RNA–Protein interactions for RNA: ENST00000575560.5

CALCOCO2-227, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 540 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-227ENST00000575560 ITGA11Q9UKX5 1188 aa10.67□□□□□ -0.7
CALCOCO2-227ENST00000575560 SLC6A14Q9UN76 642 aa10.67□□□□□ -0.7
CALCOCO2-227ENST00000575560 SNX9Q9Y5X1 595 aa10.67□□□□□ -0.7
CALCOCO2-227ENST00000575560 SLC9A3R1O14745 358 aaPredicted RBP10.66□□□□□ -0.7
CALCOCO2-227ENST00000575560 LDHAP00338 332 aaKnown RBP10.66□□□□□ -0.7
CALCOCO2-227ENST00000575560 SERPINF2P08697 491 aa10.66□□□□□ -0.7
CALCOCO2-227ENST00000575560 BDNFP23560 247 aa10.66□□□□□ -0.7
CALCOCO2-227ENST00000575560 GRIA2P42262 883 aa10.66□□□□□ -0.7
CALCOCO2-227ENST00000575560 PPP3CCP48454 512 aa10.66□□□□□ -0.7
CALCOCO2-227ENST00000575560 NOP14P78316 857 aaKnown RBP10.66□□□□□ -0.7
CALCOCO2-227ENST00000575560 RBP5P82980 135 aa10.66□□□□□ -0.7
CALCOCO2-227ENST00000575560 GRIN1Q05586 938 aa10.66□□□□□ -0.7
CALCOCO2-227ENST00000575560 DUOXA1Q1HG43 343 aa10.66□□□□□ -0.7
CALCOCO2-227ENST00000575560 EOGTQ5NDL2 527 aa10.66□□□□□ -0.7
CALCOCO2-227ENST00000575560 C4orf50Q6ZRC1 276 aa10.66□□□□□ -0.7
CALCOCO2-227ENST00000575560 DENND5BQ6ZUT9 1274 aa10.66□□□□□ -0.7
CALCOCO2-227ENST00000575560 RAB44Q7Z6P3 723 aaPredicted RBP10.66□□□□□ -0.7
CALCOCO2-227ENST00000575560 C12orf40Q86WS4 652 aa10.66□□□□□ -0.7
CALCOCO2-227ENST00000575560 PROSER1Q86XN7 944 aa10.66□□□□□ -0.7
CALCOCO2-227ENST00000575560 PHTF2Q8N3S3 785 aa10.66□□□□□ -0.7
CALCOCO2-227ENST00000575560 CHCHD4Q8N4Q1 142 aa10.66□□□□□ -0.7
CALCOCO2-227ENST00000575560 KCNV2Q8TDN2 545 aa10.66□□□□□ -0.7
CALCOCO2-227ENST00000575560 KBTBD7Q8WVZ9 684 aa10.66□□□□□ -0.7
CALCOCO2-227ENST00000575560 LARP4BQ92615 738 aaKnown RBP10.66□□□□□ -0.7
CALCOCO2-227ENST00000575560 FAM84AQ96KN4 292 aa10.66□□□□□ -0.7
CALCOCO2-227ENST00000575560 CRTAC1Q9NQ79 661 aa10.66□□□□□ -0.7
CALCOCO2-227ENST00000575560 FSCN3Q9NQT6 498 aa10.66□□□□□ -0.7
CALCOCO2-227ENST00000575560 CDH9Q9ULB4 789 aa10.66□□□□□ -0.7
CALCOCO2-227ENST00000575560 IGSF10Q6WRI0 2623 aa10.66□□□□□ -0.7
CALCOCO2-227ENST00000575560 PI4KAP42356 2102 aa10.66□□□□□ -0.7
CALCOCO2-227ENST00000575560 TNRC6BQ9UPQ9 1833 aaKnown RBP10.65□□□□□ -0.7
CALCOCO2-227ENST00000575560 AP5Z1O43299 807 aa10.65□□□□□ -0.7
CALCOCO2-227ENST00000575560 OAS1P00973 400 aaKnown RBP10.65□□□□□ -0.7
CALCOCO2-227ENST00000575560 APODP05090 189 aa10.65□□□□□ -0.7
CALCOCO2-227ENST00000575560 CFIP05156 583 aa10.65□□□□□ -0.7
CALCOCO2-227ENST00000575560 CD59P13987 128 aa10.65□□□□□ -0.7
CALCOCO2-227ENST00000575560 GARTP22102 1010 aa10.65□□□□□ -0.7
CALCOCO2-227ENST00000575560 RDXP35241 583 aaKnown RBP10.65□□□□□ -0.7
CALCOCO2-227ENST00000575560 LONP1P36776 959 aaKnown RBP10.65□□□□□ -0.7
CALCOCO2-227ENST00000575560 GRIK1P39086 918 aa10.65□□□□□ -0.7
CALCOCO2-227ENST00000575560 GFPT1Q06210 699 aaPredicted RBP10.65□□□□□ -0.7
CALCOCO2-227ENST00000575560 RESTQ13127 1097 aa10.65□□□□□ -0.7
CALCOCO2-227ENST00000575560 L1TD1Q5T7N2 865 aaKnown RBP10.65□□□□□ -0.7
CALCOCO2-227ENST00000575560 SFR1Q86XK3 245 aa10.65□□□□□ -0.7
CALCOCO2-227ENST00000575560 HDDC3Q8N4P3 179 aa10.65□□□□□ -0.7
CALCOCO2-227ENST00000575560 KRI1Q8N9T8 703 aaKnown RBP10.65□□□□□ -0.7
CALCOCO2-227ENST00000575560 HMGB4Q8WW32 186 aa10.65□□□□□ -0.7
CALCOCO2-227ENST00000575560 MYLPFQ96A32 169 aa10.65□□□□□ -0.7
CALCOCO2-227ENST00000575560 SAAL1Q96ER3 474 aa10.65□□□□□ -0.7
CALCOCO2-227ENST00000575560 PDE11AQ9HCR9 933 aa10.65□□□□□ -0.7
CALCOCO2-227ENST00000575560 ZDHHC4Q9NPG8 344 aa10.65□□□□□ -0.7
CALCOCO2-227ENST00000575560 ARHGEF4Q9NR80 690 aa10.65□□□□□ -0.7
CALCOCO2-227ENST00000575560 DNAAF2Q9NVR5 837 aaKnown RBP10.65□□□□□ -0.7
CALCOCO2-227ENST00000575560 RBAKQ9NYW8 714 aaPredicted RBP10.65□□□□□ -0.7
CALCOCO2-227ENST00000575560 EHD2Q9NZN4 543 aa10.65□□□□□ -0.7
CALCOCO2-227ENST00000575560 BCCIPQ9P287 314 aaKnown RBP eCLIP10.65□□□□□ -0.7
CALCOCO2-227ENST00000575560 SEL1LQ9UBV2 794 aa10.65□□□□□ -0.7
CALCOCO2-227ENST00000575560 CIZ1Q9ULV3 898 aaPredicted RBP10.65□□□□□ -0.7
CALCOCO2-227ENST00000575560 KIF3AQ9Y496 699 aa10.65□□□□□ -0.7
CALCOCO2-227ENST00000575560 GPSM3Q9Y4H4 160 aa10.65□□□□□ -0.7
CALCOCO2-227ENST00000575560 CPQQ9Y646 472 aa10.65□□□□□ -0.7
CALCOCO2-227ENST00000575560 GCN1Q92616 2671 aaKnown RBP10.65□□□□□ -0.7
CALCOCO2-227ENST00000575560 ATXN2Q99700 1313 aaKnown RBP10.64□□□□□ -0.71
CALCOCO2-227ENST00000575560 TCRBV21S2A2A0A5A6 115 aa10.64□□□□□ -0.71
CALCOCO2-227ENST00000575560 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.64□□□□□ -0.71
CALCOCO2-227ENST00000575560 ARHGAP33O14559 1287 aa10.64□□□□□ -0.71
CALCOCO2-227ENST00000575560 SCAMP3O14828 347 aaKnown RBP10.64□□□□□ -0.71
CALCOCO2-227ENST00000575560 OPHN1O60890 802 aa10.64□□□□□ -0.71
CALCOCO2-227ENST00000575560 ADH1CP00326 375 aa10.64□□□□□ -0.71
CALCOCO2-227ENST00000575560 KRT19P08727 400 aa10.64□□□□□ -0.71
CALCOCO2-227ENST00000575560 PRR29P0C7W0 189 aa10.64□□□□□ -0.71
CALCOCO2-227ENST00000575560 ADH5P11766 374 aa10.64□□□□□ -0.71
CALCOCO2-227ENST00000575560 GABRG2P18507 467 aa10.64□□□□□ -0.71
CALCOCO2-227ENST00000575560 ATXN3P54252 364 aaPredicted RBP10.64□□□□□ -0.71
CALCOCO2-227ENST00000575560 PSMC1P62191 440 aaKnown RBP10.64□□□□□ -0.71
CALCOCO2-227ENST00000575560 SLC14A1Q13336 389 aa10.64□□□□□ -0.71
CALCOCO2-227ENST00000575560 HNRNPDQ14103 355 aaKnown RBP10.64□□□□□ -0.71
CALCOCO2-227ENST00000575560 MAPRE1Q15691 268 aaKnown RBP10.64□□□□□ -0.71
CALCOCO2-227ENST00000575560 ZNF423Q2M1K9 1284 aa10.64□□□□□ -0.71
CALCOCO2-227ENST00000575560 SLC36A4Q6YBV0 504 aa10.64□□□□□ -0.71
CALCOCO2-227ENST00000575560 DYMQ7RTS9 669 aa10.64□□□□□ -0.71
CALCOCO2-227ENST00000575560 ETFBKMTQ8IXQ9 262 aa10.64□□□□□ -0.71
CALCOCO2-227ENST00000575560 PGBD3Q8N328 593 aa10.64□□□□□ -0.71
CALCOCO2-227ENST00000575560 MINDY1Q8N5J2 469 aa10.64□□□□□ -0.71
CALCOCO2-227ENST00000575560 MYCBPAPQ8TBZ2 947 aa10.64□□□□□ -0.71
CALCOCO2-227ENST00000575560 DNAJC19Q96DA6 116 aa10.64□□□□□ -0.71
CALCOCO2-227ENST00000575560 PCED1BQ96HM7 432 aa10.64□□□□□ -0.71
CALCOCO2-227ENST00000575560 C8orf48Q96LL4 319 aa10.64□□□□□ -0.71
CALCOCO2-227ENST00000575560 ACCSQ96QU6 501 aa10.64□□□□□ -0.71
CALCOCO2-227ENST00000575560 SYT15Q9BQS2 421 aa10.64□□□□□ -0.71
CALCOCO2-227ENST00000575560 GTPBP2Q9BX10 602 aaKnown RBP10.64□□□□□ -0.71
CALCOCO2-227ENST00000575560 MTMR12Q9C0I1 747 aa10.64□□□□□ -0.71
CALCOCO2-227ENST00000575560 MRPL44Q9H9J2 332 aaKnown RBP10.64□□□□□ -0.71
CALCOCO2-227ENST00000575560 SMPD4Q9NXE4 827 aa10.64□□□□□ -0.71
CALCOCO2-227ENST00000575560 CFAP97Q9P2B7 532 aa10.64□□□□□ -0.71
CALCOCO2-227ENST00000575560 TBC1D14Q9P2M4 693 aa10.64□□□□□ -0.71
CALCOCO2-227ENST00000575560 HCN2Q9UL51 889 aa10.64□□□□□ -0.71
CALCOCO2-227ENST00000575560 EXOC7Q9UPT5 735 aa10.64□□□□□ -0.71
CALCOCO2-227ENST00000575560 BPTFQ12830 3046 aa10.64□□□□□ -0.71
CALCOCO2-227ENST00000575560 HELZP42694 1942 aaKnown RBP10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms