	ENST00000577667	BHMT2	Q9H2M3	363 aa		4.22	□□□□□ -1.73
PPP4R1-205	ENST00000577667	NMRK2	Q9NPI5	230 aa		4.22	□□□□□ -1.73
PPP4R1-205	ENST00000577667	PREX2	Q70Z35	1606 aa		4.21	□□□□□ -1.73
PPP4R1-205	ENST00000577667	SETD1A	O15047	1707 aa	Known RBP	4.21	□□□□□ -1.73
PPP4R1-205	ENST00000577667	CDC42BPA	Q5VT25	1732 aa		4.21	□□□□□ -1.73
PPP4R1-205	ENST00000577667		H3BML4	177 aa		4.21	□□□□□ -1.74
PPP4R1-205	ENST00000577667		H7C1Q1	480 aa		4.21	□□□□□ -1.74
PPP4R1-205	ENST00000577667	PDE8B	O95263	885 aa		4.21	□□□□□ -1.74
PPP4R1-205	ENST00000577667	NCL	P19338	710 aa	Known RBP	4.21	□□□□□ -1.74
PPP4R1-205	ENST00000577667	ADORA2A	P29274	412 aa		4.21	□□□□□ -1.74
PPP4R1-205	ENST00000577667	PTGER1	P34995	402 aa		4.21	□□□□□ -1.74
PPP4R1-205	ENST00000577667	TTF1	Q15361	905 aa	Predicted RBP	4.21	□□□□□ -1.74
PPP4R1-205	ENST00000577667	ZIK1	Q3SY52	487 aa	Predicted RBP	4.21	□□□□□ -1.74
PPP4R1-205	ENST00000577667	MGAT5B	Q3V5L5	792 aa		4.21	□□□□□ -1.74
PPP4R1-205	ENST00000577667	LMBRD2	Q68DH5	695 aa	Predicted RBP	4.21	□□□□□ -1.74
PPP4R1-205	ENST00000577667	SLC9A4	Q6AI14	798 aa		4.21	□□□□□ -1.74
PPP4R1-205	ENST00000577667	FCRL6	Q6DN72	434 aa		4.21	□□□□□ -1.74
PPP4R1-205	ENST00000577667	SLC2A7	Q6PXP3	512 aa		4.21	□□□□□ -1.74
PPP4R1-205	ENST00000577667	CATSPERG	Q6ZRH7	1159 aa		4.21	□□□□□ -1.74
PPP4R1-205	ENST00000577667	DAAM2	Q86T65	1068 aa		4.21	□□□□□ -1.74
PPP4R1-205	ENST00000577667	SLC15A4	Q8N697	577 aa		4.21	□□□□□ -1.74
PPP4R1-205	ENST00000577667	ABHD11	Q8NFV4	315 aa		4.21	□□□□□ -1.74
PPP4R1-205	ENST00000577667	DENND1A	Q8TEH3	1009 aa		4.21	□□□□□ -1.74
PPP4R1-205	ENST00000577667	RITA1	Q96K30	269 aa		4.21	□□□□□ -1.74
PPP4R1-205	ENST00000577667	LRGUK	Q96M69	825 aa		4.21	□□□□□ -1.74
PPP4R1-205	ENST00000577667	C5orf34	Q96MH7	638 aa		4.21	□□□□□ -1.74
PPP4R1-205	ENST00000577667	ASB2	Q96Q27	587 aa		4.21	□□□□□ -1.74
PPP4R1-205	ENST00000577667	TRIM54	Q9BYV2	358 aa		4.21	□□□□□ -1.74
PPP4R1-205	ENST00000577667	GABBR1	Q9UBS5	961 aa		4.21	□□□□□ -1.74
PPP4R1-205	ENST00000577667	PNMA8B	Q9ULN7	279 aa	Predicted RBP	4.21	□□□□□ -1.74
PPP4R1-205	ENST00000577667	GABRQ	Q9UN88	632 aa		4.21	□□□□□ -1.74
PPP4R1-205	ENST00000577667	PLXNC1	O60486	1568 aa		4.21	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms