RNA–Protein interactions for RNA: ENST00000574799.5

CCDC40-212, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best)

Gene CCDC40, Length 3,795 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-212ENST00000574799 SSTR3P32745 418 aaPredicted RBP9.98□□□□□ -0.81
CCDC40-212ENST00000574799 GJA8P48165 433 aa9.98□□□□□ -0.81
CCDC40-212ENST00000574799 MTTPP55157 894 aa9.98□□□□□ -0.81
CCDC40-212ENST00000574799 NCKAP1LP55160 1127 aa9.98□□□□□ -0.81
CCDC40-212ENST00000574799 FOLH1Q04609 750 aa9.98□□□□□ -0.81
CCDC40-212ENST00000574799 EFTUD2Q15029 972 aaKnown RBP eCLIP9.98□□□□□ -0.81
CCDC40-212ENST00000574799 CYP1B1Q16678 543 aa9.98□□□□□ -0.81
CCDC40-212ENST00000574799 BMT2Q1RMZ1 405 aa9.98□□□□□ -0.81
CCDC40-212ENST00000574799 RINT1Q6NUQ1 792 aa9.98□□□□□ -0.81
CCDC40-212ENST00000574799 WDR75Q8IWA0 830 aaKnown RBP9.98□□□□□ -0.81
CCDC40-212ENST00000574799 ELMO3Q96BJ8 720 aa9.98□□□□□ -0.81
CCDC40-212ENST00000574799 ALKBH8Q96BT7 664 aaKnown RBP9.98□□□□□ -0.81
CCDC40-212ENST00000574799 GRID1Q9ULK0 1009 aa9.98□□□□□ -0.81
CCDC40-212ENST00000574799 FSCN2O14926 492 aa9.98□□□□□ -0.81
CCDC40-212ENST00000574799 TM7SF2O76062 418 aa9.98□□□□□ -0.81
CCDC40-212ENST00000574799 SRGAP2CP0DJJ0 459 aa9.98□□□□□ -0.81
CCDC40-212ENST00000574799 SRGAP2BP0DMP2 458 aa9.98□□□□□ -0.81
CCDC40-212ENST00000574799 PTK7Q13308 1070 aa9.98□□□□□ -0.81
CCDC40-212ENST00000574799 ANKRD20A4Q4UJ75 823 aa9.98□□□□□ -0.81
CCDC40-212ENST00000574799 SFT2D3Q587I9 215 aa9.98□□□□□ -0.81
CCDC40-212ENST00000574799 RARS2Q5T160 578 aaKnown RBP9.98□□□□□ -0.81
CCDC40-212ENST00000574799 C16orf87Q6PH81 154 aa9.98□□□□□ -0.81
CCDC40-212ENST00000574799 DCUN1D2Q6PH85 259 aa9.98□□□□□ -0.81
CCDC40-212ENST00000574799 PASD1Q8IV76 773 aa9.98□□□□□ -0.81
CCDC40-212ENST00000574799 ARHGEF19Q8IW93 802 aa9.98□□□□□ -0.81
CCDC40-212ENST00000574799 NIM1KQ8IY84 436 aa9.98□□□□□ -0.81
CCDC40-212ENST00000574799 ZCCHC9Q8N567 271 aaKnown RBP9.98□□□□□ -0.81
CCDC40-212ENST00000574799 PPM1NQ8N819 430 aa9.98□□□□□ -0.81
CCDC40-212ENST00000574799 CPA5Q8WXQ8 436 aa9.98□□□□□ -0.81
CCDC40-212ENST00000574799 FAM20AQ96MK3 541 aa9.98□□□□□ -0.81
CCDC40-212ENST00000574799 PANX3Q96QZ0 392 aa9.98□□□□□ -0.81
CCDC40-212ENST00000574799 HAPLN3Q96S86 360 aa9.98□□□□□ -0.81
CCDC40-212ENST00000574799 C11orf70Q9BRQ4 267 aa9.98□□□□□ -0.81
CCDC40-212ENST00000574799 ZNF341Q9BYN7 854 aa9.98□□□□□ -0.81
CCDC40-212ENST00000574799 WDR11Q9BZH6 1224 aa9.98□□□□□ -0.81
CCDC40-212ENST00000574799 SLC38A10Q9HBR0 1119 aa9.98□□□□□ -0.81
CCDC40-212ENST00000574799 HACL1Q9UJ83 578 aa9.98□□□□□ -0.81
CCDC40-212ENST00000574799 SOX13Q9UN79 622 aa9.98□□□□□ -0.81
CCDC40-212ENST00000574799 APOBEC2Q9Y235 224 aaKnown RBP9.98□□□□□ -0.81
CCDC40-212ENST00000574799 IPO5O00410 1097 aaKnown RBP9.98□□□□□ -0.81
CCDC40-212ENST00000574799 NOP56O00567 594 aaKnown RBP9.98□□□□□ -0.81
CCDC40-212ENST00000574799 SLC26A4O43511 780 aa9.98□□□□□ -0.81
CCDC40-212ENST00000574799 E2F6O75461 281 aa9.98□□□□□ -0.81
CCDC40-212ENST00000574799 ICAM1P05362 532 aa9.98□□□□□ -0.81
CCDC40-212ENST00000574799 VAMP7P51809 220 aa9.98□□□□□ -0.81
CCDC40-212ENST00000574799 OASLQ15646 514 aaKnown RBP9.98□□□□□ -0.81
CCDC40-212ENST00000574799 CHI3L2Q15782 390 aa9.98□□□□□ -0.81
CCDC40-212ENST00000574799 LGSNQ5TDP6 509 aa9.98□□□□□ -0.81
CCDC40-212ENST00000574799 PRAMEF18Q5VWM3 479 aa9.98□□□□□ -0.81
CCDC40-212ENST00000574799 NANOGNBQ7Z5D8 188 aa9.98□□□□□ -0.81
CCDC40-212ENST00000574799 RHOT1Q8IXI2 618 aa9.98□□□□□ -0.81
CCDC40-212ENST00000574799 NT5C1BQ96P26 610 aa9.98□□□□□ -0.81
CCDC40-212ENST00000574799 DCUN1D5Q9BTE7 237 aa9.98□□□□□ -0.81
CCDC40-212ENST00000574799 FOXP3Q9BZS1 431 aa9.98□□□□□ -0.81
CCDC40-212ENST00000574799 GLT8D2Q9H1C3 349 aa9.98□□□□□ -0.81
CCDC40-212ENST00000574799 VPS11Q9H270 941 aa9.98□□□□□ -0.81
CCDC40-212ENST00000574799 TLE6Q9H808 572 aa9.98□□□□□ -0.81
CCDC40-212ENST00000574799 SLC24A2Q9UI40 661 aa9.98□□□□□ -0.81
CCDC40-212ENST00000574799 ZNF510Q9Y2H8 683 aa9.98□□□□□ -0.81
CCDC40-212ENST00000574799 DDX39AO00148 427 aaKnown RBP9.97□□□□□ -0.81
CCDC40-212ENST00000574799 ZNF862O60290 1169 aa9.97□□□□□ -0.81
CCDC40-212ENST00000574799 TCEA3O75764 348 aa9.97□□□□□ -0.81
CCDC40-212ENST00000574799 RGS20O76081 388 aa9.97□□□□□ -0.81
CCDC40-212ENST00000574799 SLC1A1P43005 524 aa9.97□□□□□ -0.81
CCDC40-212ENST00000574799 BAG6P46379 1132 aa9.97□□□□□ -0.81
CCDC40-212ENST00000574799 GMPSP49915 693 aaPredicted RBP9.97□□□□□ -0.81
CCDC40-212ENST00000574799 PSMD7P51665 324 aa9.97□□□□□ -0.81
CCDC40-212ENST00000574799 ACTR3P61158 418 aa9.97□□□□□ -0.81
CCDC40-212ENST00000574799 NAA20P61599 178 aa9.97□□□□□ -0.81
CCDC40-212ENST00000574799 CENPCQ03188 943 aa9.97□□□□□ -0.81
CCDC40-212ENST00000574799 TTLL12Q14166 644 aaPredicted RBP9.97□□□□□ -0.81
CCDC40-212ENST00000574799 NADK2Q4G0N4 442 aa9.97□□□□□ -0.81
CCDC40-212ENST00000574799 SH3D19Q5HYK7 790 aa9.97□□□□□ -0.81
CCDC40-212ENST00000574799 CIAPIN1Q6FI81 312 aa9.97□□□□□ -0.81
CCDC40-212ENST00000574799 KLHDC10Q6PID8 442 aa9.97□□□□□ -0.81
CCDC40-212ENST00000574799 NOP9Q86U38 636 aaKnown RBP9.97□□□□□ -0.81
CCDC40-212ENST00000574799 TRPM4Q8TD43 1214 aa9.97□□□□□ -0.81
CCDC40-212ENST00000574799 GIPC3Q8TF64 312 aa9.97□□□□□ -0.81
CCDC40-212ENST00000574799 CFAP36Q96G28 342 aa9.97□□□□□ -0.81
CCDC40-212ENST00000574799 TBC1D23Q9NUY8 699 aa9.97□□□□□ -0.81
CCDC40-212ENST00000574799 PACSIN3Q9UKS6 424 aa9.97□□□□□ -0.81
CCDC40-212ENST00000574799 NENFQ9UMX5 172 aa9.97□□□□□ -0.81
CCDC40-212ENST00000574799 ADAMTS5Q9UNA0 930 aa9.97□□□□□ -0.81
CCDC40-212ENST00000574799 TM9SF1O15321 606 aa9.97□□□□□ -0.81
CCDC40-212ENST00000574799 MAGEC1O60732 1142 aa9.97□□□□□ -0.81
CCDC40-212ENST00000574799 CFBP00751 764 aa9.97□□□□□ -0.81
CCDC40-212ENST00000574799 ESRRGP62508 458 aa9.97□□□□□ -0.81
CCDC40-212ENST00000574799 E2F7Q96AV8 911 aa9.97□□□□□ -0.81
CCDC40-212ENST00000574799 THAP11Q96EK4 314 aa9.97□□□□□ -0.81
CCDC40-212ENST00000574799 NUF2Q9BZD4 464 aa9.97□□□□□ -0.81
CCDC40-212ENST00000574799 TSPYL2Q9H2G4 693 aaPredicted RBP9.97□□□□□ -0.81
CCDC40-212ENST00000574799 S100A14Q9HCY8 104 aa9.97□□□□□ -0.81
CCDC40-212ENST00000574799 PRR5-ARHGAP8B1AHC4 643 aa9.97□□□□□ -0.81
CCDC40-212ENST00000574799 TRMUO75648 421 aaKnown RBP9.97□□□□□ -0.81
CCDC40-212ENST00000574799 PROCP04070 461 aa9.97□□□□□ -0.81
CCDC40-212ENST00000574799 ARHGAP8P85298 464 aa9.97□□□□□ -0.81
CCDC40-212ENST00000574799 UBAP2LQ14157 1087 aaKnown RBP9.97□□□□□ -0.81
CCDC40-212ENST00000574799 LPIN1Q14693 890 aa9.97□□□□□ -0.81
CCDC40-212ENST00000574799 CCNG2Q16589 344 aa9.97□□□□□ -0.81
CCDC40-212ENST00000574799 DALRD3Q5D0E6 543 aaKnown RBP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms