RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 DRAP1Q14919 205 aaPredicted RBP13.48□□□□□ -0.25
TRAPPC1-206ENST00000573989 MEA1Q16626 185 aa13.48□□□□□ -0.25
TRAPPC1-206ENST00000573989 APTXQ7Z2E3 356 aaKnown RBP13.48□□□□□ -0.25
TRAPPC1-206ENST00000573989 FMNL3Q8IVF7 1028 aa13.48□□□□□ -0.25
TRAPPC1-206ENST00000573989 ZMIZ2Q8NF64 920 aa13.48□□□□□ -0.25
TRAPPC1-206ENST00000573989 ZSCAN18Q8TBC5 510 aaPredicted RBP13.48□□□□□ -0.25
TRAPPC1-206ENST00000573989 SMARCD2Q92925 531 aa13.48□□□□□ -0.25
TRAPPC1-206ENST00000573989 ASB16Q96NS5 453 aa13.48□□□□□ -0.25
TRAPPC1-206ENST00000573989 KCNK12Q9HB15 430 aa13.48□□□□□ -0.25
TRAPPC1-206ENST00000573989 TMEM30AQ9NV96 361 aa13.48□□□□□ -0.25
TRAPPC1-206ENST00000573989 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.48□□□□□ -0.25
TRAPPC1-206ENST00000573989 SIK3Q9Y2K2 1263 aa13.48□□□□□ -0.25
TRAPPC1-206ENST00000573989 FHOD1Q9Y613 1164 aa13.48□□□□□ -0.25
TRAPPC1-206ENST00000573989 TTC28Q96AY4 2481 aa13.48□□□□□ -0.25
TRAPPC1-206ENST00000573989 NCANO14594 1321 aa13.47□□□□□ -0.25
TRAPPC1-206ENST00000573989 VCANP13611 3396 aa13.47□□□□□ -0.25
TRAPPC1-206ENST00000573989 A0A1B0GTH6 734 aa13.47□□□□□ -0.25
TRAPPC1-206ENST00000573989 ANHXE9PGG2 379 aa13.47□□□□□ -0.25
TRAPPC1-206ENST00000573989 M0QYV0 167 aa13.47□□□□□ -0.25
TRAPPC1-206ENST00000573989 FOXN3O00409 490 aaPredicted RBP13.47□□□□□ -0.25
TRAPPC1-206ENST00000573989 TNFRSF10BO14763 440 aa13.47□□□□□ -0.25
TRAPPC1-206ENST00000573989 ECI2O75521 394 aa13.47□□□□□ -0.25
TRAPPC1-206ENST00000573989 ABL1P00519 1130 aa13.47□□□□□ -0.25
TRAPPC1-206ENST00000573989 WEE1P30291 646 aa13.47□□□□□ -0.25
TRAPPC1-206ENST00000573989 KRT9P35527 623 aa13.47□□□□□ -0.25
TRAPPC1-206ENST00000573989 PLA2G4AP47712 749 aa13.47□□□□□ -0.25
TRAPPC1-206ENST00000573989 PSEN1P49768 467 aa13.47□□□□□ -0.25
TRAPPC1-206ENST00000573989 UBASH3AP57075 661 aa13.47□□□□□ -0.25
TRAPPC1-206ENST00000573989 POLR2FP61218 127 aaKnown RBP13.47□□□□□ -0.25
TRAPPC1-206ENST00000573989 USP46P62068 366 aa13.47□□□□□ -0.25
TRAPPC1-206ENST00000573989 FANCCQ00597 558 aa13.47□□□□□ -0.25
TRAPPC1-206ENST00000573989 TDGQ13569 410 aa13.47□□□□□ -0.25
TRAPPC1-206ENST00000573989 HTR4Q13639 388 aa13.47□□□□□ -0.25
TRAPPC1-206ENST00000573989 PTPN21Q16825 1174 aa13.47□□□□□ -0.25
TRAPPC1-206ENST00000573989 CACNA2D4Q7Z3S7 1137 aa13.47□□□□□ -0.25
TRAPPC1-206ENST00000573989 MON1AQ86VX9 555 aa13.47□□□□□ -0.25
TRAPPC1-206ENST00000573989 TTC30AQ86WT1 665 aa13.47□□□□□ -0.25
TRAPPC1-206ENST00000573989 UBALD2Q8IYN6 164 aa13.47□□□□□ -0.25
TRAPPC1-206ENST00000573989 FAM71AQ8IYT1 594 aa13.47□□□□□ -0.25
TRAPPC1-206ENST00000573989 CMTM8Q8IZV2 173 aa13.47□□□□□ -0.25
TRAPPC1-206ENST00000573989 MAB21L3Q8N8X9 362 aa13.47□□□□□ -0.25
TRAPPC1-206ENST00000573989 SCAMP5Q8TAC9 235 aa13.47□□□□□ -0.25
TRAPPC1-206ENST00000573989 ZNF606Q8WXB4 792 aa13.47□□□□□ -0.25
TRAPPC1-206ENST00000573989 TFAP2BQ92481 460 aa13.47□□□□□ -0.25
TRAPPC1-206ENST00000573989 ELSPBP1Q96BH3 223 aa13.47□□□□□ -0.25
TRAPPC1-206ENST00000573989 NAA15Q9BXJ9 866 aaKnown RBP13.47□□□□□ -0.25
TRAPPC1-206ENST00000573989 GANQ9H2C0 597 aa13.47□□□□□ -0.25
TRAPPC1-206ENST00000573989 TRPV4Q9HBA0 871 aa13.47□□□□□ -0.25
TRAPPC1-206ENST00000573989 LRRC4Q9HBW1 653 aa13.47□□□□□ -0.25
TRAPPC1-206ENST00000573989 TRPC7Q9HCX4 862 aa13.47□□□□□ -0.25
TRAPPC1-206ENST00000573989 CD320Q9NPF0 282 aa13.47□□□□□ -0.25
TRAPPC1-206ENST00000573989 TLR8Q9NR97 1041 aaKnown RBP13.47□□□□□ -0.25
TRAPPC1-206ENST00000573989 IL37Q9NZH6 218 aa13.47□□□□□ -0.25
TRAPPC1-206ENST00000573989 CEP83Q9Y592 693 aa13.47□□□□□ -0.25
TRAPPC1-206ENST00000573989 TRAV19A0A0A6YYK7 116 aa13.46□□□□□ -0.25
TRAPPC1-206ENST00000573989 A0A1W2PQC6 194 aa13.46□□□□□ -0.25
TRAPPC1-206ENST00000573989 FAM92AA1XBS5 289 aa13.46□□□□□ -0.25
TRAPPC1-206ENST00000573989 F8VZ95 297 aa13.46□□□□□ -0.25
TRAPPC1-206ENST00000573989 CYP26A1O43174 497 aa13.46□□□□□ -0.25
TRAPPC1-206ENST00000573989 CBFA2T2O43439 604 aa13.46□□□□□ -0.25
TRAPPC1-206ENST00000573989 DCXO43602 365 aa13.46□□□□□ -0.25
TRAPPC1-206ENST00000573989 ASGR2P07307 311 aa13.46□□□□□ -0.25
TRAPPC1-206ENST00000573989 USP17L7P0C7H9 530 aa13.46□□□□□ -0.25
TRAPPC1-206ENST00000573989 CCDC172P0C7W6 258 aa13.46□□□□□ -0.25
TRAPPC1-206ENST00000573989 STAT1P42224 750 aa13.46□□□□□ -0.25
TRAPPC1-206ENST00000573989 KIF11P52732 1056 aa13.46□□□□□ -0.25
TRAPPC1-206ENST00000573989 SNX16P57768 344 aa13.46□□□□□ -0.25
TRAPPC1-206ENST00000573989 PDE4CQ08493 712 aa13.46□□□□□ -0.25
TRAPPC1-206ENST00000573989 FAM78AQ5JUQ0 283 aa13.46□□□□□ -0.25
TRAPPC1-206ENST00000573989 TXNDC8Q6A555 127 aa13.46□□□□□ -0.25
TRAPPC1-206ENST00000573989 DPY19L2P1Q6NXN4 242 aa13.46□□□□□ -0.25
TRAPPC1-206ENST00000573989 PARM1Q6UWI2 310 aa13.46□□□□□ -0.25
TRAPPC1-206ENST00000573989 TMEM150AQ86TG1 271 aa13.46□□□□□ -0.25
TRAPPC1-206ENST00000573989 PIGZQ86VD9 579 aa13.46□□□□□ -0.25
TRAPPC1-206ENST00000573989 ARID3BQ8IVW6 561 aaPredicted RBP13.46□□□□□ -0.25
TRAPPC1-206ENST00000573989 UBA3Q8TBC4 463 aa13.46□□□□□ -0.25
TRAPPC1-206ENST00000573989 FGF14Q92915 247 aa13.46□□□□□ -0.25
TRAPPC1-206ENST00000573989 PDCL3Q9H2J4 239 aa13.46□□□□□ -0.25
TRAPPC1-206ENST00000573989 KIF9Q9HAQ2 790 aa13.46□□□□□ -0.25
TRAPPC1-206ENST00000573989 NLRC4Q9NPP4 1024 aa13.46□□□□□ -0.25
TRAPPC1-206ENST00000573989 OBP2AQ9NY56 170 aa13.46□□□□□ -0.25
TRAPPC1-206ENST00000573989 MUTYHQ9UIF7 546 aa13.46□□□□□ -0.25
TRAPPC1-206ENST00000573989 SCML2Q9UQR0 700 aa13.46□□□□□ -0.25
TRAPPC1-206ENST00000573989 NUMBLQ9Y6R0 609 aa13.46□□□□□ -0.25
TRAPPC1-206ENST00000573989 A0A0C4DFX4 3053 aa13.46□□□□□ -0.25
TRAPPC1-206ENST00000573989 HELZP42694 1942 aaKnown RBP13.45□□□□□ -0.26
TRAPPC1-206ENST00000573989 ZNF840PA6NDX5 716 aa13.45□□□□□ -0.26
TRAPPC1-206ENST00000573989 HHLA1C9JL84 531 aa13.45□□□□□ -0.26
TRAPPC1-206ENST00000573989 DLL1O00548 723 aa13.45□□□□□ -0.26
TRAPPC1-206ENST00000573989 TEX33O43247 280 aa13.45□□□□□ -0.26
TRAPPC1-206ENST00000573989 TADA3O75528 432 aa13.45□□□□□ -0.26
TRAPPC1-206ENST00000573989 CKMP06732 381 aa13.45□□□□□ -0.26
TRAPPC1-206ENST00000573989 ACADSBP45954 432 aa13.45□□□□□ -0.26
TRAPPC1-206ENST00000573989 KLK7P49862 253 aa13.45□□□□□ -0.26
TRAPPC1-206ENST00000573989 TUBP50607 506 aa13.45□□□□□ -0.26
TRAPPC1-206ENST00000573989 NR1I3Q14994 352 aa13.45□□□□□ -0.26
TRAPPC1-206ENST00000573989 PKDCCQ504Y2 493 aa13.45□□□□□ -0.26
TRAPPC1-206ENST00000573989 STXBP5Q5T5C0 1151 aa13.45□□□□□ -0.26
TRAPPC1-206ENST00000573989 CCDC186Q7Z3E2 898 aa13.45□□□□□ -0.26
TRAPPC1-206ENST00000573989 TADA2BQ86TJ2 420 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms