RNA–Protein interactions for RNA: ENST00000574848.5

LITAF-216, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-216ENST00000574848 PRKCSHP14314 528 aaPredicted RBP11.26□□□□□ -0.61
LITAF-216ENST00000574848 MTIF2P46199 727 aaKnown RBP11.26□□□□□ -0.61
LITAF-216ENST00000574848 CDR1P51861 262 aa11.26□□□□□ -0.61
LITAF-216ENST00000574848 CCZ1BP86790 482 aa11.26□□□□□ -0.61
LITAF-216ENST00000574848 CCZ1P86791 482 aaPredicted RBP11.26□□□□□ -0.61
LITAF-216ENST00000574848 LRMPQ12912 555 aa11.26□□□□□ -0.61
LITAF-216ENST00000574848 TBX2Q13207 712 aaPredicted RBP11.26□□□□□ -0.61
LITAF-216ENST00000574848 TRPC3Q13507 836 aa11.26□□□□□ -0.61
LITAF-216ENST00000574848 NCOA4Q13772 614 aa11.26□□□□□ -0.61
LITAF-216ENST00000574848 C1orf220Q5T0J3 134 aa11.26□□□□□ -0.61
LITAF-216ENST00000574848 FKBP15Q5T1M5 1219 aa11.26□□□□□ -0.61
LITAF-216ENST00000574848 SDHAF4Q5VUM1 108 aa11.26□□□□□ -0.61
LITAF-216ENST00000574848 ASCL5Q7RTU5 278 aa11.26□□□□□ -0.61
LITAF-216ENST00000574848 MON1AQ86VX9 555 aa11.26□□□□□ -0.61
LITAF-216ENST00000574848 YAF2Q8IY57 180 aa11.26□□□□□ -0.61
LITAF-216ENST00000574848 STKLD1Q8NE28 680 aa11.26□□□□□ -0.61
LITAF-216ENST00000574848 FAM3CQ92520 227 aa11.26□□□□□ -0.61
LITAF-216ENST00000574848 MRPS31Q92665 395 aaKnown RBP11.26□□□□□ -0.61
LITAF-216ENST00000574848 NELL1Q92832 810 aa11.26□□□□□ -0.61
LITAF-216ENST00000574848 NKD2Q969F2 451 aaPredicted RBP11.26□□□□□ -0.61
LITAF-216ENST00000574848 MMS19Q96T76 1030 aa11.26□□□□□ -0.61
LITAF-216ENST00000574848 TTLL2Q9BWV7 592 aa11.26□□□□□ -0.61
LITAF-216ENST00000574848 CACNA1IQ9P0X4 2223 aa11.25□□□□□ -0.61
LITAF-216ENST00000574848 ZNF638Q14966 1978 aaKnown RBP11.25□□□□□ -0.61
LITAF-216ENST00000574848 GOLGA6L9A6NEM1 432 aa11.25□□□□□ -0.61
LITAF-216ENST00000574848 LGALS16A8MUM7 142 aa11.25□□□□□ -0.61
LITAF-216ENST00000574848 TULP1O00294 542 aaPredicted RBP11.25□□□□□ -0.61
LITAF-216ENST00000574848 DPYSL4O14531 572 aa11.25□□□□□ -0.61
LITAF-216ENST00000574848 TRIM66O15016 1216 aa11.25□□□□□ -0.61
LITAF-216ENST00000574848 ARHGAP6O43182 974 aa11.25□□□□□ -0.61
LITAF-216ENST00000574848 STX10O60499 249 aa11.25□□□□□ -0.61
LITAF-216ENST00000574848 ASS1P00966 412 aaKnown RBP11.25□□□□□ -0.61
LITAF-216ENST00000574848 TCF3P15923 654 aa11.25□□□□□ -0.61
LITAF-216ENST00000574848 PFKLP17858 780 aa11.25□□□□□ -0.61
LITAF-216ENST00000574848 CTHP32929 405 aa11.25□□□□□ -0.61
LITAF-216ENST00000574848 GNL1P36915 607 aaPredicted RBP11.25□□□□□ -0.61
LITAF-216ENST00000574848 AVPR1AP37288 418 aa11.25□□□□□ -0.61
LITAF-216ENST00000574848 TERF1P54274 439 aa11.25□□□□□ -0.61
LITAF-216ENST00000574848 NOP14P78316 857 aaKnown RBP11.25□□□□□ -0.61
LITAF-216ENST00000574848 DLG4P78352 724 aa11.25□□□□□ -0.61
LITAF-216ENST00000574848 USP4Q13107 963 aa11.25□□□□□ -0.61
LITAF-216ENST00000574848 BIRC3Q13489 604 aa11.25□□□□□ -0.61
LITAF-216ENST00000574848 ZNF699Q32M78 642 aa11.25□□□□□ -0.61
LITAF-216ENST00000574848 EDRF1Q3B7T1 1238 aa11.25□□□□□ -0.61
LITAF-216ENST00000574848 MDH1BQ5I0G3 518 aa11.25□□□□□ -0.61
LITAF-216ENST00000574848 ANKRD40Q6AI12 368 aa11.25□□□□□ -0.61
LITAF-216ENST00000574848 ZC3H14Q6PJT7 736 aaKnown RBP11.25□□□□□ -0.61
LITAF-216ENST00000574848 APTXQ7Z2E3 356 aaKnown RBP11.25□□□□□ -0.61
LITAF-216ENST00000574848 RALGPS2Q86X27 583 aaPredicted RBP11.25□□□□□ -0.61
LITAF-216ENST00000574848 CREBRFQ8IUR6 639 aa11.25□□□□□ -0.61
LITAF-216ENST00000574848 MAB21L3Q8N8X9 362 aa11.25□□□□□ -0.61
LITAF-216ENST00000574848 B3GALNT2Q8NCR0 500 aa11.25□□□□□ -0.61
LITAF-216ENST00000574848 RIN3Q8TB24 985 aa11.25□□□□□ -0.61
LITAF-216ENST00000574848 CSGALNACT1Q8TDX6 532 aa11.25□□□□□ -0.61
LITAF-216ENST00000574848 TAF4BQ92750 862 aa11.25□□□□□ -0.61
LITAF-216ENST00000574848 USP13Q92995 863 aaPredicted RBP11.25□□□□□ -0.61
LITAF-216ENST00000574848 CNOT6LQ96LI5 555 aaKnown RBP11.25□□□□□ -0.61
LITAF-216ENST00000574848 C8orf48Q96LL4 319 aa11.25□□□□□ -0.61
LITAF-216ENST00000574848 CEP63Q96MT8 703 aa11.25□□□□□ -0.61
LITAF-216ENST00000574848 PANX2Q96RD6 677 aa11.25□□□□□ -0.61
LITAF-216ENST00000574848 FAM83CQ9BQN1 747 aa11.25□□□□□ -0.61
LITAF-216ENST00000574848 TUBGCP2Q9BSJ2 902 aa11.25□□□□□ -0.61
LITAF-216ENST00000574848 NUP58Q9BVL2 599 aa11.25□□□□□ -0.61
LITAF-216ENST00000574848 ELOVL4Q9GZR5 314 aa11.25□□□□□ -0.61
LITAF-216ENST00000574848 SNX25Q9H3E2 840 aa11.25□□□□□ -0.61
LITAF-216ENST00000574848 SMYD3Q9H7B4 428 aa11.25□□□□□ -0.61
LITAF-216ENST00000574848 TDP1Q9NUW8 608 aa11.25□□□□□ -0.61
LITAF-216ENST00000574848 TAB2Q9NYJ8 693 aa11.25□□□□□ -0.61
LITAF-216ENST00000574848 GCNT4Q9P109 453 aa11.25□□□□□ -0.61
LITAF-216ENST00000574848 MAGED2Q9UNF1 606 aaPredicted RBP11.25□□□□□ -0.61
LITAF-216ENST00000574848 CCL26Q9Y258 94 aa11.25□□□□□ -0.61
LITAF-216ENST00000574848 FRMD4BQ9Y2L6 1034 aa11.25□□□□□ -0.61
LITAF-216ENST00000574848 ZFHX2Q9C0A1 2572 aaPredicted RBP11.25□□□□□ -0.61
LITAF-216ENST00000574848 SPECC1L-ADORA2AF8WAN1 911 aa11.24□□□□□ -0.61
LITAF-216ENST00000574848 PES1O00541 588 aaKnown RBP11.24□□□□□ -0.61
LITAF-216ENST00000574848 ZSCAN12O43309 604 aa11.24□□□□□ -0.61
LITAF-216ENST00000574848 LAMTOR5O43504 91 aa11.24□□□□□ -0.61
LITAF-216ENST00000574848 PHACTR2O75167 634 aa11.24□□□□□ -0.61
LITAF-216ENST00000574848 AKAP3O75969 853 aa11.24□□□□□ -0.61
LITAF-216ENST00000574848 PDGFRBP09619 1106 aa11.24□□□□□ -0.61
LITAF-216ENST00000574848 CHRNB1P11230 501 aa11.24□□□□□ -0.61
LITAF-216ENST00000574848 TDGF1P13385 188 aa11.24□□□□□ -0.61
LITAF-216ENST00000574848 PTPN1P18031 435 aaKnown RBP11.24□□□□□ -0.61
LITAF-216ENST00000574848 BDNFP23560 247 aa11.24□□□□□ -0.61
LITAF-216ENST00000574848 NR2F2P24468 414 aa11.24□□□□□ -0.61
LITAF-216ENST00000574848 PBX1P40424 430 aa11.24□□□□□ -0.61
LITAF-216ENST00000574848 PMS1P54277 932 aaKnown RBP11.24□□□□□ -0.61
LITAF-216ENST00000574848 FKBP3Q00688 224 aaKnown RBP11.24□□□□□ -0.61
LITAF-216ENST00000574848 CYP27A1Q02318 531 aa11.24□□□□□ -0.61
LITAF-216ENST00000574848 UBXN1Q04323 297 aa11.24□□□□□ -0.61
LITAF-216ENST00000574848 ZNF77Q15935 545 aa11.24□□□□□ -0.61
LITAF-216ENST00000574848 TSR1Q2NL82 804 aaKnown RBP11.24□□□□□ -0.61
LITAF-216ENST00000574848 ZNF667Q5HYK9 610 aa11.24□□□□□ -0.61
LITAF-216ENST00000574848 WDR44Q5JSH3 913 aa11.24□□□□□ -0.61
LITAF-216ENST00000574848 TXNDC8Q6A555 127 aa11.24□□□□□ -0.61
LITAF-216ENST00000574848 DENND5BQ6ZUT9 1274 aa11.24□□□□□ -0.61
LITAF-216ENST00000574848 INTS8Q75QN2 995 aaKnown RBP11.24□□□□□ -0.61
LITAF-216ENST00000574848 SV2AQ7L0J3 742 aa11.24□□□□□ -0.61
LITAF-216ENST00000574848 SCN4BQ8IWT1 228 aa11.24□□□□□ -0.61
LITAF-216ENST00000574848 OR6B3Q8NGW1 331 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms