RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 CCSER1Q9C0I3 900 aa6.32□□□□□ -1.4
SMG6-219ENST00000575663 TMEM60Q9H2L4 133 aa6.32□□□□□ -1.4
SMG6-219ENST00000575663 IL21RQ9HBE5 538 aa6.32□□□□□ -1.4
SMG6-219ENST00000575663 GJB4Q9NTQ9 266 aa6.32□□□□□ -1.4
SMG6-219ENST00000575663 DDX19AQ9NUU7 478 aaKnown RBP6.32□□□□□ -1.4
SMG6-219ENST00000575663 TRPM5Q9NZQ8 1165 aa6.32□□□□□ -1.4
SMG6-219ENST00000575663 TBC1D14Q9P2M4 693 aa6.32□□□□□ -1.4
SMG6-219ENST00000575663 FTSJ1Q9UET6 329 aa6.32□□□□□ -1.4
SMG6-219ENST00000575663 DNMT3LQ9UJW3 386 aa6.32□□□□□ -1.4
SMG6-219ENST00000575663 KIAA1024Q9UPX6 916 aa6.32□□□□□ -1.4
SMG6-219ENST00000575663 FNDC3AQ9Y2H6 1198 aaKnown RBP6.32□□□□□ -1.4
SMG6-219ENST00000575663 DERAQ9Y315 318 aa6.32□□□□□ -1.4
SMG6-219ENST00000575663 PCDHB6Q9Y5E3 794 aa6.32□□□□□ -1.4
SMG6-219ENST00000575663 CYP46A1Q9Y6A2 500 aa6.32□□□□□ -1.4
SMG6-219ENST00000575663 KIAA1549LQ6ZVL6 1849 aa6.32□□□□□ -1.4
SMG6-219ENST00000575663 TNRC6BQ9UPQ9 1833 aaKnown RBP6.32□□□□□ -1.4
SMG6-219ENST00000575663 ABCA7Q8IZY2 2146 aa6.31□□□□□ -1.4
SMG6-219ENST00000575663 APC2O95996 2303 aa6.31□□□□□ -1.4
SMG6-219ENST00000575663 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.31□□□□□ -1.4
SMG6-219ENST00000575663 A0A1W2PQF6 199 aa6.31□□□□□ -1.4
SMG6-219ENST00000575663 ANO9A1A5B4 782 aa6.31□□□□□ -1.4
SMG6-219ENST00000575663 KPNA7A9QM74 516 aa6.31□□□□□ -1.4
SMG6-219ENST00000575663 B8ZZF3 427 aa6.31□□□□□ -1.4
SMG6-219ENST00000575663 PIRO00625 290 aa6.31□□□□□ -1.4
SMG6-219ENST00000575663 OGTO15294 1046 aa6.31□□□□□ -1.4
SMG6-219ENST00000575663 BCAT2O15382 392 aaPredicted RBP6.31□□□□□ -1.4
SMG6-219ENST00000575663 TLX3O43711 291 aaPredicted RBP6.31□□□□□ -1.4
SMG6-219ENST00000575663 CHRM1P11229 460 aaPredicted RBP6.31□□□□□ -1.4
SMG6-219ENST00000575663 CDK4P11802 303 aa6.31□□□□□ -1.4
SMG6-219ENST00000575663 PLS3P13797 630 aa6.31□□□□□ -1.4
SMG6-219ENST00000575663 JUPP14923 745 aa6.31□□□□□ -1.4
SMG6-219ENST00000575663 CYP2F1P24903 491 aa6.31□□□□□ -1.4
SMG6-219ENST00000575663 ANXA13P27216 316 aa6.31□□□□□ -1.4
SMG6-219ENST00000575663 MAOBP27338 520 aa6.31□□□□□ -1.4
SMG6-219ENST00000575663 PNPLA4P41247 253 aa6.31□□□□□ -1.4
SMG6-219ENST00000575663 IL12RB1P42701 662 aa6.31□□□□□ -1.4
SMG6-219ENST00000575663 PPP3CCP48454 512 aa6.31□□□□□ -1.4
SMG6-219ENST00000575663 CCT8P50990 548 aa6.31□□□□□ -1.4
SMG6-219ENST00000575663 UCNP55089 124 aa6.31□□□□□ -1.4
SMG6-219ENST00000575663 SLC7A9P82251 487 aa6.31□□□□□ -1.4
SMG6-219ENST00000575663 MESP2Q0VG99 397 aa6.31□□□□□ -1.4
SMG6-219ENST00000575663 HLA-BQ31612 363 aa6.31□□□□□ -1.4
SMG6-219ENST00000575663 CFAP221Q4G0U5 840 aa6.31□□□□□ -1.4
SMG6-219ENST00000575663 INTS6LQ5JSJ4 861 aaKnown RBP6.31□□□□□ -1.4
SMG6-219ENST00000575663 BROXQ5VW32 411 aa6.31□□□□□ -1.4
SMG6-219ENST00000575663 DBX2Q6ZNG2 339 aa6.31□□□□□ -1.4
SMG6-219ENST00000575663 C4orf50Q6ZRC1 276 aa6.31□□□□□ -1.4
SMG6-219ENST00000575663 CENPQQ7L2Z9 268 aaPredicted RBP6.31□□□□□ -1.4
SMG6-219ENST00000575663 SCN4BQ8IWT1 228 aa6.31□□□□□ -1.4
SMG6-219ENST00000575663 DIS3L2Q8IYB7 885 aaKnown RBP6.31□□□□□ -1.4
SMG6-219ENST00000575663 DAW1Q8N136 415 aa6.31□□□□□ -1.4
SMG6-219ENST00000575663 TMEM161BQ8NDZ6 487 aa6.31□□□□□ -1.4
SMG6-219ENST00000575663 CADM4Q8NFZ8 388 aa6.31□□□□□ -1.4
SMG6-219ENST00000575663 SNX29Q8TEQ0 813 aa6.31□□□□□ -1.4
SMG6-219ENST00000575663 IPO4Q8TEX9 1081 aaKnown RBP6.31□□□□□ -1.4
SMG6-219ENST00000575663 SPIRE2Q8WWL2 714 aa6.31□□□□□ -1.4
SMG6-219ENST00000575663 DNASE2BQ8WZ79 361 aa6.31□□□□□ -1.4
SMG6-219ENST00000575663 OTUB2Q96DC9 234 aa6.31□□□□□ -1.4
SMG6-219ENST00000575663 CEP295NLQ96MC4 621 aa6.31□□□□□ -1.4
SMG6-219ENST00000575663 ACBD6Q9BR61 282 aa6.31□□□□□ -1.4
SMG6-219ENST00000575663 TMLHEQ9NVH6 421 aa6.31□□□□□ -1.4
SMG6-219ENST00000575663 LARSQ9P2J5 1176 aaKnown RBP6.31□□□□□ -1.4
SMG6-219ENST00000575663 DEC1Q9P2X7 70 aa6.31□□□□□ -1.4
SMG6-219ENST00000575663 ORC3Q9UBD5 711 aaPredicted RBP6.31□□□□□ -1.4
SMG6-219ENST00000575663 LRWD1Q9UFC0 647 aa6.31□□□□□ -1.4
SMG6-219ENST00000575663 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.31□□□□□ -1.4
SMG6-219ENST00000575663 DNM3Q9UQ16 869 aa6.31□□□□□ -1.4
SMG6-219ENST00000575663 C2CD2Q9Y426 696 aa6.31□□□□□ -1.4
SMG6-219ENST00000575663 CPQQ9Y646 472 aa6.31□□□□□ -1.4
SMG6-219ENST00000575663 KALRNO60229 2985 aa6.31□□□□□ -1.4
SMG6-219ENST00000575663 ACACAQ13085 2346 aa6.31□□□□□ -1.4
SMG6-219ENST00000575663 TSC2P49815 1807 aa6.3□□□□□ -1.4
SMG6-219ENST00000575663 GFRA2O00451 464 aa6.3□□□□□ -1.4
SMG6-219ENST00000575663 WNT7AO00755 349 aa6.3□□□□□ -1.4
SMG6-219ENST00000575663 HOXC11O43248 304 aaPredicted RBP6.3□□□□□ -1.4
SMG6-219ENST00000575663 SLC28A2O43868 658 aa6.3□□□□□ -1.4
SMG6-219ENST00000575663 HUS1O60921 280 aa6.3□□□□□ -1.4
SMG6-219ENST00000575663 RFPL3O75679 317 aa6.3□□□□□ -1.4
SMG6-219ENST00000575663 REC8O95072 547 aa6.3□□□□□ -1.4
SMG6-219ENST00000575663 ADRB2P07550 413 aa6.3□□□□□ -1.4
SMG6-219ENST00000575663 MAPTP10636 758 aaKnown RBP6.3□□□□□ -1.4
SMG6-219ENST00000575663 C6P13671 934 aa6.3□□□□□ -1.4
SMG6-219ENST00000575663 SCP2P22307 547 aa6.3□□□□□ -1.4
SMG6-219ENST00000575663 GUCY2CP25092 1073 aa6.3□□□□□ -1.4
SMG6-219ENST00000575663 PCSK1P29120 753 aa6.3□□□□□ -1.4
SMG6-219ENST00000575663 ACTN2P35609 894 aa6.3□□□□□ -1.4
SMG6-219ENST00000575663 WASP42768 502 aa6.3□□□□□ -1.4
SMG6-219ENST00000575663 FXR2P51116 673 aaKnown RBP eCLIP6.3□□□□□ -1.4
SMG6-219ENST00000575663 AFF3P51826 1226 aaKnown RBP6.3□□□□□ -1.4
SMG6-219ENST00000575663 TMPRSS3P57727 454 aa6.3□□□□□ -1.4
SMG6-219ENST00000575663 TLE3Q04726 772 aa6.3□□□□□ -1.4
SMG6-219ENST00000575663 MAPK7Q13164 816 aa6.3□□□□□ -1.4
SMG6-219ENST00000575663 PDIA5Q14554 519 aa6.3□□□□□ -1.4
SMG6-219ENST00000575663 STARD3Q14849 445 aa6.3□□□□□ -1.4
SMG6-219ENST00000575663 SF3A1Q15459 793 aaKnown RBP6.3□□□□□ -1.4
SMG6-219ENST00000575663 TEAD4Q15561 434 aa6.3□□□□□ -1.4
SMG6-219ENST00000575663 PTPRNQ16849 979 aa6.3□□□□□ -1.4
SMG6-219ENST00000575663 LY6G5CQ5SRR4 150 aa6.3□□□□□ -1.4
SMG6-219ENST00000575663 DCAF12L1Q5VU92 463 aa6.3□□□□□ -1.4
SMG6-219ENST00000575663 EGFLAMQ63HQ2 1017 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms